Scaffold ML7_10063768

Overview

Basic Information

• Taxon OID: 3300001336
• Scaffold ID: ML7_10063768
• Source Dataset Name: ML7
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Pennsylvania State University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 3078
• Total Scaffold Genes: 6
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (33.33%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Benthic Lake → Benthic Lake Microbial Communities From British Columbia, Canada, For Chemocline Samples

Source Dataset Sampling Location

• Location Name: Wetlands, British Columbia
• Coordinates
  • Lat. (^o): 49.283333
  • Long. (^o): -119.583333

Associated Families

Family	Category	Number of Sequences	3D Structure?
F021068	Metagenome / Metatranscriptome	220	Y

Sequences

Protein ID	Family	RBS	Sequence
ML7_100637683	F021068	GAGG	MQPSDHTIYAVCIPGESVRYQAKSRIVPIMGGSYALSAAERESLRKQGYIFDDENADLSALNGRWGELSCIHWMINNAKQENIGNAQYRRNWIEPQGEWYCPETLYLPEPAQFSCTLEQQFYGGHSAFDAPAITRKLADDGNWLFTRSEIDKIWAQSSFIGCNMARGPRQSYLRFMTVLFAGLAPIWRQNKEHFLYRYGFMQGQNFPWHGNCHCSYRLHWLALKS*