Scaffold M2t2BS2_10309201

Overview

Basic Information

• Taxon OID: 3300002144
• Scaffold ID: M2t2BS2_10309201
• Source Dataset Name: Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t2BS2 (113f)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 3178
• Total Scaffold Genes: 13
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (7.69%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 3

Taxonomy: All Organisms → cellular organisms → Bacteria (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Sampling Location

• Location Name: Baltic Sea
• Coordinates
  • Lat. (^o): 57.305
  • Long. (^o): 20.0745

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000918	Metagenome / Metatranscriptome	834	Y
F019836	Metagenome / Metatranscriptome	227	Y
F047764	Metagenome / Metatranscriptome	149	Y

Sequences

Protein ID	Family	RBS	Sequence
M2t2BS2_103092011	F019836	N/A	MQKAELELPVKQFHRLYDLLGDLIDYEAEINVFNMENNDIDFLEDIRHELFNQIPEEKTYTDYAITGRSSNRSIQAGKLYKIVEKTSKYGFKLEVEDGEVIYCLSKNCAFLNGRDWTII
M2t2BS2_1030920111	F047764	N/A	MIKLKFNKNFKTIQLITNKNINIKIFKSYILIQSKDLETITKILDSQYLKYKLK*
M2t2BS2_103092018	F000918	N/A	MYQTNQQAWDEVTREYQDSLRRTEVCQRMFGQDNLIGLKEDQRDLFWAECRKEVF*