Scaffold M2t6FKB2_1289618

Overview

Basic Information

• Taxon OID: 3300002134
• Scaffold ID: M2t6FKB2_1289618
• Source Dataset Name: Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t6FKB2 (101f)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 8672
• Total Scaffold Genes: 25
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 22 (88.00%)
• Novel Protein Genes: 4
• Novel Protein Genes with Ribosome Binding Sites (RBS): 3 (75.00%)
• Associated Families: 4

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Sampling Location

• Location Name: Baltic Sea
• Coordinates
  • Lat. (^o): 57.305
  • Long. (^o): 20.0745
  • Depth (m): 1

Associated Families

Family	Category	Number of Sequences	3D Structure?
F025991	Metagenome / Metatranscriptome	199	Y
F028500	Metagenome / Metatranscriptome	191	Y
F028789	Metagenome / Metatranscriptome	190	Y
F088515	Metagenome / Metatranscriptome	109	N

Sequences

Protein ID	Family	RBS	Sequence
M2t6FKB2_128961814	F028500	N/A	MYEIRTIYSNLIVYRTTVRDNAVYWLECNNQEGIFKLIRVKKNDS*
M2t6FKB2_128961815	F025991	GGGGG	MRCTCCNVILTPFEATIKKVSDNSFLDMCEGCFSYISDEVKVLTREDLRSEVGTDVANYIDYEDKGELYD*
M2t6FKB2_128961822	F028789	AGGA	MTDIIGTGSVTLIRENEDGSADYQCNFPPEALAALTRLGILTALQAAIEDAKRLNPEEQDD*
M2t6FKB2_12896188	F088515	AGG	MIEQTQHHIDEATRLIKQAIMTDTLMGNDQAGYVAFLDLWESLYDLDRLIKNWDEDDEAVKRNLLSDER*