Scaffold Draft_10005883

Overview

Basic Information

• Taxon OID: 3300001567
• Scaffold ID: Draft_10005883
• Source Dataset Name: Hydrocarbon resource environments microbial communities from Canada and USA - Toluene degrading community from Alberta, Canada
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: McGill University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 10764
• Total Scaffold Genes: 20
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 10 (50.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → unclassified Candidatus Methanofastidiosa → Candidatus Methanofastidiosa archaeon (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Sampling Location

• Location Name: Northern Alberta, Canada
• Coordinates
  • Lat. (^o): 54.0
  • Long. (^o): -114.0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F053881	Metagenome / Metatranscriptome	140	N
F070633	Metagenome / Metatranscriptome	123	N

Sequences

Protein ID	Family	RBS	Sequence
Draft_1000588317	F053881	N/A	MSGLLKISKESLGEKERKLYLKLYKHIIESFEIDELAADQIALALISQKCILLPRLLSGEDIDINQTSESIRKWLAEYRLTPKSREKEKEVTINLSAYYRGDPQGEG*
Draft_1000588318	F070633	AGAAG	VLDVSHSNSNEGFVYSVSHYLQLGPNKCKGDYNLVVVPISDGILTSIERDNFSIAMDTEGRLILTRKDRKVQLVFDYEKGFMTGVLGGILYDTFEIPKQEGTDYHG*