Scaffold Draft_10003742

Overview

Basic Information

• Taxon OID: 3300001580
• Scaffold ID: Draft_10003742
• Source Dataset Name: Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes from Suncor taillings pond 6 2012TP6_6
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: McGill University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 14984
• Total Scaffold Genes: 25
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 23 (92.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Sampling Location

• Location Name: Suncor Tailings Pond 6, Northern Alberta, Canada
• Coordinates
  • Lat. (^o): 57.05
  • Long. (^o): -111.55
  • Depth (m): 6

Associated Families

Family	Category	Number of Sequences	3D Structure?
F056321	Metagenome / Metatranscriptome	137	N
F093357	Metagenome	106	Y

Sequences

Protein ID	Family	RBS	Sequence
Draft_1000374213	F093357	GGA	MERIIQEKMKKFEQAWQIKRFLAERGESISSLSRKLNRPFGSVANNIYGYRANAQLQGESADFLGKPVAKLFGGAGPVRG*
Draft_1000374219	F056321	GGAG	MPHMETPAPPPIIYVRVEFYRGVKAIAKFLGVHERTAQXFLHDGKXPGKKDGTGTWVLTNLDYFXSLQR*