Scaffold Draft_10278801

Overview

Basic Information

• Taxon OID: 3300001239
• Scaffold ID: Draft_10278801
• Source Dataset Name: Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: McGill University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 611
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Sampling Location

• Location Name: Fort McMurray in northeastern Alberta, Canada
• Coordinates
  • Lat. (^o): 57.01116
  • Long. (^o): -111.6
  • Depth (m): 0 to .1

Associated Families

Family	Category	Number of Sequences	3D Structure?
F007685	Metagenome / Metatranscriptome	346	Y
F021289	Metagenome / Metatranscriptome	219	Y

Sequences

Protein ID	Family	RBS	Sequence
Draft_102788011	F021289	N/A	YPVLFNDVSEFQIQYVHPLPQNEVIKCDSAGFGLVLMHRSIVPIMREKYPNQSMFMETAGGHDDQFIGEDIIFFRKMKAAGIPLHAHTGALVKHMKRFSLDYDYYGMYWTMDSIQKKMKEQPN*
Draft_102788012	F007685	AGGAG	VAGRDITEGRATRAIAVDVGVVSTSAIWQNTDVAYDVAVGGMPFIYANQRCTSLYPTDCTIPTR*