Basic Information | |
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Taxon OID | 3300001605 Open in IMG/M |
Scaffold ID | Draft_10176900 Open in IMG/M |
Source Dataset Name | Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | McGill University |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1326 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (40.00%) |
Novel Protein Genes | 3 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 3 |
Taxonomy | |
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All Organisms → Viruses → Predicted Viral | (Source: DeepVirFinder) |
Source Dataset Ecosystem |
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Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | Fort McMurray in northeastern Alberta, Canada | |||||||
Coordinates | Lat. (o) | 57.01116 | Long. (o) | -111.6 | Alt. (m) | Depth (m) | 0 to .1 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F023571 | Metagenome / Metatranscriptome | 209 | Y |
F029725 | Metagenome / Metatranscriptome | 187 | Y |
F073464 | Metagenome / Metatranscriptome | 120 | N |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Draft_101769002 | F029725 | N/A | MMTNRTELEFFLYEKCREDPDLLATIISEYVWNLTPEKLTELEDLIINNFGDD* |
Draft_101769003 | F073464 | N/A | MNTKTWVVTLEIAIDETSHPRKFIPDAINECLNLEEGEDIIDYKFVCLD* |
Draft_101769005 | F023571 | N/A | MNFSDLLFLSHEHIKGATRALHFFENGWSISVVAGDADSGLYGTIGEDTFEVAIIRPNGNMLEDVLGWQTPVQISTIMRVICMM* |
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