Metagenome Family F105933

Basic Information
Family ID	F105933
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	51 residues
Representative Sequence	MENINTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDALTCDEQMTIEDLIG
Number of Associated Samples	75
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	34.00 %
% of genes from short scaffolds (< 2000 bps)	73.00 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (70.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (50.000 % of family members)
Environment Ontology (ENVO)	Unclassified (94.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (94.000 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 1DelMOSum2010_100991923 2DelMOSum2011_100517473 3DelMOWin2010_101053471 4JGI24006J15134_100560943 5JGI24006J15134_102395093 6Ga0075466_10023382 7Ga0075441_1000395710 8Ga0075441_100224923 9Ga0075441_100596737 10Ga0075447_101831701 11Ga0098038_11071194 12Ga0098038_12232732 13Ga0098037_11161332 14Ga0098058_11592182 15Ga0098040_11895641 16Ga0098048_10001437 17Ga0098044_10907692 18Ga0098055_11072952 19Ga0098055_12988002 20Ga0098060_10582191 21Ga0098060_11410021 22Ga0098060_12123523 23Ga0098053_11113901 24Ga0098050_11662422 25Ga0098034_12251201 26Ga0098041_12238971 27Ga0098036_11097292 28Ga0075444_100439655 29Ga0070747_10602261 30Ga0070747_12540702 31Ga0110931_11386041 32Ga0114898_10196292 33Ga0114898_11210713 34Ga0114905_10875281 35Ga0114905_11133332 36Ga0114910_11247392 37Ga0115549_10270332 38Ga0114909_11150234 39Ga0114933_102004894 40Ga0114933_110187211 41Ga0115000_102863965 42Ga0115000_107574752 43Ga0098049_10704942 44Ga0098056_12463681 45Ga0098061_12129141 46Ga0098059_10564511 47Ga0098047_104187812 48Ga0181391_10088143 49Ga0181391_10791881 50Ga0181386_11587883 51Ga0181395_10308012 52Ga0181395_11212373 53Ga0211496_1000003749 54Ga0211528_101484681 55Ga0211622_100003862 56Ga0222717_1000345421 57Ga0212023_10209491 58Ga0196889_10973243 59Ga0212022_10365632 60Ga0196887_10154521 61Ga0196887_10212503 62Ga0208667_10464022 63Ga0207896_10099426 64Ga0208791_100546214 65Ga0208792_10944402 66Ga0208669_10087661 67Ga0208669_10173538 68Ga0208793_10452553 69Ga0208158_11457431 70Ga0208919_10281901 71Ga0208919_10884852 72Ga0208919_12144431 73Ga0208919_12374831 74Ga0209232_10294831 75Ga0208299_10135444 76Ga0209634_10163735 77Ga0209634_11002892 78Ga0209756_10863135 79Ga0209337_10210231 80Ga0209337_11541804 81Ga0209337_12073932 82Ga0209337_12090384 83Ga0208032_10095449 84Ga0208180_10950752 85Ga0208450_10757402 86Ga0208148_11129001 87Ga0209304_10170873 88Ga0208134_11134042 89Ga0208899_100560711 90Ga0209815_11497732 91Ga0209091_101814551 92Ga0183748_100881611 93Ga0183755_100113025 94Ga0183755_100165420 95Ga0183755_10207242 96Ga0183757_10012097 97Ga0307488_103400464 98Ga0302118_103549721 99Ga0315316_115629752 100Ga0314858_145217_454_609
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 1DelMOSum2010_100991923 2DelMOWin2010_101053471 3Ga0075441_100596737 4Ga0075447_101831701 5Ga0115000_102863965 6Ga0181395_11212373 7Ga0208669_10087661 8Ga0208919_12374831
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 1DelMOSum2010_100991923 2DelMOWin2010_101053471 3Ga0075441_100596737 4Ga0075447_101831701 5Ga0115000_102863965 6Ga0181395_11212373 7Ga0208669_10087661 8Ga0208919_12374831
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF13385	Laminin_G_3	4.00
PF12684	DUF3799	2.00
PF08291	Peptidase_M15_3	1.00
PF00166	Cpn10	1.00
PF02945	Endonuclease_7	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	1.00

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	30.00 %
Unclassified	root	N/A	70.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	1.00 %
Unclassified	root	N/A	70.00 %
Viruses	superkingdom	All Organisms → Viruses	29.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	29.00 %
Unclassified	root	N/A	70.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10099192	All Organisms → Viruses → Predicted Viral	1216	Open in IMG/M
3300000115\|DelMOSum2011_c10051747	All Organisms → Viruses → Predicted Viral	1616	Open in IMG/M
3300000117\|DelMOWin2010_c10105347	Not Available	1022	Open in IMG/M
3300001450\|JGI24006J15134_10056094	All Organisms → Viruses → Predicted Viral	1582	Open in IMG/M
3300001450\|JGI24006J15134_10239509	Not Available	528	Open in IMG/M
3300006029\|Ga0075466_1002338	Not Available	7023	Open in IMG/M
3300006164\|Ga0075441_10003957	All Organisms → cellular organisms → Bacteria	6717	Open in IMG/M
3300006164\|Ga0075441_10022492	Not Available	2595	Open in IMG/M
3300006164\|Ga0075441_10059673	All Organisms → Viruses → Predicted Viral	1499	Open in IMG/M
3300006191\|Ga0075447_10183170	Not Available	694	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	13.00%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.00%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	3.00%
Oceanic	Environmental → Aquatic → Marine → Oceanic	59.00%
Pelagic	Environmental → Aquatic → Marine → Pelagic	2.00%
Strait	Environmental → Aquatic → Marine → Strait	5.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified	15.00%
Volcanic	Environmental → Aquatic → Marine → Volcanic	2.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	59.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	15.00%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	13.00%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	3.00%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	2.00%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	2.00%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	11.00%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	9.00%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	2.00%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.00%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	50.00%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	14.00%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	3.00%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	2.00%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	1.00%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	1.00%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	5.00%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.00%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental	Open in IMG/M
3300006191	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 75 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_100991923	3300000101	Marine	MENINTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDTLTCDEQMTIEDLIG*
DelMOSum2011_100517473	3300000115	Marine	MDKIKTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDELTCDEQMTIEDLIG*
DelMOWin2010_101053471	3300000117	Marine	MDNKLIQDLRMQAVRSLFDGLTFNQATNTSDWDELSCDEQMHLEDLINS*
JGI24006J15134_100560943	3300001450	Marine	MKNIKTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDALSCDEQMTIEDLIG*
JGI24006J15134_102395093	3300001450	Marine	SALAHDLRIQAAKQLFDGLTFSQATNTAEWDALSCDEQMTIEDLIG*
Ga0075466_10023382	3300006029	Aqueous	MENINTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDALTCDEQMTIEDLIG*
Ga0075441_1000395710	3300006164	Marine	MENIKTSALAHDLRMEAMRSLFDGLTFNQATTTSEWDALTCDDQMTLEDLIGTA*
Ga0075441_100224923	3300006164	Marine	MENIKTSALAQDLRIQAAKQLFDGLTFSQATTTNEWDAMKCDDQMTIEDLIG*
Ga0075441_100596737	3300006164	Marine	PQNDTLAHDLRVQAMKNLFEGLDFSQITTTSEWDALTCDDQMTLEDLIGS*
Ga0075447_101831701	3300006191	Marine	MENIKTSALAQDLRIQAAKQLFDGLTFSQATTTNEWDAL
Ga0098038_11071194	3300006735	Marine	MDNQLIQDLRMQAVRSLFDGLTFDQATNTSDWDELTCDEQMRLEDLINS*
Ga0098038_12232732	3300006735	Marine	VYINPLINHKKSNIMENINTSALAHDLRIQAAKQLFDGLTFSQATNTSEWDALTCDEQMTIEDLIG*
Ga0098037_11161332	3300006737	Marine	MDKNLIQDLRMQAVRSLFDGLTFNQATNTSDWDELTCDEQMRLEDLINS*
Ga0098058_11592182	3300006750	Marine	MKNIKTSALAHDLRIQAAKRLFDGLTFSQATTTSEWDALTCDEQMTIEDLIG*
Ga0098040_11895641	3300006751	Marine	MDKNLIQDLRMQAVKALFDGLTFNQATNTADWDELTCDEQMRLEDLINS*
Ga0098048_10001437	3300006752	Marine	MENINTSALAHDLRIQAAKQLFDGLTFSQATNTSEWDALTCDEQMTIEDLIG*
Ga0098044_10907692	3300006754	Marine	MDNQLIQDLRMQAVRSLFDGLTFNQATNTADWDALSCDEQMRLEDLINS*
Ga0098055_11072952	3300006793	Marine	MENINTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDELTCDEQMTIEDLIG*
Ga0098055_12988002	3300006793	Marine	MDNQLIQDLRMQAVRSLFDGLTFNQATNTADWDALSCDEQMRLEDLINSESELSHS
Ga0098060_10582191	3300006921	Marine	MDKINTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDELTCDEQMTIED
Ga0098060_11410021	3300006921	Marine	IKNHKKSNIMDKINTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDELTCDEQMTIEDLIG*
Ga0098060_12123523	3300006921	Marine	AHDLRIQAAKQLFDGLTFSQATTTSEWDELTCDEQMTIEDLIG*
Ga0098053_11113901	3300006923	Marine	MKNIKTSALAHDLRIQAAKRLFDGLTFSQATTTSEWDALTCDEQMTLEDLIG*
Ga0098050_11662422	3300006925	Marine	ALAHDLRIQAAKQLFDGLTFSQATNTAEWDALTCDEQMTIEDLIG*
Ga0098034_12251201	3300006927	Marine	IMDNQLLQDLRMQAVRSLFDGLTFDQATNTSDWDELTCDEQMRLEDLINSES*
Ga0098041_12238971	3300006928	Marine	MDKNLIQDLRMQAVRSLFDGLTFNQATNTADWDALSCDEQMRLEDLINSES*
Ga0098036_11097292	3300006929	Marine	MDNLINDLRMQAVRSLFDGLTFDQATNTSDWDELTCDEQMRLEDLINS*
Ga0075444_100439655	3300006947	Marine	MENIKTSALAQDLRIQAAKQLFDGLTFSQATTTNEWDALTCDDQMTIEDLIG*
Ga0070747_10602261	3300007276	Aqueous	DLRIQAAKQLFDGLTFSQATTTSEWDALTCDEQMTIEDLIG*
Ga0070747_12540702	3300007276	Aqueous	MENIKTSALAHDLRIEAAKQLFDGLTFSQATNTAEWDALNCDEQMTIEDLIG*
Ga0110931_11386041	3300007963	Marine	MDNQLIQDLRMQAVRSLFDGLTFDQATNTADWDALSCDEQMRLEDLINS*
Ga0114898_10196292	3300008216	Deep Ocean	MDNQLIQDLRMQAVKSLFDGLTFNQATNTSDWDELTCDEQMRLEDLINS*
Ga0114898_11210713	3300008216	Deep Ocean	MENIKTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDELTCDEQMTIEDLIG*
Ga0114905_10875281	3300008219	Deep Ocean	INTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDALSCDEQMTIEDLIG*
Ga0114905_11133332	3300008219	Deep Ocean	MDKINTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDELTCDEQMTIEDLIG*
Ga0114910_11247392	3300008220	Deep Ocean	MDKIKTSALAHDLRIQAAKQLFDGLTFSQATNTAEWDALTCDEQMTIEDLIG*
Ga0115549_10270332	3300009074	Pelagic Marine	MKNINTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDALTCDEQMTIEDLIG*
Ga0114909_11150234	3300009414	Deep Ocean	MDKIKTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDALSCDEQMTIEDLIG*
Ga0114933_102004894	3300009703	Deep Subsurface	MDNQLIQDLRMQAVRSLFDGLTFDQATNTSDWDALTCDEQMRLEDLINS*
Ga0114933_110187211	3300009703	Deep Subsurface	DKINTSALAHDLRIQAAKQLFDGLTFSQATNTAEWDALTCDEQMTIEDLIG*
Ga0115000_102863965	3300009705	Marine	PSALAHDLRVEAMKSLFNGLTFNQVTTTSEWDALSCDDQMTLEDLINS*
Ga0115000_107574752	3300009705	Marine	MNNINASALAHDLRVEAMKSLFDGLTFNQVTTTSEWDALSCDDQMTLEDLINS*
Ga0098049_10704942	3300010149	Marine	MDNQLIQDLRMQAVRSLFDGLTFNQATNTADWDALSCDEQMRLEDLINSES*
Ga0098056_12463681	3300010150	Marine	MENIKTSALAHDLRIEAAKRLFDGLTFSQATNTAEWDALTCDEQMTIEDLIG*
Ga0098061_12129141	3300010151	Marine	INSNIMENIKTSALAHDLRIEAAKQLFDGLTFSQATNTAEWDALTCDEQMTIEDLIG*
Ga0098059_10564511	3300010153	Marine	KSNIMDKINTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDELTCDEQMTIEDLIG*
Ga0098047_104187812	3300010155	Marine	MKNIKTSALAHDLRIEAVKRLFDGLTFSQATNTAEWDALTCDEQMTIEDLIG*
Ga0181391_10088143	3300017713	Seawater	MNNIKTSALAHDLRMEAMRSLFDGLTFNQATTTSEWDALTCDDQMTLEDLIG
Ga0181391_10791881	3300017713	Seawater	MDNQLIQDLRMQAVRSLFDGLTFDQATNTSDWDALSCDEQMRLEDLINS
Ga0181386_11587883	3300017773	Seawater	MNNIKTSALAHDLRMEAMRSLFDGLTFNQATTTSEWDAL
Ga0181395_10308012	3300017779	Seawater	MDNLINDLRMQAVRSLFDGLTFDQATNTSDWDALSCDEQMRLEDLINS
Ga0181395_11212373	3300017779	Seawater	HLNPYIMENINTSALAHDLRMEAMRSLFDGLTFNQATTTSEWDALTCDDQMTLEDLIG
Ga0211496_1000003749	3300020405	Marine	MDNQLIQDLRMQAVRSLFDGLTFDQATNTADWDALTCDEQMRLEDLINS
Ga0211528_101484681	3300020417	Marine	NLYIMDNLINDLRMQAVRSLFDGLTFDQATNTADWDALTCDEQMRLEGLINS
Ga0211622_100003862	3300020430	Marine	MDNLINDLRMQAVRSLFDGLTFDQATNTADWDALTCDEQMRLEDLINS
Ga0222717_1000345421	3300021957	Estuarine Water	MENIKTSALAHDLRIQAAKQLFDGLTFSQATNTAEWDALTCDEQMTIEDLIG
Ga0212023_10209491	3300022061	Aqueous	MENINTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDALTCDEQMTIEDLIG
Ga0196889_10973243	3300022072	Aqueous	IKTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDELTCDEQMTIEDLIG
Ga0212022_10365632	3300022164	Aqueous	MENIKTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDELTCDEQMTIEDLIG
Ga0196887_10154521	3300022178	Aqueous	HDLRIQAAKQLFDGLTFSQATTTSEWDALTCDEQMTIEDLIG
Ga0196887_10212503	3300022178	Aqueous	MDKIKTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDELTCDEQMTIEDLIG
Ga0208667_10464022	3300025070	Marine	VYINPLINHKKSNIMENINTSALAHDLRIQAAKQLFDGLTFSQATNTSEWDALTCDEQMTIEDLIG
Ga0207896_10099426	3300025071	Marine	NSNIMENIKTSALAHDLRIQAAKQLFDGLTFSQATNTAEWDALSCDEQMTIEDLIG
Ga0208791_100546214	3300025083	Marine	MENINTSALAHDLRIQAAKQLFDGLTFSQATNTSEWDALTCDEQMTIEDLIG
Ga0208792_10944402	3300025085	Marine	ALAHDLRIQAAKQLFDGLTFSQATNTAEWDALTCDEQMTIEDLIG
Ga0208669_10087661	3300025099	Marine	AKQLFDGLTFSQATTTSEWDELTCDEQMTIEDLIG
Ga0208669_10173538	3300025099	Marine	YINPLINHKKSNIMENINTSALAHDLRIQAAKQLFDGLTFSQATNTSEWDALTCDEQMTIEDLIG
Ga0208793_10452553	3300025108	Marine	MKNIKTSALAHDLRIQAAKRLFDGLTFSQATNTAEWDALTCDEQMTIEDLIG
Ga0208158_11457431	3300025110	Marine	MDNQLIQDLRMQAVRSLFDGLTFDQATNTSDWDELTCDEQMRLEDLINS
Ga0208919_10281901	3300025128	Marine	MDNQLIQDLRMQAVRSLFDGLTFNQATNTADWDALSCDEQMRLEDLINSES
Ga0208919_10884852	3300025128	Marine	MENINTSALAHDLRIQAAKQLFDGLTFSQATNTSEWDALTCDEQMTI
Ga0208919_12144431	3300025128	Marine	TSALAHDLRIQAAKQLFDGLTFSQATTTSEWDELTCDEQMTIEDLIG
Ga0208919_12374831	3300025128	Marine	MENRNLINDLRVEAVRSLFDGLTFNQATNTAEWDSLTCDEQMTIEDLIG
Ga0209232_10294831	3300025132	Marine	MDKNLIQDLRMQAVKSLFDGLTFNQATNTSDWDELTCDEQMRLEDLINS
Ga0208299_10135444	3300025133	Marine	MKNIKTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDALSCDEQMTIEDLIG
Ga0209634_10163735	3300025138	Marine	MENINTSALAHDLRMEAMRSLFDGLTFNQATTTSEWDALTCDDQMTLEDLIG
Ga0209634_11002892	3300025138	Marine	MENIKTSALAHDLRIEAAKQLFDGLTFSQATNTAEWDALSCDEQMTIEDLIG
Ga0209756_10863135	3300025141	Marine	MKNIKTSALAHDLRIQAAKRLFDGLTFSQATTTSEWDALTCDEQMTLEDLIG
Ga0209337_10210231	3300025168	Marine	NIKTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDALSCDEQMTIEDLIG
Ga0209337_11541804	3300025168	Marine	APQNDTLAHDLRVQAMKNLFEGLDFSQITTTSEWDALTCDDQMTLEDLIGS
Ga0209337_12073932	3300025168	Marine	MKNIKTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDALSCDE
Ga0209337_12090384	3300025168	Marine	AHDLRIQAAKQLFDGLTFSQATTTSEWDELTCDEQMTIEDLIG
Ga0208032_10095449	3300025266	Deep Ocean	MENIKTSALAQDLRIQAAKQLFDGLTFSQATTTNEWDAMKCDDQMTIEDLIG
Ga0208180_10950752	3300025277	Deep Ocean	MDNQLIQDLRMQAVKSLFDGLTFNQATNTSDWDELTCDEQMRLEDLINS
Ga0208450_10757402	3300025301	Deep Ocean	MDNQLIQDLRMQAVRSLFDGLTFNQATNTSDWDELTCDEQMRLEDLINS
Ga0208148_11129001	3300025508	Aqueous	MDKIKTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDELTCDE
Ga0209304_10170873	3300025577	Pelagic Marine	MKNINTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDALTCDEQMTIEDLIG
Ga0208134_11134042	3300025652	Aqueous	MENINTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDALTCDEQMTIEDLI
Ga0208899_100560711	3300025759	Aqueous	MENIKTSALAHDLRIEAAKQLFDGLTFSQATNTAEWDALNCDEQMTIEDLIG
Ga0209815_11497732	3300027714	Marine	MENIKTSALAHDLRMEAMRSLFDGLTFNQATTTSEWDALTCDDQMTLEDLIGTA
Ga0209091_101814551	3300027801	Marine	APQNDTLARDLRVQAMKNLFEGLDFSQITTTSEWDALTCDDQMTLEDLIGS
Ga0183748_100881611	3300029319	Marine	MDNQLLQDLRMQAVRALFDGLTFDQATNTSDWDELTCDEQMRLEDLINSES
Ga0183755_100113025	3300029448	Marine	MDKIKTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDELTC
Ga0183755_100165420	3300029448	Marine	MENIKTSALAHDLRMEAMRSLFDGLTFNQATTTSEWDALTCDDQMTLEDLIG
Ga0183755_10207242	3300029448	Marine	MDKINTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDELTCDEQMTIEDLIG
Ga0183757_10012097	3300029787	Marine	MDNQLIQDLRMQAVRSLFDGLTFDQATNTADWDALSCDEQMRLEDLINS
Ga0307488_103400464	3300031519	Sackhole Brine	MLSFLNHINSNIMDKINTSALAHDLRIQAAKQLFDGLTFSQATTTSEWDELTCDEQMTIEDLIG
Ga0302118_103549721	3300031627	Marine	MNNINASALAHDLRVEAMRSLFDGLTFNQVTTTSEWDDLTCDEQMTLEDLINS
Ga0315316_115629752	3300032011	Seawater	MENKNLINDLRVEAVRSLFDGLTFNQATNTAEWDALTCDEQMTIEDLIG
Ga0314858_145217_454_609	3300033742	Sea-Ice Brine	NFNASALAHDLRVEAMKSLFNGLTFNQVTTTSEWDDLTCDEQMTLEDLINS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F105933

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences