Basic Information | |
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Taxon OID | 3300000133 Open in IMG/M |
Scaffold ID | SA_S1_NOR02_45mDRAFT_c1022496 Open in IMG/M |
Source Dataset Name | Marine microbial communities from chronically polluted sediments in Adventfjord, Norway - Svalbard Archipelago station 1 sample NOR 02_45m |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Draft |
Scaffold Components | |
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Scaffold Length (bps) | 732 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine → Marine Microbial Communities From Chronically Polluted Sediments In Four Geographic Locations |
Source Dataset Sampling Location | ||||||||
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Location Name | Norway: Adventfjord, Svalbard Archipelago | |||||||
Coordinates | Lat. (o) | 78.237209 | Long. (o) | 15.677776 | Alt. (m) | Depth (m) | 45 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F054045 | Metagenome / Metatranscriptome | 140 | Y |
Protein ID | Family | RBS | Sequence |
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SA_S1_NOR02_45mDRAFT_10224962 | F054045 | GGA | MKYDSTTDMWSGDIFLPQVSTSLFEVGQLFILEKMINATTNTFEYGYPHESTGVTGSCDWEVEWDIEQPSEIFLFQFNKDFNTGTQSALVQEPDGPPLVKYDKITVPLDHDPNQTINPEGFIVSDKIRSESLQLNVAFSSGVENTYKRKLLIVDTCTNTTIAEFTVWAESLAEDERLRVMTQNMGYNVIAADSTVFRDTN |
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