Scaffold Draft_10073194

Overview

Basic Information

• Taxon OID: 3300001605
• Scaffold ID: Draft_10073194
• Source Dataset Name: Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: McGill University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2663
• Total Scaffold Genes: 9
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 8 (88.89%)
• Novel Protein Genes: 4
• Novel Protein Genes with Ribosome Binding Sites (RBS): 3 (75.00%)
• Associated Families: 4

Taxonomy: All Organisms → Viruses → Predicted Viral (Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Sampling Location

• Location Name: Fort McMurray in northeastern Alberta, Canada
• Coordinates
  • Lat. (^o): 57.01116
  • Long. (^o): -111.6
  • Depth (m): 0 to .1

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000403	Metagenome / Metatranscriptome	1177	Y
F012452	Metagenome	280	Y
F025683	Metagenome / Metatranscriptome	200	Y
F105039	Metagenome	100	N

Sequences

Protein ID	Family	RBS	Sequence
Draft_100731942	F025683	GGAG	MLLDLLDPETLGRLVGVIALMILGGAYGYAKGFKEGKREGMARRKAISRHMSNKVAD*
Draft_100731943	F012452	AGGTGG	MAFLDNYEGNKERTDRWNATYPDGRLQAHIVEFNAEKGYILVQAKAWRNQSEIEPAGIDYAYGFIAAYNPNMKRWFVEDTTTSALMRVMALVMGGTEKATRETMEQVEKLSTKVATADVKADYDYWTTKHGDVPSYATAAEAEQSGIPSLGSSIDEIANQLGGQLVEEKPRCDHGTRVWKTGESAKTGKAWGGYFCTEKSKANQCDPVWYQLGSTGQWVVRLP*
Draft_100731944	F000403	N/A	MSDYMEMIDLKTMTGKLLYNGEVIAEYKVDQCDKCSQITKFDSFGYQKGYDKHEKVIWFCGGCR*
Draft_100731945	F105039	GGTGG	VKIKLTPNEMCVCMVAAVKITSDKGQLLDLPRSYNNSSFMIYLSELAESIGSEWAVAKYFGLPFDPFEDKGKRKADVGAGIEVRWTKYELGQLIVYEYDRASDIAVLVTGEAPNYYIAGWIPVTMAQKPRYRHTKQPTWWVTQINLQPIENLRKSTYGHSAI*