Scaffold ML7_10018919

Overview

Basic Information

• Taxon OID: 3300001336
• Scaffold ID: ML7_10018919
• Source Dataset Name: ML7
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Pennsylvania State University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 4790
• Total Scaffold Genes: 12
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 8 (66.67%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Benthic Lake → Benthic Lake Microbial Communities From British Columbia, Canada, For Chemocline Samples

Source Dataset Sampling Location

• Location Name: Wetlands, British Columbia
• Coordinates
  • Lat. (^o): 49.283333
  • Long. (^o): -119.583333

Associated Families

Family	Category	Number of Sequences	3D Structure?
F021020	Metagenome / Metatranscriptome	221	Y
F034945	Metagenome / Metatranscriptome	173	Y

Sequences

Protein ID	Family	RBS	Sequence
ML7_100189191	F034945	N/A	ANVGIRGSDGNTVYLYLHWGGSDRHETVAKALAHAMVRDGDESYFTRIFISRVIDTDWDKETGVGFSVNKLPAGGDGYDVPIYDYKKQTIGLYEESWDKAGGFVKFTDIEYPRDIYLAEFGVRGVGAYV*
ML7_100189192	F021020	AGGAG	MSNRMSNNYDLNIWDRRGYETEYEEEGWSIEVYTYNCIGDAYGIGDYHSTITLTPTEAKRLTLGWGPDLGGDYTPDNDFWLDKETFLDTYTDIPERVANLLSALPEYEQSLDLDPSLTV*