Scaffold ML7_10047085

Overview

Basic Information

• Taxon OID: 3300001336
• Scaffold ID: ML7_10047085
• Source Dataset Name: ML7
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Pennsylvania State University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 3207
• Total Scaffold Genes: 7
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 7 (100.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Aokuangvirus → Aokuangvirus SCBWM1 (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Benthic Lake → Benthic Lake Microbial Communities From British Columbia, Canada, For Chemocline Samples

Source Dataset Sampling Location

• Location Name: Wetlands, British Columbia
• Coordinates
  • Lat. (^o): 49.283333
  • Long. (^o): -119.583333

Associated Families

Family	Category	Number of Sequences	3D Structure?
F069436	Metagenome	124	Y
F075836	Metagenome	118	Y

Sequences

Protein ID	Family	RBS	Sequence
ML7_100470852	F069436	AGGAGG	MTAETKDTLFGIMEKWGFPTLVALALAFFIRQDLLLPLLEEHRLTLKEVRETQREIADAIGDQTRLLLSIQSGKPVVGLRTVDVKELENGQN*
ML7_100470854	F075836	GGGGG	VRFLIVSLVVLAGCVATLPNDATISADLACELARGVVQLRAAPEVPDDKPKPGDKCENCEGRGYVGDGTVKVKCQPCDGTGKVQ*