Scaffold M2t2BS2_10163233

Overview

Basic Information

• Taxon OID: 3300002144
• Scaffold ID: M2t2BS2_10163233
• Source Dataset Name: Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t2BS2 (113f)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 8660
• Total Scaffold Genes: 19
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 12 (63.16%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Sampling Location

• Location Name: Baltic Sea
• Coordinates
  • Lat. (^o): 57.305
  • Long. (^o): 20.0745

Associated Families

Family	Category	Number of Sequences	3D Structure?
F009144	Metagenome / Metatranscriptome	322	Y
F032881	Metagenome / Metatranscriptome	179	Y

Sequences

Protein ID	Family	RBS	Sequence
M2t2BS2_1016323312	F032881	GGA	MSNTLELVVQELQNRIGQITTQYETQMAILKVQAHEAIQEKDEQIKVLTQNNTYDQSAKKEK*
M2t2BS2_101632333	F009144	AGGAG	MFKEIDYNKHFVIGTPLVGWKADMGEEMSWLENSKQIIEKFPNAKFFTALELDSRGLQPFERVLNTLKEINGDFWTYTINDMEEEVTYRNRWIRIETGRNLIREYAQRKRILHGHHWGEDCTEENIGVVNYDAILYVDSDIILTAELIEKLFEVDHPIVSADVPAYGLRGKAVSDNPRIEEHWNTAGMLLVNSPAFYDLPWYHNDYLNLSDDPTFQSMAERLKVRVGLENLDHTYGMTWVRKDIKAEHKGQLLPVENRKIPPREI*