Scaffold FWIRElOz_GKZ9IRQ02I2YU9

Overview

Basic Information

• Taxon OID: 2124908007
• Scaffold ID: FWIRElOz_GKZ9IRQ02I2YU9
• Source Dataset Name: Soil microbial communities from sample at FACE Site Metagenome WIR_ElevOz2
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Draft

Scaffold Components

• Scaffold Length (bps): 513
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (100.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil Microbial Communities From Face And Otc Sites In Usa

Source Dataset Sampling Location

• Location Name: Wisconsin Rhinelander (WIR)
• Coordinates
  • Lat. (^o): 45.68
  • Long. (^o): -89.63

Associated Families

Family	Category	Number of Sequences	3D Structure?
F047852	Metagenome / Metatranscriptome	149	Y

Sequences

Protein ID	Family	RBS	Sequence
FWIRElOz_01058170	F047852	AGG	MSDDTLGKIRRAAVVGGLGLAVQLGAAFHWTPASFVVSASVGIPLVLVGGALFLRAVWSHMRDKGAL