Scaffold Draft_10176900

Overview

Basic Information

• Taxon OID: 3300001605
• Scaffold ID: Draft_10176900
• Source Dataset Name: Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: McGill University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1326
• Total Scaffold Genes: 5
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (40.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 3

Taxonomy: All Organisms → Viruses → Predicted Viral (Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Sampling Location

• Location Name: Fort McMurray in northeastern Alberta, Canada
• Coordinates
  • Lat. (^o): 57.01116
  • Long. (^o): -111.6
  • Depth (m): 0 to .1

Associated Families

Family	Category	Number of Sequences	3D Structure?
F023571	Metagenome / Metatranscriptome	209	Y
F029725	Metagenome / Metatranscriptome	187	Y
F073464	Metagenome / Metatranscriptome	120	N

Sequences

Protein ID	Family	RBS	Sequence
Draft_101769002	F029725	N/A	MMTNRTELEFFLYEKCREDPDLLATIISEYVWNLTPEKLTELEDLIINNFGDD*
Draft_101769003	F073464	N/A	MNTKTWVVTLEIAIDETSHPRKFIPDAINECLNLEEGEDIIDYKFVCLD*
Draft_101769005	F023571	N/A	MNFSDLLFLSHEHIKGATRALHFFENGWSISVVAGDADSGLYGTIGEDTFEVAIIRPNGNMLEDVLGWQTPVQISTIMRVICMM*