Basic Information | |
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Family ID | F105864 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 100 |
Average Sequence Length | 63 residues |
Representative Sequence | PVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKDLITMTLKIRGIQKRRPEIK |
Number of Associated Samples | 85 |
Number of Associated Scaffolds | 100 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 3.00 % |
% of genes from short scaffolds (< 2000 bps) | 3.00 % |
Associated GOLD sequencing projects | 84 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.28 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (98.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine (18.000 % of family members) |
Environment Ontology (ENVO) | Unclassified (66.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (82.000 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 33.71% β-sheet: 0.00% Coil/Unstructured: 66.29% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.28 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Seawater Seawater Marine Marine Surface Seawater Marine Marine Seawater Marine Surface Water Marine Estuary Water Marine Seawater Estuarine Marine Methane Seep Mesocosm Pelagic Marine Freshwater And Marine Diffuse Vent Fluid, Hydrothermal Vents Diffuse Hydrothermal Fluids Hydrothermal Vent Plume Black Smokers Hydrothermal Plume Pond Water Water |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
LPaug09P16500mDRAFT_10202051 | 3300000142 | Marine | TNTPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKNLITMTLKTRGIQKRRPEIK* |
LPaug09P26500mDRAFT_10147171 | 3300000247 | Marine | FSHRATNFRPNILVTNTPVISMTSITKIIPEPGIVVSNLNIVSGRYFCGIRLLTSSKKNLMTMTLRARGIQKRRPEIK* |
LPfeb09P261000mDRAFT_10214152 | 3300000250 | Marine | MTNSTKIIPEPGIVVSKLNRASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK* |
LP_A_09_P04_1000DRAFT_10137491 | 3300000263 | Marine | MINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKNLITMTLKTRGIQKRRPEIK* |
LP_A_09_P04_500DRAFT_10142431 | 3300000264 | Marine | VTNTPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKNLITMTLKTRGIQKRRPEIK* |
BpDRAFT_102605971 | 3300000930 | Freshwater And Marine | PNILVTNTPVVSNINNTKIIPDPGIVASKLNIASGRYFCGTRLLINSKKNLITITLKIRGIQKRRPDIR* |
Mariner_10262691 | 3300001678 | Black Smokers Hydrothermal Plume | ILVTITPVISMTNSTKIIPEPGIVVSKLNRASGRYFCGTRLLISSKKNLITMTLKARGIQKRRPEIK* |
GBIDBA_101562961 | 3300001683 | Hydrothermal Vent Plume | ISMINSTKIIPEPGIVVSKLNRASGRYFCGTRLLISSKKNLITITLKARGIQKRRPEIK* |
GOS2242_10710834 | 3300001967 | Marine | GSIIKNNKIIPDPGIEVSKLNIASGKYFCGTRLLINSKKNLITMMLKIKGIQKRSPEIR* |
Ga0066867_102186781 | 3300005400 | Marine | NNPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKDLITMTLKIRGIQKRRPEIK* |
Ga0066847_100726541 | 3300005426 | Marine | NNPVISMINNTKIIPDPGIVVSKLNIASGRNFCGTRLLISSKKNLITMTLKIRGIQKRRPEIK* |
Ga0066846_100328641 | 3300005429 | Marine | PVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKDLITMTLKIRGIQKRRPEIK* |
Ga0066845_104442361 | 3300005432 | Marine | NTKIIPDPGIVVSKLNIASGRYFCGTILLISSRKDLITMILKIRGIQKRRPEIK* |
Ga0066827_100595631 | 3300005509 | Marine | TNFRPNILVTNNPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKDLITMTLKIRGIQKRRPEIK* |
Ga0078893_111422592 | 3300005837 | Marine Surface Water | IIIMNNKMIPEPGIVVSKLKIASGRYSCGTRLLINSKKNLITTIVKINGIQKRSPEIR* |
Ga0066380_102249302 | 3300005948 | Marine | SMTSNTKIIPEPGIVVSNLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK* |
Ga0066374_100031046 | 3300006012 | Marine | PVISMINNTKIIPDPGIVVSKLNIASGRNFCGTRLLISSKKNLITMTLKIRGIQKRRPEIK* |
Ga0066374_102035002 | 3300006012 | Marine | EPGIVVSNLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK* |
Ga0081592_10478713 | 3300006076 | Diffuse Hydrothermal Fluids | FSHRATNFRPNILVTNTPVISMISSTKIIPDPGIVVSKLNRASGKYFCGTRLLISSKKNLITMTLKARGIQKRRPEIK* |
Ga0066836_100473105 | 3300006166 | Marine | TNTPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKDLITMILKIRGIQKRRPEIK* |
Ga0068470_13666111 | 3300006308 | Marine | TKTPVISMTISTNRIPDPGIEVSKLNIASGKYFCGTRLLISSKKNLITMTVKARGTQKRRPEIK* |
Ga0068470_15020261 | 3300006308 | Marine | ISNTKIIPEPGIVEANLNITSGRYFCGTRLLISSKKNLITMTLKARGIQKRRPEIK* |
Ga0068470_15561312 | 3300006308 | Marine | SFRPNILVTITPVISMISNTKIIPEPGIVVSNLNIASGRYFCGIRLLISSKKNLITKTLKARGIQKRRPEIK* |
Ga0068479_12035392 | 3300006309 | Marine | MTISTKIIPDPGIVVSKLNIASGKYFCGIRLLISSKKNLITMTVKARGTQKRRPEIK* |
Ga0068471_14162881 | 3300006310 | Marine | ISMTSNTKIIPDPGIVVSNLNIASGKYFCGIRLLTSSKKNLITMTLRARGIQKRRPEIK* |
Ga0068471_16322822 | 3300006310 | Marine | SILVTITPVISMTNNTKIIPEPGIVVSNLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK* |
Ga0068473_11940821 | 3300006316 | Marine | RPNILVTITPVISMTNNTKIIPDPGIVVSKLKIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK* |
Ga0068497_13751002 | 3300006323 | Marine | MTSNTKIIPEPGIVVSNLNIASGRYFCGIRLLTSSKKNLITMPLKARGIQKRRPEIK* |
Ga0068497_13767842 | 3300006323 | Marine | NMLVTNTPVISMTSNTKIMPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK* |
Ga0068476_14756542 | 3300006324 | Marine | PEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTVKARGIQKRRPEIK* |
Ga0068476_14790402 | 3300006324 | Marine | PEPGIVVSNLKITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK* |
Ga0068488_12420951 | 3300006331 | Marine | RPNMFVTITPVMSMINSTKIIPEPGIVVSKLNIASGRYFCGIRLLLSSKKNLITKTLRARGIQKRRPEIK* |
Ga0068480_13550061 | 3300006335 | Marine | RATSFRPNILVTNTPVISMTINTKIIPEPGIVVSNLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK* |
Ga0068480_14093983 | 3300006335 | Marine | MISNTKIIPEPGIVVSKLNRASGRYYCGTRLLISSKKNLITMTLKARGIQKRRPEIK* |
Ga0068502_14469732 | 3300006336 | Marine | KIIPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKTRGIQKRRPEIK* |
Ga0068482_13393973 | 3300006338 | Marine | RATNFRPNILVTITPVISMTSNTKIIPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK* |
Ga0068481_14604363 | 3300006339 | Marine | VTITPVISMTNSTKIIPEPGIVVSKLKIASGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK* |
Ga0068481_15781711 | 3300006339 | Marine | PKILVTITPVISMTSNTKIIPEPGIVVSNLKITSGRYLCGTRLLTSSKKNLITMTLKARGIQKRRPEIK* |
Ga0068493_105361142 | 3300006341 | Marine | PIYPFTPVISMTINTKIIPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK* |
Ga0068493_106618271 | 3300006341 | Marine | PEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK* |
Ga0099957_11248234 | 3300006414 | Marine | SFRPNMLVTITPVMNMTISTKIIPEPGIAVSKLNRASGKYFCGTRLLISSKKNLTTKTVKARGTQKRRPEIK* |
Ga0079242_12621363 | 3300007338 | Marine | LVTNTPVISMINNTKIIPDPGIVVSKLNITSGRYCCGIRLLISSRKDLITMTVKIRGIQKRRPEIK* |
Ga0105020_10654935 | 3300007514 | Marine | TPVISMINNTKIIPDPGIVVSKLNIASGRYFCGMILLISSKKDLITMILKIRGIQKRRPEIK* |
Ga0105020_13524141 | 3300007514 | Marine | SMIISTKIIPDPGILVSKLNMASGKYFCGTRLLISSKKNLITKTVKARGTQKRRPEIK* |
Ga0102948_10838442 | 3300007623 | Water | VSHRVTNLLPNILVTNNPVISNINNTKIIPDPGIVLSKLNTASGRYFCGIRLLINSKKNLITIILKIRGIQKRRPEIR* |
Ga0102824_11090441 | 3300007681 | Estuarine | TPVVSNINNTKIIPDPGIVASKLNIASGRYFCGTRLLINSKKNLITITLKIRGIQKRRPDIR* |
Ga0102827_11382913 | 3300007715 | Estuarine | NILVTNNPVISNINNTKIIPEPGIVVSKLNIASGRYFCGTRLLINSRKNLITITLRIRGIQKRRPEIR* |
Ga0105674_13509822 | 3300007776 | Diffuse Vent Fluid, Hydrothermal Vents | PVISMTSITKIIPEPGIVVSNLNIVSGRYFCGIRLLTSSKKNLMTMTLRARGIQKRRPEIK* |
Ga0105744_11288713 | 3300007863 | Estuary Water | RSFSHRATNLLPNILVTNTPVISNINNTKIIPEPGMVVSKLNIASGRYFCGTRLLINSKKNFITIILRIRGIQKRRPEIR* |
Ga0105748_100073531 | 3300007992 | Estuary Water | HKATNLFPNILVTNTPVVSNINNTKIIPDPGIVASILNIASGRYFCGTRLLINSKKNLITITLKIRGIQKRRPDIR* |
Ga0105350_101196921 | 3300008224 | Methane Seep Mesocosm | PDPGIVVSKLNIASGRYFCGTRLLISSKKNLITMTLKTRGIQKRRPEIK* |
Ga0105352_11050451 | 3300008225 | Methane Seep Mesocosm | TPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKNLITMTVKARGIQKRRPEIK* |
Ga0105349_100700841 | 3300008253 | Methane Seep Mesocosm | VTNTPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLTRLLISSMKNLITMTLKIRGIQKRRPEIK* |
Ga0105351_11221711 | 3300008254 | Methane Seep Mesocosm | KIIPDPGIVVSKLNIASGRYFCGTRLLTRLLISSMKNLITMTLKIRGIQKRRPEIK* |
Ga0115660_10777641 | 3300008738 | Marine | ISMTISTKIIPDPGIFVSKLNIASGKYFCGTRLLISSKKNLITRTVKARGTQKRRPEIK* |
Ga0102889_12553712 | 3300008964 | Estuarine | ATNLFPNILVTNTPVVSNINNTKIIPDPGIVASKLNIASGRYFCGTRLLINSKKNLITITLKIRGIQKRRPDIR* |
Ga0117902_17455871 | 3300009104 | Marine | GIVVSKSNITSGRYCCGIRLLISSRKDLITMTVKIRGIQKRRPEIK* |
Ga0117925_10311001 | 3300009110 | Marine | PNILVTNTPVISMINNTKIIPDPGIVVSKLNIASGRYFCGMILLISSKKDLITMILKIRGIQKRRPEIK* |
Ga0117928_10436381 | 3300009339 | Marine | LVTKTPVISMTSSTKKIPEPGIVVSKLNIASGRYLCGTRLFTSSKKNLITRTVKARGTQKRRPEIK* |
Ga0118722_10540446 | 3300009376 | Marine | NILVTNTPVISMINNTKIIPDPGIVVSKLNIASGRYFCGMILLISSKKDLITMILKIRGIQKRRPEIK* |
Ga0118722_10785175 | 3300009376 | Marine | NILVTNTPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKDLITMTLKIRGIQKRRPEIK* |
Ga0115569_102403363 | 3300009497 | Pelagic Marine | TKIIPEPGIVASKLNIASGRYFCGTRLLINSKKNLITITLKIRGIQKRRPDIR* |
Ga0115011_103207831 | 3300009593 | Marine | MIINTNIIPDPGIVVSKLNIASGRYFCGMILLISSRKDLITMILKIRGIQKRRPEIK* |
Ga0138365_11633191 | 3300011325 | Marine | MLVTNTPVISMINNTKIIPDPGIVVSKSNITSGRYYCGIRLLISSRKDLITMTLKIRGIQKRRPEIK* |
Ga0163110_100746903 | 3300012928 | Surface Seawater | TNTPVIRIIMNNKIIPDPGIVVSKLKIASGRYSCGTRLLINSKKNLITTIVKIKGIQKRSPEIR* |
Ga0163179_100504311 | 3300012953 | Seawater | KIIPDPGIVVSKSNITSGRYCCGIRLLISSRKDLITMILKIRGIQKRRPEMK* |
Ga0163111_101867094 | 3300012954 | Surface Seawater | KNNKMIPEPGIVVSKLKIASGRYSFGTRLLINSKKNLITITVNIKGIQKRRPEIR* |
Ga0163111_105106331 | 3300012954 | Surface Seawater | RIIPDPGIEVSKLNMASGRYSCGTRLLINSKKNLMTIIDRIKGIQKRSPEIR* |
Ga0134299_10630851 | 3300014959 | Marine | KINNTKIIPEPGMVVSKLNIASGRYFCGTRLLINSKKNLITITLRIRGIQKRRPEIR* |
Ga0211629_11248562 | 3300020273 | Marine | SFRPNILVTITPVISMTSNTKIIPEPGIVVSNLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK |
Ga0211592_10929522 | 3300020341 | Marine | NIPVISIIKNSRIIPDPGIEVSKLNIASGRYSXGTRLLINSKKNLMTIIVKIKGIQKRSPEIR |
Ga0211675_102341532 | 3300020391 | Marine | NIPVVSIIKNSNIIPDPGIEVSKLNIASGRYSCGTRLLINSKKNFMTIIVRIKGIQKRSPEIR |
Ga0211636_102413501 | 3300020400 | Marine | SRIIPDPGIEVSKLNIASGRYSXGTRLLINSKKNLMTIIVKIKGIQKRSPEIR |
Ga0211622_100712672 | 3300020430 | Marine | IIKNSRIIPDPGIEVSKLNMASGRYSCGTRLLINSKKNLMTIIVRIKGIQKRSPEIR |
Ga0211578_101793681 | 3300020444 | Marine | NILVTITPVISMTISTKIIPDPGIVVSKLNIASGKYFCGTRLLISSKKNLTTKTVKARGTQKRRPEIK |
Ga0206684_11441081 | 3300021068 | Seawater | NILVTNTPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKDLITMTLKIRGIQKRRPEIK |
Ga0206678_105815791 | 3300021084 | Seawater | INNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKDLITMTLKIRGIQKRRPEIK |
Ga0206679_104620741 | 3300021089 | Seawater | NTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKDLITMTLKIRGIQKRRPEIK |
Ga0206680_100301043 | 3300021352 | Seawater | SMTINTKIIPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK |
Ga0209184_10444872 | 3300025465 | Methane Seep Mesocosm | HRATNFRPNILVTNTPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKNLITMTLKTRGIQKRRPEIK |
Ga0209494_10519841 | 3300025673 | Methane Seep Mesocosm | MINNTKIIPDPGIVVSKLNIASGRYFCGTRLLTRLLISSMKNLITMTLKIRGIQKRRPEI |
Ga0209932_10266901 | 3300026183 | Pond Water | PDPGIVLSKLNTASGRYFCGIRLLINSKKNLITIILKIRGIQKRRPEIR |
Ga0208895_11007032 | 3300026207 | Marine | TKIIPDPGIVVSKLNIASGRNFCGTRLLISSKKNLITMTLKTRGIQKRRPEIK |
Ga0207991_10387343 | 3300026264 | Marine | VISMISSTKIIPDPGIVVSKLNITSGRYFCGTRLLISSKKNLITMTLKTRGIQKRRPEIK |
Ga0209228_11140012 | 3300027709 | Marine | ALSHRFTSLRPNILVTNTPVISMTISTKIIPDPGIVVSKLNIASGKYFCGIRLLISSKKNLITRTVKARGTQKRRPEIK |
Ga0209035_103149742 | 3300027827 | Marine | FRPNILVTNTPVISMTINTKIIPEPGIVVSNLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK |
Ga0233401_11053472 | 3300028127 | Seawater | VISKINNTKIIPEPGMVVSKLNIASGRYFCGTRLLINSKKNLITITLRIRGIQKRRPETR |
Ga0257113_11159861 | 3300028488 | Marine | ILVTITPVISMINSTKIIPEPGIVVSKLNRASGRYFCGTRLLISSKKNLITITLKARGIQKRRPEIK |
Ga0315328_103725611 | 3300031757 | Seawater | PNILVTNTPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKDLITMILKIRGIQKRRPEIK |
Ga0315326_105219861 | 3300031775 | Seawater | AFSHRATNFRPNMLVTNTPVISMTINTKIIPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK |
Ga0315318_101201821 | 3300031886 | Seawater | INNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKNLITMILKIRGIQKRRPEIK |
Ga0315318_105284022 | 3300031886 | Seawater | PVISMTNSTKIIPDPGIVVSKLNRASGKYFCGTRLLISSKKNLITKTVKARGTQKRRPEI |
Ga0315316_101075984 | 3300032011 | Seawater | MINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKDLITMILKIRGIQKRSPEIK |
Ga0315329_105247871 | 3300032048 | Seawater | NNTKIIPDPGIVVSKLNIASGRNFCGTRLLISSKKNLITMTLKIRGIQKRRPEIK |
Ga0315321_101934811 | 3300032088 | Seawater | RATSFRPNMLVTNTPVISMTINTKIIPEPGIVVSNLNITSGRYFCGTRLLTSSKKNLITMTLKARGIQKRRPEIK |
Ga0315321_108214181 | 3300032088 | Seawater | PEPGIVVSKLNIASGRYFCGTRLLINSRKNLITITLRIRGIQKRRPEIR |
Ga0315333_100645974 | 3300032130 | Seawater | TNNPVISMINNTKIIPDPGIVVSKLNIASGRYFCGTRLLISSKKDLITMILKIRGIQKRRPEIK |
Ga0310345_109628361 | 3300032278 | Seawater | NILVTNTPVISITSNTKIIPEPGIVVSNLNIASGRYFCGIRLLTSSKKNLITMTLKARGIQKRRPEIK |
Ga0310342_1018642861 | 3300032820 | Seawater | PNILVTNTPVISMTISTKRIPDPGIVVSKLNIASGKYFCGTILLISSKKNLTTKTVKARGTQKRRPEIK |
Ga0310342_1036845422 | 3300032820 | Seawater | SMTSNTKIIPEPGIVVSNLNIASGKYFCGTRLLISSKKNLITMTVKARGTQKRRPEIK |
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