Basic Information | |
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Taxon OID | 3300002703 Open in IMG/M |
Scaffold ID | draft_11050980 Open in IMG/M |
Source Dataset Name | Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes from Oil sands tailings Tailings Pond 5 - 2012TP5 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | McGill University |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2028 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 5 (100.00%) |
Novel Protein Genes | 3 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 3 (100.00%) |
Associated Families | 3 |
Taxonomy | |
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All Organisms → Viruses → Predicted Viral | (Source: DeepVirFinder) |
Source Dataset Ecosystem |
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Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | Suncor Tailings Pond 6, Northern Alberta, Canada | |||||||
Coordinates | Lat. (o) | 57.02 | Long. (o) | -111.55 | Alt. (m) | Depth (m) | 5 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F002260 | Metagenome / Metatranscriptome | 577 | Y |
F003807 | Metagenome | 467 | Y |
F058142 | Metagenome / Metatranscriptome | 135 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
draft_110509801 | F002260 | AGGAG | VSVPYQRISNATVQDIMFYDPAAERRAEALDVDWDRYFKVASQEWLYKMEFGWWQNYCDTVVGATYYNNLPNGSLISAFNPNLLIKNDQTLIRLDVFGAILVFYESLVTDVSNMNEVDVKNYEFAKERCDREWTKAQELSNWYDLYQDSPNGPTSKLEENYLADVNYFNGDRRYF* |
draft_110509802 | F058142 | AGGAG | MPQIDYAVANEPYVTEDQIIAVIKRDIPKQWNIPVYSDFPSDVEAVRYGIYVSDVHLDERNPHQLGIQYCASIYHAYDTFSITYVSYQDDPYNRAVNAIIGNLVTALKDDGKQLFDGYFERNFDQVRTYGPTQSEKHTWTFRLLRMEFNT* |
draft_110509804 | F003807 | AGGAG | MSENIWLRTKEEKLRSLINDEAKMMPMLDNMQATIRQMKAKQAFRLALLNQLLEDLDNQE |
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