Scaffold CSTRM28_101259

Overview

Basic Information

• Taxon OID: 3300001754
• Scaffold ID: CSTRM28_101259
• Source Dataset Name: Wastewater microbial communities from Belvaux, Luxembourg - M28
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1920
• Total Scaffold Genes: 8
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 8 (100.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 3 (100.00%)
• Associated Families: 3

Taxonomy: All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Unclassified → Unclassified → Unclassified → Wastewater → Wastewater Microbial Communities From Belvaux, Luxembourg

Source Dataset Sampling Location

• Location Name: Belvaux, Luxembourg
• Coordinates
  • Lat. (^o): 49.506095
  • Long. (^o): 5.943536

Associated Families

Family	Category	Number of Sequences	3D Structure?
F009968	Metagenome / Metatranscriptome	310	Y
F022442	Metagenome / Metatranscriptome	214	Y
F033483	Metagenome / Metatranscriptome	177	Y

Sequences

Protein ID	Family	RBS	Sequence
CSTRM28_1012592	F009968	GAGG	MRPNSCVGCRSHYRERHWWIFEIDFCGLTGDVVGFECPIGCIDTEGCPAYERRPAWPEGAIA*
CSTRM28_1012594	F022442	AGGAGG	MTFIPAGEARLDLYTDAMLLDIGPDTFVVPLDRLADLTAHRRHEVAVSRRYWGDAPGKFCDVELGIWLRRSQTDRSLMLIEQGRVYSIPVYLVLEVKDGIRESCTISMLVTDARQLDDAHSRQTVLEV*
CSTRM28_1012595	F033483	GGAGG	VTPSDASVAIDIDGLPVVLVLPERDVELMMWLYRANRILQEGRGDE*