Scaffold TB_GS09_5DRAFT_10003554

Overview

Basic Information

• Taxon OID: 3300000234
• Scaffold ID: TB_GS09_5DRAFT_10003554
• Source Dataset Name: Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- GS09_5
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Draft

Scaffold Components

• Scaffold Length (bps): 15674
• Total Scaffold Genes: 20
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Groundwater → Cave Water → Groundwater → Groundwater Microbial Communities From Subsurface Biofilms In Sulfidic Aquifier In Frasassi Gorge, Italy

Source Dataset Sampling Location

• Location Name: Grotta Sulfurea, Talus Pool, Frasassi Caves, Italy
• Coordinates
  • Lat. (^o): 43.383333
  • Long. (^o): 12.95

Associated Families

Family	Category	Number of Sequences	3D Structure?
F085105	Metagenome	111	Y

Sequences

Protein ID	Family	RBS	Sequence
TB_GS09_5DRAFT_1000355417	F085105	N/A	MLLNSLNNQFIVLFPQNFFYSEIRKKWDPIVRRLKLPYESMEDYINASIQSITFPSVELANVEQGQGQFMITYRGGKELEPILDKNLSLTFKLTEGFISYWILFEQIEMFREYAPTVPFWPPMYVSFLDHHGFELMVFSFEKIIPTNLSQLDISYSKTVAEFTTFNLGLKYNRYNINRRFQELKGDNDII*