Scaffold LanddsortDeep80_GCH9ZVC01B2T7X

Overview

Basic Information

• Taxon OID: 2040502003
• Scaffold ID: LanddsortDeep80_GCH9ZVC01B2T7X
• Source Dataset Name: 80 m water depth
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Soedertoern University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 531
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Landsort Deep, Baltic Sea

Source Dataset Sampling Location

• Location Name: Sweden
• Coordinates
  • Lat. (^o): 58.58333333
  • Long. (^o): 18.23333333
  • Depth (m): 80

Associated Families

Family	Category	Number of Sequences	3D Structure?
F071404	Metagenome	122	N

Sequences

Protein ID	Family	RBS	Sequence
80m_1238650	F071404	N/A	MFSPFFTNKKKIIKQLLDMIEYLIADNNRLRQKIERIEHRQGLRFGGT