Scaffold Draft_10000278

Overview

Basic Information

• Taxon OID: 3300001605
• Scaffold ID: Draft_10000278
• Source Dataset Name: Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: McGill University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 72112
• Total Scaffold Genes: 62
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 48 (77.42%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Sampling Location

• Location Name: Fort McMurray in northeastern Alberta, Canada
• Coordinates
  • Lat. (^o): 57.01116
  • Long. (^o): -111.6
  • Depth (m): 0 to .1

Associated Families

Family	Category	Number of Sequences	3D Structure?
F006586	Metagenome	369	Y
F011759	Metagenome / Metatranscriptome	287	Y

Sequences

Protein ID	Family	RBS	Sequence
Draft_1000027860	F011759	GGAG	MKEDLIADLWNVMSEHIPEKHKKDVAADFVNTLMDYGIKESILDNLLGIDPYLDQAIEYSLDGESYEEEDDIDYSEDEE*
Draft_100002788	F006586	GGAG	LFGLNICVMLIESEEDFKQLREQFNVWRKRFPMFKHDVYQIEQITEQHIQNYSKIMVLYRQTHNRSYIEKAQKEIDEINRVINTVEKIELMSMLSRG*