Scaffold 2225744358

Overview

Basic Information

• Taxon OID: 2222084010
• Scaffold ID: 2225744358
• Source Dataset Name: Coastal lagoon microbial communities from Mar Menor, Spain - Sample 1
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University Miguel Hernandez
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 15180
• Total Scaffold Genes: 43
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 38 (88.37%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 3 (100.00%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Unclassified → Unclassified → Coastal Lagoon → Coastal Lagoon Microbial Communities From Mar Menor And Albufera, Spain

Source Dataset Sampling Location

• Location Name: Mar Menor, Spain
• Coordinates
  • Lat. (^o): 37.72955
  • Long. (^o): -0.7741
  • Depth (m): 4

Associated Families

Family	Category	Number of Sequences	3D Structure?
F034945	Metagenome / Metatranscriptome	173	Y
F042350	Metagenome / Metatranscriptome	158	Y
F090460	Metagenome / Metatranscriptome	108	Y

Sequences

Protein ID	Family	RBS	Sequence
2225137728	F034945	AGG	MGDRANVGIRGTDGNTIFLYLHWGGMDRYEIVANAISHAMNRDGDEAYFTRIFVSRVIDRDWDKETGVGMSINKLSATGEDEYLVPIYDYTNKTISVHKEKWDNAGGYIDLTPLIIYNRDEYLAEYAVRGVGAYV
2225137731	F090460	AGGA	MINDKMDDKEYWEGIRDACEYFKDELGIEDATHTTLYEQAEAELALV
2225137735	F042350	AGGA	MAGRESELLRGYIKGVSAMMGLISSDKVKRLDKTNVLQYAQQLVEEKRLELDEPK