Scaffold 2218574909

Overview

Basic Information

• Taxon OID: 2209111015
• Scaffold ID: 2218574909
• Source Dataset Name: Tailings pond microbial communities from Northern Alberta -TP6_2008_2010:
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: McGill University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 502
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Source Dataset Sampling Location

• Location Name: Canada: Alberta
• Coordinates
  • Lat. (^o): 57.02
  • Long. (^o): -111.55

Associated Families

Family	Category	Number of Sequences	3D Structure?
F040163	Metagenome	162	Y

Sequences

Protein ID	Family	RBS	Sequence
2218585756	F040163	N/A	RGGRNAAAPSTTAATRPDCNSTPEEPPTGTMSTPAPELLAEVLRHALDGVAIVEESGGTPRVLYANATLAALLRRPEEWLYGRALDEVEAEAPADPNATVSGVGLRTRLRRSDATMVECERWAVLLDDGRLALYYRPVPRNSPGALAAAVDRSSGLSTPEHLIEVLR