Scaffold CSTRM48_1000091

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold CSTRM48_1000091

Scaffold CSTRM48_1000091

Overview

Basic Information
Taxon OID	3300002130 Open in IMG/M
Scaffold ID	CSTRM48_1000091 Open in IMG/M
Source Dataset Name	Wastewater microbial communities from Belvaux, Luxembourg - M48
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	18729
Total Scaffold Genes	25 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	22 (88.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Bacteria	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Engineered → Wastewater → Unclassified → Unclassified → Unclassified → Wastewater → Wastewater Microbial Communities From Belvaux, Luxembourg

Source Dataset Sampling Location
Location Name	Belvaux, Luxembourg
Coordinates	Lat. (^o)	49.506095	Long. (^o)	5.943536	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F084270	Metagenome / Metatranscriptome	112	N

Sequences

Protein ID	Family	RBS	Sequence
CSTRM48_100009115	F084270	AGGAGG	MPRQTNEKNLIFPDGFKLEISTDGTTGSAWKDVGVLAGGANLTFNWDEFYLDAGNYEGLVDKAINPTVALAPSAVWNWDPAVIKALFPGFFTSAAATSPETGTDITYAGTSNQVSLTRSKLRLTHYTDDALTTVDWQFTLHNAKIDAGASFNFKGVNEDGLDEITVSFTGKPDPASTYALFTFFKAS*

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