Scaffold Ba1_1000178

Overview

Basic Information

• Taxon OID: 3300003535
• Scaffold ID: Ba1_1000178
• Source Dataset Name: Petroleum reservoir microbial communities from Reconcavo Basin, Brazil, analyzing oil degradation - Bahia-well BA- 1
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2782
• Total Scaffold Genes: 5
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 5 (100.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Unclassified → Unclassified → Unclassified → Petroleum Reservoir → Petroleum Reservoir Microbial Communities From Reconcavo Basin, Brazil, Analyzing Oil Degradation

Source Dataset Sampling Location

• Location Name: Brazil: State of Bahia
• Coordinates
  • Lat. (^o): -12.2
  • Long. (^o): -38.11
  • Depth (m): 500 to 1000

Associated Families

Family	Category	Number of Sequences	3D Structure?
F023356	Metagenome / Metatranscriptome	210	Y
F048287	Metagenome / Metatranscriptome	148	N

Sequences

Protein ID	Family	RBS	Sequence
Ba1_10001781	F023356	AGGAG	MSENSLKKAVLKSRASAAEAEVMSTELKKSKVITLRVEEPLFKAIEAQAELWNVKPAETIRRVLRFYFLPGALEMQLRGESEKFWKGELTPEALREYMVFTLEATGKLSSSALFLKGEASRLSEALEGKLSEALKEEREGAEP*
Ba1_10001785	F048287	GAGG	MIDTLKLMLSDYEVSPESSVRVQPASYEVATGEKVEYPLFRNEAGTFYGSKAYLNTENWNLTLKPLPAGNRGVGAFLQFSVPKNYYGSNYFSVGEAGTRAALKKVEGELVQNGVFTNLEEAELSRIDTFKNIEPEEPFSSYFSLFSLLKARRAQQRGYGTTFLVANSSQEFCVYDKLQEMREHGLETSELPETMRFEHRALKKEKVRTLYGFTRVNELFHGGYEVVKEKQVESWKNSLFSFSAEEVVVLGSKQLEQEMKAFQEKFGSNWFQYFLKSYGAYSLAKFAGKEVVRAALENLNSERTKVWRTMKLLEEAERELLVLTREEGSSKTLGELYEELRGKVCELAGRN*