Scaffold S2t7BSb_10907357

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold S2t7BSb_10907357

Scaffold S2t7BSb_10907357

Overview

Basic Information
Taxon OID	3300002145 Open in IMG/M
Scaffold ID	S2t7BSb_10907357 Open in IMG/M
Source Dataset Name	S2t7BSb (114f)
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	35358
Total Scaffold Genes	41 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	6 (14.63%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Bacteria	(Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Sampling Location
Location Name
Coordinates	Lat. (^o)	57.305	Long. (^o)	20.0745	Alt. (m)		Depth (m)	1
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F002643	Metagenome / Metatranscriptome	540	Y

Sequences

Protein ID	Family	RBS	Sequence
S2t7BSb_1090735717	F002643	N/A	MKYKDLNILVASINAVIGGQETKIQKKLFKLYEKVKPFHEEYNKQRDELRLDNAATDDKNILLTDEKGEYKFNKDGVKKLTKDFEALNEKEFEFKPIEVINTNGLEKFTFLKDWTTGIEFVDEEEEEL*

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