Scaffold Draft_11629488

Overview

Basic Information

• Taxon OID: 3300000558
• Scaffold ID: Draft_11629488
• Source Dataset Name: Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: McGill University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 34224
• Total Scaffold Genes: 51
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 37 (72.55%)
• Novel Protein Genes: 10
• Novel Protein Genes with Ribosome Binding Sites (RBS): 9 (90.00%)
• Associated Families: 10

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Sampling Location

• Location Name: Syncrude, Ft. McMurray, Alberta
• Coordinates
  • Lat. (^o): 57.02
  • Long. (^o): -111.55

Associated Families

Family	Category	Number of Sequences	3D Structure?
F002260	Metagenome / Metatranscriptome	577	Y
F003807	Metagenome	467	Y
F011761	Metagenome / Metatranscriptome	287	Y
F026558	Metagenome	197	Y
F028717	Metagenome / Metatranscriptome	190	Y
F040626	Metagenome	161	Y
F042895	Metagenome	157	Y
F058142	Metagenome / Metatranscriptome	135	Y
F058146	Metagenome	135	Y
F099170	Metagenome	103	Y

Sequences

Protein ID	Family	RBS	Sequence
Draft_1162948814	F040626	N/A	MMSILMIDSLGKRYGLLPSEVLNRSNTFDLYIMDAALTFENYQHKKALNGGKDPIPDYTTDQLQAMLKKVRNQ*
Draft_1162948815	F058146	AGGA	MKLSQLSAKPQLIEVSLNDDDIIKEFGEAITFHTWDRQPMDVFLKLANADNNPMSIISIVKTLILDEKGKEILKDDAMLPTHVLMKAITKVTDILGK*
Draft_1162948816	F003807	GAGG	MTQQEQVWYKTNEEKLRSLIADEAKMMPMLDNMQATIKQLKAKQTFRLALLNQLLEEINENK*
Draft_1162948818	F058142	AGGAG	MPNVNYTVANEPYVTDTDIIAVLKRDIPKQWNIPIYDEFPSDNEVVRYGVYVSDVHLDERNPHQLGIQYCASIYHAYDTFSIAYISYQDDPYNRAINAIVGNLVTALKDNGKQLFDGYFERDFNQIRTYGPTSSEKHVWTFRLLRMEFNT*
Draft_1162948819	F002260	AGGA	MSVPYQRISNATVADIAFYDPAAERRAEALNVNWDPYFKVSSQEWLYKLEFGWWQKYCDTVLGAYYYSNLPNGQLISSFNPNLLIKNDQTLIRLDTFGAILCFYESLVTDVSNMNEVDLQNYNFAKERCDREWTKALELMNFYDLYQDSPNGPTTKLEENWTADVDYFNGDRRYF*
Draft_1162948820	F011761	AGGAG	MAYVLGGPNNEADGFTTAISNFALRAMHESTGLVNMTNVVTPTQGNTFLVPNFAPITYQDYNPAGTGGTYGTGDAVVQNPALGQGSITAEPAVAQTAFDIFYGWTTSFQLAASLGAELGESFAEKVDQRVTKAFLSFKATPGNTYYSATPADGFARVLELGAMELVADGDSPAGATAGFTANSVLELIRLVKQNFKVARMPGAPVIVLDSNGDSATVTASVQSGSSLTRLLGELTGGAVSQSGGSNLSALGNELLSTGRIESVYGCMVMFTTFLQSATRTVAGVSSETALVGAYFGDSALFTVMKEGLQLKTGEVPGGLQQWLTGLGYFGSGVGDLRRGGAINILQA*
Draft_1162948821	F028717	AGGA	MDQKSNFVGNDQAPGVAQGQATDDSNEQNVNPGAIRKSTTQSLLNALSNASGMQFQSVEDALAFMARVGAQTTSGGSAQPVMDTKPQQNAGRVTTNDLHEQFQKLQQDLQVKEQRLREKELDSDIQRAMGDRFDPDLLDYALSKVKSNIQWNQDGTYTIVNNKGQERYGQDGMPLSIQGLVQEVAQGNPKLLKQSSTNSGSGLRPGMGSFTGAIDEAIPDYSRDPAAFNAWAARNGLGKNVGLKGLGVTATVSSSSRKVL*
Draft_1162948822	F026558	GAG	MKNSDLLKKSPIYDNIYLQMLTYQNAYLGGLPFKQMVRKKRPSEDSTLYNDLITNTVAQPICRYIVDTINDVLFEPGIKRNVQFCTPTGAYIDPKNTEWAELFLLDADLNNRSLTSFMEGLGDLTSIYGHCWVAVDMPQQTEGNLGRPYVCAINPLDVWSWEFDYYGGKPMLKYVKIKEMEDEDCVYIKCYHLGDATTPSYWKSYEVSKGPGELNKEAELIGEGTFPPGMAIPVFLAYGRRDPRTIDLGVSDIDSAVDAQKEHYKLECEKYTALQFAHTIIRAEKGISIPVHAGAIVRASEGQVEAIPVDTGDVDKIIMAQQDILEQIEALTGLGGLRNTKNQIASGIAIIEERKQLHRLAKAKARLMEVAEEMIFTFAARFMNVRWAGEVHYNTDYEAHDTNYRMALIRSAKELVGDNEIIQGLITKEIIAMLAPSEEIPQYENAYIQTLPNGDLKKLMIEDNQDVNSRDLAPSMIPQHEMYGEEENESEDNGDGEAESGDNTSLLGGAGTPVTNVGLTYYPGQVAPAIINTLNTGR*
Draft_1162948831	F042895	GAGG	MSKLGLIDRPFTAHIKNFDKMVTELSKYMTEDEIDKCIGFMHTLKDTKNDINPSPEDCKTQLQIMLGKDRFLELTQQWGKENQKFLTVFGTLKFRRKTDGTYWDGLDETDNPEDYEKIYI
Draft_1162948849	F099170	GGAG	MEFMMTFVKSLPHWLGTITEVMIVTVVFLTCMTFLAGIWCGLKVIGKRSNSIQQIEFFPPKIVFKGELNK*