Scaffold Draft_10016314

Overview

Basic Information

• Taxon OID: 3300000558
• Scaffold ID: Draft_10016314
• Source Dataset Name: Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: McGill University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2438
• Total Scaffold Genes: 7
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 5 (71.43%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → Predicted Viral (Source: DeepVirFinder)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Sampling Location

• Location Name: Syncrude, Ft. McMurray, Alberta
• Coordinates
  • Lat. (^o): 57.02
  • Long. (^o): -111.55

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001531	Metagenome / Metatranscriptome	676	Y
F028488	Metagenome / Metatranscriptome	191	Y

Sequences

Protein ID	Family	RBS	Sequence
Draft_100163141	F028488	N/A	KSSXDLDFGYGRKGEXXVDELLTGGRTVEVKRDRKWAKTNNLYIETECFFKKIEDWAPSGLGVTEASYWAFVLEESTLIVPTDALRYAVKEFGREIYV*
Draft_100163142	F001531	AGAAGG	MNWQQIEPWEYVIVSVASEYHRKFDMVELEDIKQSLYEWFAKHPNKVTEWEKIGDKDAKNLIYRSLRNHALDYCQKWKAKSVGYDVSDLYYYESDVVEALLPAVLRGEWGVTHKLNLGRPGRPXAPSEGGNLSVMMMEIDSAYWKLSKEDRKILFFRYAESMDYKEISNYLSLGSDDAARMRGNRAIKRLVNKLGGFKPFYDNDIMEPTETEPSEDSSYQELGTPQESEQ*