Scaffold FNTS067_GJ87FRN01BG47X

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold FNTS067_GJ87FRN01BG47X

Scaffold FNTS067_GJ87FRN01BG47X

Overview

Basic Information
Taxon OID	2119805012 Open in IMG/M
Scaffold ID	FNTS067_GJ87FRN01BG47X Open in IMG/M
Source Dataset Name	Soil microbial communities from sample at FACE Site NTS_067 Nevada Test Site
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Draft

Scaffold Components
Scaffold Length (bps)	530
Total Scaffold Genes	1 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Terrestrial → Soil → Sand → Desert → Soil → Soil Microbial Communities From Face And Otc Sites In Usa

Source Dataset Sampling Location
Location Name	USA: Nevada, FACE Site NTS_067 Nevada Test Site
Coordinates	Lat. (^o)	36.766667	Long. (^o)	-115.95	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F060605	Metagenome	132	Y

Sequences

Protein ID	Family	RBS	Sequence
FNTS067_00893010	F060605	GAG	VNVVDIDASLAIEIRVENYEQVVKKDKGRFLGTVTRVPVVNSYVKGKVDETVEEEVKKNLEQTLPEKLADELTKGLREQGVQASVDVSIAF

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