Scaffold JGI24539J26755_10112927

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold JGI24539J26755_10112927

Scaffold JGI24539J26755_10112927

Overview

Basic Information
Taxon OID	3300002186 Open in IMG/M
Scaffold ID	JGI24539J26755_10112927 Open in IMG/M
Source Dataset Name	Marine eukaryotic phytoplankton communities from the Norwegian Sea - 10m ARK-5M Metagenome
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	786
Total Scaffold Genes	2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (50.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Eukaryotic Phytoplankton Communities From The Norwegian Sea, Arctic And Atlantic Ocean

Source Dataset Sampling Location
Location Name	Norwegian Sea, Atlantic Ocean
Coordinates	Lat. (^o)	71.2008	Long. (^o)	8.8666	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F043077	Metagenome	157	Y

Sequences

Protein ID	Family	RBS	Sequence
JGI24539J26755_101129271	F043077	GGA	MFKLKFFITLIVLLCTTAFAQITGPKVGEVIGQMGTTWNERDGETQNTSMGYELQMKDFLQTGEDGG

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