Scaffold JGI24540J26637_10015880

Overview

Basic Information

• Taxon OID: 3300002153
• Scaffold ID: JGI24540J26637_10015880
• Source Dataset Name: Marine eukaryotic phytoplankton communities from the Norwegian Sea - 20m ARK-7M Metagenome
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 3133
• Total Scaffold Genes: 5
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → Viruses → Varidnaviria → Bamfordvirae → Nucleocytoviricota → Megaviricetes → Algavirales → Phycodnaviridae → Prasinovirus → unclassified Prasinovirus → Micromonas sp. RCC1109 virus MpV1 (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Eukaryotic Phytoplankton Communities From The Norwegian Sea, Arctic And Atlantic Ocean

Source Dataset Sampling Location

• Location Name: Norwegian Sea, Atlantic Ocean
• Coordinates
  • Lat. (^o): 73.0188
  • Long. (^o): 9.8566

Associated Families

Family	Category	Number of Sequences	3D Structure?
F025612	Metagenome / Metatranscriptome	201	N

Sequences

Protein ID	Family	RBS	Sequence
JGI24540J26637_100158805	F025612	N/A	VVHKLMEMLDDNAQQVPEGFYLEVCNQLKNLHVAVKKTPPELDAQWRVLEEAERMLNRKAEKLKEDREHLNGCVLNYNKTATGYLEKVKKYNKAAASVKRVRAWQLAREARLDDREDNITLAQLQRQLILAE*