Basic Information | |
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Taxon OID | 3300001183 Open in IMG/M |
Scaffold ID | BBAY88_1000197 Open in IMG/M |
Source Dataset Name | Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY88 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | J. Craig Venter Institute (JCVI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 12700 |
Total Scaffold Genes | 31 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 5 (16.13%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Associated Families | 2 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities |
Source Dataset Sampling Location | ||||||||
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Location Name | Botany Bay, Sydney, NSW, Australia | |||||||
Coordinates | Lat. (o) | -33.966629 | Long. (o) | 151.166614 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F004866 | Metagenome | 420 | Y |
F006666 | Metagenome / Metatranscriptome | 367 | Y |
Protein ID | Family | RBS | Sequence |
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BBAY88_100019711 | F006666 | N/A | VKPKSHKEFKKGIADEVGVHQSVVDDFLSFYYAKVRSKLSSLDFPRVYLEGLGTFYLRKNKLEKAIKKNKSILGNLAKRTYAGFAKSEDVQKDIEQMEQALYQMEQDILNKKNFKNER* |
BBAY88_100019712 | F004866 | GAG | MALVNKVDLKLQVDLDVSIKYQIVTYCFFNETLISNSDLKFLSELGKAGKIELTKFCTDLVKQNIFKSSQSARNAITKAEKKGLLTKQGVNKKTITLNKAINVQTDGLVLLDYKVLGREAQES* |
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