Scaffold bgg_mtDRAFT_1052512

Overview

Basic Information

• Taxon OID: 3300000305
• Scaffold ID: bgg_mtDRAFT_1052512
• Source Dataset Name: Blue grama grass rhizosphere microbial communities from Sevilleta, New Mexico, USA - Combined Assembly
• Source Dataset Category: Metatranscriptome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Draft

Scaffold Components

• Scaffold Length (bps): 710
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → Blue Grama Grass Rhizosphere Eukaryotic And Microbial Communities From Sevilleta Long Term Ecological Research Site, New Mexico, Us

Source Dataset Sampling Location

• Location Name: Sevilleta Long Term Ecological Research site, New Mexico, US
• Coordinates
  • Lat. (^o): 34.3348
  • Long. (^o): -106.631

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001291	Metagenome / Metatranscriptome	729	Y

Sequences

Protein ID	Family	RBS	Sequence
bgg_mtDRAFT_10525121	F001291	N/A	GILEVQFLQYSFIKNKMAAILVVLASLMAMSLAAPTPACIPDKTTFYWKAPCDGQSFPNKVQISNVQVTQSGQSVDQRGGMDLSMNLDLQADIVDQYGTVAKPTLDVGIMEYSKNLMGKCEWKKVPTLGLLDNMDACKIVENCKMENDPKTMKAKINFKELAGPLYAGIGVDTYYAITLTFKDDKNPFMCVYSQDIVIGK*