Basic Information | |
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Taxon OID | 3300002821 Open in IMG/M |
Scaffold ID | Iso3TCLC_10026679 Open in IMG/M |
Source Dataset Name | Iso-alkanes.Hi.seq-Iso3T |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | McGill University |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 3490 |
Total Scaffold Genes | 12 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 7 (58.33%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Thermotogae → Thermotogae → Thermotogales → Thermotogaceae → unclassified Thermotogaceae → Thermotogaceae bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
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Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | Athabasca Oil Sands, Alberta Canada | |||||||
Coordinates | Lat. (o) | 57.02 | Long. (o) | -111.65 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F028459 | Metagenome / Metatranscriptome | 191 | Y |
Protein ID | Family | RBS | Sequence |
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Iso3TCLC_1002667911 | F028459 | N/A | LVEANRDRLHAWAKEGKSYFWMAKQIGLGERSASAVSKWFLWQGIRRKAER* |
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