Scaffold FWIREl_GJ4R3DH02GC00N

Overview

Basic Information

• Taxon OID: 2124908008
• Scaffold ID: FWIREl_GJ4R3DH02GC00N
• Source Dataset Name: Soil microbial communities from sample at FACE Site Metagenome WIR_Elev2
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Draft

Scaffold Components

• Scaffold Length (bps): 532
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiales incertae sedis → Allonocardiopsis → Allonocardiopsis opalescens (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil Microbial Communities From Face And Otc Sites In Usa

Source Dataset Sampling Location

• Location Name: Wisconsin Rhinelander (WIR)
• Coordinates
  • Lat. (^o): 45.68
  • Long. (^o): -89.63

Associated Families

Family	Category	Number of Sequences	3D Structure?
F066946	Metagenome / Metatranscriptome	126	Y

Sequences

Protein ID	Family	RBS	Sequence
FWIREl_09403930	F066946	GGA	VTGFYWERHPDGPFATLIAVTATYCSPDADAEDYERLKRLAEREDDQRMRVFKEELRQALADPSQLPGDELDNAVEFTDENEAAFLRRLWRDLYGDEPT