NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F105992

Metagenome / Metatranscriptome Family F105992

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105992
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 130 residues
Representative Sequence MTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI
Number of Associated Samples 95
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 77.00 %
% of genes near scaffold ends (potentially truncated) 25.00 %
% of genes from short scaffolds (< 2000 bps) 92.00 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(11.000 % of family members)
Environment Ontology (ENVO) Unclassified
(23.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(43.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158
1JGI24739J22299_101859822
2JGI24750J21931_10571941
3JGIcombinedJ43975_100118333
4Ga0066685_102674812
5Ga0065712_102136212
6Ga0065715_100348842
7Ga0065705_100598752
8Ga0065707_106228681
9Ga0070676_100431125
10Ga0070714_1013933531
11Ga0070711_1008128632
12Ga0070705_1016359851
13Ga0066695_100917834
14Ga0066692_109140872
15Ga0066703_102002782
16Ga0068852_1011960581
17Ga0068860_1002445222
18Ga0070715_103091652
19Ga0075018_103983272
20Ga0070712_1005116822
21Ga0066653_100568002
22Ga0066659_109673462
23Ga0099791_104526262
24Ga0099829_104501392
25Ga0105247_106888421
26Ga0105243_108483112
27Ga0105242_121611292
28Ga0127503_110438271
29Ga0134111_104527252
30Ga0134066_102683171
31Ga0134126_110915542
32Ga0134127_105340361
33Ga0134127_123541601
34Ga0134121_115681132
35Ga0137364_100446501
36Ga0137363_100182256
37Ga0137363_101700153
38Ga0137376_101486414
39Ga0137370_106501772
40Ga0157302_104110181
41Ga0137394_102336342
42Ga0137359_108096032
43Ga0137407_107736101
44Ga0164300_103802182
45Ga0164303_101145991
46Ga0164299_112608392
47Ga0164301_104706622
48Ga0164309_111030651
49Ga0164307_112529912
50Ga0164306_115831811
51Ga0164305_111642421
52Ga0157374_109299311
53Ga0157378_100136227
54Ga0157372_128940131
55Ga0157379_114075402
56Ga0134085_104578702
57Ga0182036_103410402
58Ga0182033_105128682
59Ga0182032_107643342
60Ga0182032_112427371
61Ga0182040_113708401
62Ga0134069_10808152
63Ga0184608_103482902
64Ga0066669_100297553
65Ga0193721_10188944
66Ga0179594_100530141
67Ga0210387_102515452
68Ga0210402_101596643
69Ga0207666_10079632
70Ga0207693_103017262
71Ga0207664_113511552
72Ga0207701_101687453
73Ga0207708_107208471
74Ga0209159_10061978
75Ga0257146_10486671
76Ga0257178_10345792
77Ga0257160_10614301
78Ga0257168_11030641
79Ga0209648_104715592
80Ga0209577_108323961
81Ga0207624_1054932
82Ga0075388_116435022
83Ga0075373_116330881
84Ga0138298_14576062
85Ga0170822_128938092
86Ga0170823_165103311
87Ga0170824_1031606182
88Ga0170820_125824832
89Ga0170819_110891641
90Ga0307468_1009919922
91Ga0307473_103663261
92Ga0306925_102845023
93Ga0307479_102681022
94Ga0310890_105027321
95Ga0306924_125161921
96Ga0307471_1004108744
97Ga0307471_1010879461
98Ga0307472_1004447782
99Ga0307472_1015250301
100Ga0310896_105082141
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 19.55%    β-sheet: 26.32%    Coil/Unstructured: 54.14%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060708090100110120130MTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQISequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Groundwater Sediment
Watersheds
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Grasslands Soil
Switchgrass Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Soil
Grasslands Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Soil
Forest Soil
Soil
Hardwood Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Agricultural Soil
Miscanthus Rhizosphere
Corn Rhizosphere
Switchgrass Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
10.0%11.0%4.0%4.0%8.0%9.0%5.0%7.0%7.0%6.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24739J22299_1018598223300001989Corn RhizosphereALEVMFEGGSLHGTTADLPSRDLERVLLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
JGI24750J21931_105719413300002070Corn, Switchgrass And Miscanthus RhizosphereMTAIPVQFPDESVKLDDVEEGRVLTALEVMFEGGSLHGTTADLPSRDLERVLLRVHGRNRHFFQTYXRTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
JGIcombinedJ43975_1001183333300002899SoilMTAILVQFPDESVKLDDVEERRVLTALEVMYEGGSLHGKTADFPSRDLERVVLRVHGRNRHSFETYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKRENANEYRAQFAALRIRKLKAIQI*
Ga0066685_1026748123300005180SoilMTAIPVQFKDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADLPSRDLERVVLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCYDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0065712_1021362123300005290Miscanthus RhizosphereMSMTAIPVQFPDESVKFDDVEERRVLTALEVMYEGGSLHGKTADFPSRDLERVVLRVHGRNRHFFETYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDYPAKRKSENANEYRVQFAAFRIGKLKAIQI*
Ga0065715_1003488423300005293Miscanthus RhizosphereMTAIPVQFPDESVKLDDVEEGRVLTALEVMFEGGSLHGTTADLPSRDLERVLLRVHGRNRHFFQTYQRTICVDIRSQRTIFRYAGLSSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAAXRIXKLKAIQI*
Ga0065705_1005987523300005294Switchgrass RhizosphereMTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0065707_1062286813300005295Switchgrass RhizosphereMTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLSSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRLRKVKPIVI*
Ga0070676_1004311253300005328Miscanthus RhizosphereMTAIPVQFPDESVKLDDVEEGRVLTALEVMFEGGSLHGTTADLPSRDLERVLLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0070714_10139335313300005435Agricultural SoilMTAILVRFPDESVEVDDVEKHRILTALEVIYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGVTSKSNNSSWWKRLPARRKSEDANEYRVQFAGLRIRKLKAIQI*
Ga0070711_10081286323300005439Corn, Switchgrass And Miscanthus RhizosphereMTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRLRKVKPIVI*
Ga0070705_10163598513300005440Corn, Switchgrass And Miscanthus RhizosphereMSLTAILVRFPEESVKLDDVEEGRVLTALEVMYGGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAAFRIGKLKAIQI*
Ga0066695_1009178343300005553SoilMTAIPVQFKDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADLPSRDLERVVLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKPKAIQI*
Ga0066692_1091408723300005555SoilDVEEGRVLTALEVMFEDGSLHGKTADFPSRDLERVLLRVDGRNRHLFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCYDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0066703_1020027823300005568SoilMTAIPVQFPDESVKLDDVEEGRVLTALEVMFEDGSLHGKTADFPSRDLERVLLRVDGRNRHLFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAPLRIRKLKAIQI*
Ga0068852_10119605813300005616Corn RhizospherePVQFPDESVKLDDVEEGRVLTALEVMFEGGSLHGTTADLPSRDLERVLLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0068860_10024452223300005843Switchgrass RhizosphereMTAIPVQFPDESVKLDDVEEGRVLTALEVMFEGGSLHGTTADLPSRDLERVLLRVHGRNQHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0070715_1030916523300006163Corn, Switchgrass And Miscanthus RhizosphereMTAILVRFPDESVKLDNVEERRVLTTLEVIYDGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSQRTIFRYAGLSSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0075018_1039832723300006172WatershedsMTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGQTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDRPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0070712_10051168223300006175Corn, Switchgrass And Miscanthus RhizosphereMTAIAARFPDESVKLDDVEEGRVLTALEVMYEGGSLHGETANFPSRDLERVVLRVHGRNRHFFQTYERTICVDIRSQRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAI
Ga0066653_1005680023300006791SoilMTAIPVQFKDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADLPSRDLERVVLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0066659_1096734623300006797SoilMTAIPVQFPDESVKLDNVEERRVLTALEVIYEGGWFDGKTADFPTRDLERVVLGLHLRNWHFFETYKRTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCYDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0099791_1045262623300007255Vadose Zone SoilMTAILVQFPDESVKLGDVEEGRVLTALEVMYEGGSLHGETADFPSRDLERVRLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDWPAKRKSENANEYRAQFAALRIRKLKAIQI*
Ga0099829_1045013923300009038Vadose Zone SoilMTAIPVQFPDESVKLGDVEEGRALTALEVMYEGGSLHGETADFPSRDLERVRLRVHGRNRHFFQTYERTIYVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAAFRIGKLKAIQI*
Ga0105247_1068884213300009101Switchgrass RhizosphereMTAIAARFPDESVKLDDVEEGRVLTALEVMFEGGSLHGTTADLPSRDLERVLLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0105243_1084831123300009148Miscanthus RhizosphereLDDVEEGRVLTALEVMFEGGSLHGTTADLPSRDLERVLLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0105242_1216112923300009176Miscanthus RhizosphereGRVLTALEVMYGGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSQRTIFRYAGVSSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRLRKVKPIVI*
Ga0127503_1104382713300010154SoilMSAIPVQFPDQFVKLDDVAEGRVLTALEVMFEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0134111_1045272523300010329Grasslands SoilESVKLDDVEGGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCYDCPAKRKSENPNEYRVHFAALRIRKLKAIQI*
Ga0134066_1026831713300010364Grasslands SoilMTAIPVQFKDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYR
Ga0134126_1109155423300010396Terrestrial SoilMTAIPVQFPDESVILDDVEEGRVLTALEVMFEGGSLHGTTADLPSRDLERVLLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0134127_1053403613300010399Terrestrial SoilMTAIEIRFPDESVELDNVEEHRVLTTLEVIYEGGSLHGKTADFPTRDVERVVVGLHLPNWHFFETYKRTICVDIRSQRTIFGYAGTFKPQQPAVWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQR*
Ga0134127_1235416013300010399Terrestrial SoilMTAIPVQFPDESVKLDDVEEGRVLTALEVMFEGGSLHGTTADLPSRDLERVLLRVHGRNRHFFQTYQRTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKL
Ga0134121_1156811323300010401Terrestrial SoilEERRVLTDLEVIYEGGSLHGETADFPSRDLERVVVGLHLRNWNFFETYKRTICVDIRSRRTIFRYAGLSSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0137364_1004465013300012198Vadose Zone SoilMTAIPVQLPDESVKLDDVEEGRVLTALEVMFEDGSLHGKTADFPSRDLERVLLRVDGRNRHLFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRK
Ga0137363_1001822563300012202Vadose Zone SoilMTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLSSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0137363_1017001533300012202Vadose Zone SoilMTATAFRFPDECVKLDDVEERRVLTALEVMYEGGSLHGKTADLPSRDLERVVLRIHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRFRKLKAIEI*
Ga0137376_1014864143300012208Vadose Zone SoilMTAIPVQLPDESVKLDDVEEGRVLTALEVMFEDGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKPKAIQI*
Ga0137370_1065017723300012285Vadose Zone SoilMTAIPVQFKDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADLPSRDLERVVLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQF
Ga0157302_1041101813300012915SoilTMTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSQRTIFRYAGLTSKSNNSSWWKRLLCHNCPAKRKSQNANEYRVQFAALRLRKVKPIVI*
Ga0137394_1023363423300012922Vadose Zone SoilMRAILVQFPDESVKLGDVEEGRVLTALEVMYEGGSLHGKTADFPTRDLERVVVRVYGRNCHFFETYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRAQFAALRIRKLKAIQI*
Ga0137359_1080960323300012923Vadose Zone SoilMTAILVQFPDESVKLGDVEEGRALTALEVMYEGGSLHGETADFPSRDLERVLLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0137407_1077361013300012930Vadose Zone SoilMTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSQNPNEYRVQFAALRIRKLKAIQI*
Ga0164300_1038021823300012951SoilMTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKIADFPSRDLERVVLHVHGRNRHFFQTYERTISVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIIR*
Ga0164303_1011459913300012957SoilMTAIAVQFPDESVELDNVEERRVLTALEVIYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSQRTIFRYAGLSSKSNNSSWWKRLLCHDRPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0164299_1126083923300012958SoilKHRILTALEVMYEGGSLHGKTADFSSRDLERVVLHVHGRNRHFFQTYERTICVDIRTQRTIFRYARLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0164301_1047066223300012960SoilLIFIAHLNRELEGKQMTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTANFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWQKLLRHDCPAKRKSENANEYRVQFAALRIRKLKAIRI*
Ga0164309_1110306513300012984SoilMTAIPVQFPDESVKLHDVEERRVLTALEVMYEGGSLHGKIADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGHTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0164307_1125299123300012987SoilMCQLDDVEERRVLTALEVMYEGGSLHGKTANFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSQRTIFRYAGLSSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0164306_1158318113300012988SoilMTAIPVQFPDESVKLDDIEERRVLTALEVMYEGGSLHGKTANFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0164305_1116424213300012989SoilMTAIPVQFPDESVKLDDVEERRVLTALEVMYEGGSLHGKTANFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRTQRTIFRYAGLSSKSNNSSWWKRLLCHDRPAKRKSENANEYRVQFAGLRIRKLKAIQI*
Ga0157374_1092993113300013296Miscanthus RhizosphereMTAIPVQFPDESVKLDDVEEGRVLTALEVMFEGGSLHGTTADLPSRDLERVLLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWTRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0157378_1001362273300013297Miscanthus RhizosphereMTAIPVQFPDESVKLDDVEEGRVLMALEVMFEGGSLHGTTADLPSRDLERVLLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0157372_1289401313300013307Corn RhizosphereALEVMFEGGSLHGTTADLPSRDLERVLLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRLRKVKPIVI*
Ga0157379_1140754023300014968Switchgrass RhizosphereMTAIPVQFPDESVKLDDVEEGRVLTALEVMFEGGSLHGTTADLPSRDLERVLLRVHGRNRHFFQTYQRTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQF
Ga0134085_1045787023300015359Grasslands SoilVEEGRVLTALEVMYEGGSLHGKTADLPSRDLERVVLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCYDCPAKRKSENANEYRVQFAALRIRKLKAIQI*
Ga0182036_1034104023300016270SoilMTAISVQFPDESIKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPATTKSENANEYRVQFAPLRIRKLKAIQI
Ga0182033_1051286823300016319SoilMTAISVQFPDESVKLDDVEEGRVLTSLEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPATTKSENANEYRVQFAALRIRKLKAIQI
Ga0182032_1076433423300016357SoilMTAISVQFPDESIKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPATTKSENANEYRMQF
Ga0182032_1124273713300016357SoilMTAIPVQFPDESVKLDDVEEGRVLTSLEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI
Ga0182040_1137084013300016387SoilMTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPATTKSENANEYRVQFAALRIRKLKAIQI
Ga0134069_108081523300017654Grasslands SoilMTAIPVQFKDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADLPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCYDCPAKRKSENANEYRVQFAALRIRKPKAIQI
Ga0184608_1034829023300018028Groundwater SedimentMTAIPVQFPDESVKLDDVEEGRVLTALEVMFEDGSLHGKTADFPSRDLDRVLLCVHGRNRHFFQTYGRTICVDIRSRRTIFRYAGLASKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAPLRIRKLKAIQI
Ga0066669_1002975533300018482Grasslands SoilMTAIPVQFKDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADLPSRDLERVVLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCYDCPAKRKSENANEYRVQFAALRIRKLKAIQI
Ga0193721_101889443300020018SoilMTAIPVQFPDESVKLDDVEEGRVLTALEVMFEDGSLHGKTADFPSRDLDRVLLCVHGRNRHFFQTYGRTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAPFRIRKLKAIQI
Ga0179594_1005301413300020170Vadose Zone SoilMTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHGCPAKRKSENANEYRVQFAALRIRKLKAIQI
Ga0210387_1025154523300021405SoilMTAIAVRFPVESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLDRVVLRVHGRNRHFFQAYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDRPAKRKSENANEYRVQFAALRIRKLKAIQI
Ga0210402_1015966433300021478SoilMTAIAVRFPVESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLDRVMLHVHGRNRHFFQAYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDRPAKRKSENANEYRVQFAALRIRKLKAIQI
Ga0207666_100796323300025271Corn, Switchgrass And Miscanthus RhizosphereMTAIPVQFPDESVKLDDVEEGRVLTALEVMFEGGSLHGTTADLPSRDLERVLLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI
Ga0207693_1030172623300025915Corn, Switchgrass And Miscanthus RhizosphereMTAIAARFPDESVKLDDVEEGRVLTALEVMYEGGSLHGETANFPSRDLERVVLRVHGRNRHFFQTYERTICVDIRSQRTIFRYAGLSSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI
Ga0207664_1135115523300025929Agricultural SoilMTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLSSKSNNSSWWKRLLCLACPAKRKSENANEYRVQFAALRIRKLKAIQI
Ga0207701_1016874533300025930Corn, Switchgrass And Miscanthus RhizosphereMTAIPVQFPDESVKLDDVEEGRVLTALEVMFEGGSLHGTTADLPSRDLERVLLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRLRKVKPIVI
Ga0207708_1072084713300026075Corn, Switchgrass And Miscanthus RhizosphereTPHRTARYIRAKGIQRQERRFSKSMTAILVQFPDESVKLDDVEERRVVTALEVMYEGGSLHGKTANFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI
Ga0209159_100619783300026343SoilMTAIPVQFKDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADLPSRDLERVVLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCYDCPAKRKSENANEYRVQFAALRIRKPKAIQI
Ga0257146_104866713300026374SoilMTAILVRFPDESVKLDDVEKRRILTTLEVIYEGGSLHGKTADFPTRDLDRLVAGVHRRTSHFFETYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAPLRIRKLKAIQI
Ga0257178_103457923300026446SoilMTAIPVQFPDESVKLDDVEERRVLTALEVMFEDGSLHGETADFPSRDLERVLLRVDGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAPLRIRKLKAIQI
Ga0257160_106143013300026489SoilMTAIPVQFPDESVKLDDVEEGRVLTALEVMFEDGSLHGETADFPSRDLERVLLRVDGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAPLRIRKLKAIQI
Ga0257168_110306413300026514SoilQFPDESVKLDDVEEGRVLTALEVMFEDGSLHGKTADFPSRHLERVLLRVDGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAPLRIRKLKAIQI
Ga0209648_1047155923300026551Grasslands SoilMTAIPVQFPDESVKLDDVEEGRVLTALEVMFEGASLHGKTADFPSRDLERVLLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAPLRIRKLKAIQI
Ga0209577_1083239613300026552SoilMTAIPVQFPDESVKLDDVEEGRVLTALEVMFEDGSLHGKTADFPSRDLERVLLRVDGRNRHLFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCLAKRKSENANEYRVQFAALRIRKLKAIQI
Ga0207624_10549323300027453SoilMTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLSSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI
Ga0075388_1164350223300030848SoilMTPLLVRFPDKSVKLDDVEEGRVLTALEVIYEGGSLHGKTADLPSRDLERVVLRVHGRNRHFFETYERTICVDIRSRRTVFRYAGLTSKSNNSSWWKRLPAKRKSEDANVYRAQFAGLRIRKLKAI
Ga0075373_1163308813300030945SoilMTPLLVRFPDKSVKLDDVEEGRVLTALEVMFEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKRQNANEYRVQFAALRIRKLKAIVI
Ga0138298_145760623300031015SoilMTAIAVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKKKSENANEYRVQFAALRIRKLKAIQI
Ga0170822_1289380923300031122Forest SoilMTPLLVRFPDKSVKLDDVEEGRVLTALEVVYEGGSLHGKTADLPSRDLERVVLRVHGRNRHFFETYERTICVDIRSRRTVFRYAGLTSKSNNSSWWKRLPAKRKSEDANVYRAQFAGLRIRKLKAIQI
Ga0170823_1651033113300031128Forest SoilGRVLTALEVVYEGGSLHGKTADLPSRDLERVVLRVHGRNRHFFETYERTICVDIRSRRTVFRYAGLTSKSNNSSWWKRLPAKRKSEDANVYRAQFAGLRIRKLKAIQI
Ga0170824_10316061823300031231Forest SoilMTPLLVRFPDESVKLDDVEEGRVLTALEVVYEGGSLHGKTADLPSRDLERVVLRVHGRNRHFFETYERTICVDIRSRRTVFRYAGLTSKSNNSSWWKRLPAKRKSEDANVYRAQFAGLRIRKLKAIQI
Ga0170820_1258248323300031446Forest SoilMTATAFRFPDECVKLDDVEERRVLTALEVMYEGGSLHGKTADLPSRDLERVVLRIHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNISSWWKRLQCHDCPAKRKSENANEYRVQFAALRFRKLKAIEI
Ga0170819_1108916413300031469Forest SoilTAILDQFPDESVKLDDVEEGRVLTTLEVIYEGGSLDGKTADFPTRDLERLVAGVHRRTSHFFETYERTIGVDVRSRRTIFRYAGLTSKSNNSSWWKWLLRHDRPAKRKSENANEYRVQLAALRLRKLKAIEI
Ga0307468_10099199223300031740Hardwood Forest SoilMTAILVRFPNESVEVDDVEKHRILTALEVIYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRTQRTIFRYAGLTSKSNNSSWWKRLLCDNCTAKRKRQNPNEYRVQFAALRIRKLKTIQI
Ga0307473_1036632613300031820Hardwood Forest SoilMTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLSSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRLRKVKPIVI
Ga0306925_1028450233300031890SoilMTAISVQFPDESIKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPATTKSENANEYRVQFAALRIRKLKAIQI
Ga0307479_1026810223300031962Hardwood Forest SoilMSLTAIPIQFPDESVKLDDVEQGRVLTALEVIFEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGVTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKAIQI
Ga0310890_1050273213300032075SoilMTAIEVPFPDECVKLDYVEKRRVLTALEVMYEGGSLHGKTADLPSRDLERVVLRVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRLRKVKPIVI
Ga0306924_1251619213300032076SoilMTAIPVQFPDESVKLDDVEEGRVLTSLEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGLTSKSNNSSWWKRLLCHDCPATTKSENANEYRVQFAALRIRKLKAIQI
Ga0307471_10041087443300032180Hardwood Forest SoilMTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRYAGFSSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRLRKVKPIVI
Ga0307471_10108794613300032180Hardwood Forest SoilMTAIAVRFPDECVKLDNVEERRVLTDLEVIYEGGSLHGKTADFPSRDLERVVLRVHGRNRHFFQTYERTICVDIRSQRTIFRYAGLTSKSNNSSWWKRLLRRDCPAKRKSENANEYRVQFAALRIRKLKAIEI
Ga0307472_10044477823300032205Hardwood Forest SoilMTAIAVRFPDESVELDNVEERRVLTALEVIYEGGSLHGKTADFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRSRRTIFRCAGLSSKSNNSSWWKRLLCHDCPAKRKSENANEYRVQFAALRIRKLKPIQI
Ga0307472_10152503013300032205Hardwood Forest SoilMTAIPVQFPDESVKLDDVEEGRVLTALEVMYEGGSLHGKTANFPSRDLERVVLHVHGRNRHFFQTYERTICVDIRTQRTIFRYAGLTSKSNNSSWWKRLLCDNCTAKRKRQNPNEYRVQFAALRIRKLKTIQI
Ga0310896_1050821413300032211SoilMTAIEVPFPDECVKLDYVEKRRVLTALEVMYEGGSLHGKTADLPSRDLERIVLRVHGHNRHFFQTYERTICVDIRTRRTIFRYAGLTSKSNDSSSWWKRLLCHDCPAKRRSEHANEYRVQFAALRFRKLKAIEV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.