Scaffold M2t6BS2_1530780

Overview

Basic Information

• Taxon OID: 3300002132
• Scaffold ID: M2t6BS2_1530780
• Source Dataset Name: Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t6BS2 (105f)
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 25712
• Total Scaffold Genes: 52
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 22 (42.31%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Source Dataset Sampling Location

• Location Name: Baltic Sea
• Coordinates
  • Lat. (^o): 57.305
  • Long. (^o): 20.0745
  • Depth (m): 1

Associated Families

Family	Category	Number of Sequences	3D Structure?
F007054	Metagenome / Metatranscriptome	359	Y
F077491	Metagenome / Metatranscriptome	117	N
F078746	Metagenome / Metatranscriptome	116	Y

Sequences

Protein ID	Family	RBS	Sequence
M2t6BS2_153078026	F077491	N/A	MKVVETKYGIQITKPWNNEMYDHNDKVAELMKAELLIKLELAKETEDEELLRNVAKIIQPAGYGSGYEFEDIYNDAIRELEMVENYWLNEEYPYGVSKGIVPSVELEFIGY*
M2t6BS2_153078048	F078746	GAG	MSVNEWAWMPTWHHNKNIIDLHGVRHQLVEEVLENSLLGYHDTNGWEIITGNSPYMIQIVEEFLRTNGFHFYRTEDNYGRIILH*
M2t6BS2_153078051	F007054	GAG	MNNVEKFQKSIEGVKFTPPQKKIVDLILKGYTIEVVNKHHMSGGELMWRNPNSDYLEHAGKVYKAFFNVFYQIKKQTGVVLPTTGYIK*