Basic Information | |
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Family ID | F105836 |
Family Type | Metagenome |
Number of Sequences | 100 |
Average Sequence Length | 61 residues |
Representative Sequence | MGRKMAGPKKQEVPAKGANETRPGTPPGHFLNPDLQSDTARFLAEVKESIRRREATRGRLV |
Number of Associated Samples | 88 |
Number of Associated Scaffolds | 100 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 0.00 % |
% of genes from short scaffolds (< 2000 bps) | 0.00 % |
Associated GOLD sequencing projects | 86 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.40 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (100.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil (13.000 % of family members) |
Environment Ontology (ENVO) | Unclassified (31.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (44.000 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 30.34% β-sheet: 0.00% Coil/Unstructured: 69.66% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.40 |
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Visualization |
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Natural And Restored Wetlands Groundwater Sediment Soil Soil Terrestrial Soil Tropical Forest Soil Serpentine Soil Termite Nest Soil Soil Sugarcane Root And Bulk Soil Soil Soil Rice Paddy Soil Soil Tropical Forest Soil Corn, Switchgrass And Miscanthus Rhizosphere Corn Rhizosphere Switchgrass Rhizosphere Arabidopsis Rhizosphere Avena Fatua Rhizosphere Corn Rhizosphere Tabebuia Heterophylla Rhizosphere Miscanthus Rhizosphere Miscanthus Rhizosphere Miscanthus Rhizosphere Populus Rhizosphere Rhizosphere Miscanthus Rhizosphere Miscanthus Rhizosphere Switchgrass Rhizosphere Miscanthus Rhizosphere Corn Rhizosphere Arabidopsis Rhizosphere |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
INPhiseqgaiiFebDRAFT_1053181961 | 3300000364 | Soil | MGRKMAGPKEEKSAANKTNQSTAAPPPGHFLNSDLQSDTARFLAEVKAAIAQRQGRTTRGALG* |
JGI11615J12901_102977581 | 3300000953 | Soil | MGRNMSGPKKQEVPAKSENQAPLGTPPGHFLNPELQSDTARFLAELKESIRQREAIRGRLV* |
JGI10216J12902_1181139702 | 3300000956 | Soil | MGRKMAGPKEQKTPANTPDQSSQTAPPGHFLNAELESDTARFLAQLKESIRRREASLGRLV* |
C688J35102_1209079372 | 3300002568 | Soil | MAGPEREKDAANPHNPTPLRQPPGHFLNSELQSDTARFIAELKASILRRESARAGYSAE* |
soilL1_100454693 | 3300003267 | Sugarcane Root And Bulk Soil | MGRKMAGPKEQEVPAKSENHAHVGAPPGHFLNSDLQSDTARFLAELKESIQRRQEIRGRLV* |
soilL2_100304532 | 3300003319 | Sugarcane Root And Bulk Soil | MAGPEETKEAANGQDRADFPAPPGHFLNSDLQSDTARFLAELKASIRRREAARSGLSFG* |
soilH1_101899625 | 3300003321 | Sugarcane Root And Bulk Soil | MAGPKEQEVPAKSENHAHVGAPPGHFLNSDLQSDTARFLAELKESIQRRQEIRGRLV* |
Ga0055470_100772962 | 3300003992 | Natural And Restored Wetlands | MGRKMAGPKEQEAPANGANAAPVTTPPGHFLNADLQSDTARFLAELKESIRRREVSRGGLG* |
Ga0055465_101218632 | 3300004013 | Natural And Restored Wetlands | MAGPKEQEAPANGANAAPVTTPPGHFLNADLQSDTARFLAELKESIRRREVSRGGLG* |
Ga0062593_1000660083 | 3300004114 | Soil | MGGPKEEKIAANTADHGPTTPPPGHFLNSDLESDTARFLAELHASIARREERLARNALS* |
Ga0062593_1001479262 | 3300004114 | Soil | MGRKMAGPKRQETPAKSKNVSRWETPPGHFLNSDLQSDTARFLAELKESIRRRQETRGRLV* |
Ga0062593_1015112602 | 3300004114 | Soil | MFHRQMGRKMAGPDTQEVPAKTANPTSGKAPPGHFLNSDLESDTARFLAELKESIRRREELRGRLV* |
Ga0062589_1015744662 | 3300004156 | Soil | HRQMGRKMAGPKEQQMAADRPNPGSHPPPPGHFLNPDLQSDTARFLAELKESIRRRQETRGRLV* |
Ga0062590_1010205802 | 3300004157 | Soil | MGRKMAGPKAQKAPANSANPGSDRTPPGHFLNSDLQMDTARFLAELKESIRRRQETRGRLV* |
Ga0062595_1005793423 | 3300004479 | Soil | MAGPKEEKSAANKANQSTAAPPPGHFLNSDLQSDTARFLAEVKAAIAERQSRTTRGALG* |
Ga0062595_1009307262 | 3300004479 | Soil | MGRKMAGPKKHEIPAKVANTTRPGTPPGHFLNPDLQSDTARFLAELKESIRRREAARGRLV* |
Ga0062592_1009450881 | 3300004480 | Soil | MGRKMGGPKEEKIAANTADHGQTTPPPGHFLNSDLESDTARFLAELHASIARREERLARNALS* |
Ga0062592_1012320802 | 3300004480 | Soil | MGRKMAGPKKQEVPAKSGNPTPVGTPPGHFLNSDLQSDTARFLAELKESIRRRQEARGRLV* |
Ga0062592_1014087722 | 3300004480 | Soil | RVIHRFHRQMGRKMAGPKEQQMAADRPNPGSHPPPPGHFLNPDLQSDTARFLAELKESIRRRQETRGRLV* |
Ga0062592_1017329162 | 3300004480 | Soil | MGRKMVGPKEQKAPANGANPAPIRTPPGHFLNADLQSDTARFLAELKESIRRRQETRGRLV* |
Ga0062594_1014539652 | 3300005093 | Soil | MGRKMAGPEKQEVPAKRANPVPLKTPPGHFLNSDLESDTARFLAELKESIRRRQELSGRLV* |
Ga0070683_1000969002 | 3300005329 | Corn Rhizosphere | MAGPKKHEIPAKVANTTRPGTPPGHFLNPDLQSDTARFLAEVKESIRRREAARGRLV* |
Ga0070690_1011132181 | 3300005330 | Switchgrass Rhizosphere | MGRKMAGPKEQKAPASEANPAPIRTPPGHFLNSDLQSDTARFLAELKESIRRRQENHGRLV* |
Ga0070670_1000680224 | 3300005331 | Switchgrass Rhizosphere | MGRKMAGPKKQEVPAKGANETRPGTPPGHFLNPDLQSDTARFLAEVKESIRRREATRGRLV* |
Ga0066388_1005001502 | 3300005332 | Tropical Forest Soil | MGRNMAGPKEQKSAAKTANPSALAPPPGHFLNSDLQSDTARFLAELKESIRQREAIRGRMV* |
Ga0070660_1009988282 | 3300005339 | Corn Rhizosphere | MAGPKKHEVPAKVANTTRPGTPPGHFLNPDLQSDTARFLAEVKESIRRREATRGRLV* |
Ga0070668_1002759821 | 3300005347 | Switchgrass Rhizosphere | MGRKMAGPKEQKAPASEANPAPVRTPPGHFLNSDLQSDTARFLAELKESIRRRQETRGRLV* |
Ga0070669_1005238902 | 3300005353 | Switchgrass Rhizosphere | MAGPKEQKAPASEANPAPIRTPPGHFLNSDLQSDTARFLAEVKESIRRREAARGRLV* |
Ga0070675_1005595031 | 3300005354 | Miscanthus Rhizosphere | MAGPKKHEVPAKGANETRPGTPPGHFLNPDLQSDTARFLAEVKESIRRREAARGRLV* |
Ga0070671_1001972942 | 3300005355 | Switchgrass Rhizosphere | MAGPKKHEVPAKVANTTRPGTPPGHFLNPDLQSDTARFLAEVKESIRRREAARGRLV* |
Ga0070701_102606441 | 3300005438 | Corn, Switchgrass And Miscanthus Rhizosphere | MGRKMAGPKKHEVPAKVANTTRPGTPPGHFLNPDLQSDTARFLAEVKESIRRREAARGRLV* |
Ga0070700_1006483361 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MGRKMAGPKEQKAPASEANPAPVRTPPGHFLNSDLQSDTARFLAELKESIRRRQESRGRLV* |
Ga0070694_1000853502 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | MAGPKEQKAPASEANPAPVRTPPGHFLNSDLQSDTARFLAELKESIRRRQENHGRLV* |
Ga0070663_1006855672 | 3300005455 | Corn Rhizosphere | MFHRQMGRKMAGPDTQEVPAKTANPTFGKVPPGHFLNSDLESDTARFLAELKESIRRREELRGRLV* |
Ga0070678_1003561222 | 3300005456 | Miscanthus Rhizosphere | MAGPKKQEVPAKGANETRPGTPPGHFLNPDLQSDTARFLAEVKESIRRREAARGRLV* |
Ga0070662_1004755451 | 3300005457 | Corn Rhizosphere | GTYRVIHRFHRQMGRKMAGPKEQKAPASEANPAPVRTPPGHFLNSDLQSDTARFLAELKESIRRRQESRGRLF* |
Ga0070662_1005646682 | 3300005457 | Corn Rhizosphere | MGRKMAGPKEQKVPASEANPAPIRTPPGHFLNSDLQSDTARFLAELKESIRRRQENHGRLV* |
Ga0068867_1007164002 | 3300005459 | Miscanthus Rhizosphere | MAGPKEQKAPASEANPAPIRTPPGHFLNSDLQSDTARFLAELKESIRRRQETRGRLV* |
Ga0070679_1016641882 | 3300005530 | Corn Rhizosphere | RKMAGPKEQKAPASEANPAPIRTPPGHFLNSDLQSDTARFLAELKESIRRRQETRGRLV* |
Ga0068853_1007638862 | 3300005539 | Corn Rhizosphere | MGRKMAGPKEQEAPASEANPAPIRTPPGHFLNSDLQSDTARFLAELKESIRRRQETRGRLV* |
Ga0070696_1003072102 | 3300005546 | Corn, Switchgrass And Miscanthus Rhizosphere | MGRKMAGPKEQKAPASEANPAPIRTPPGHFLNSDLQSDTARFLAELKESIRRRQETRGRLV* |
Ga0070693_1000445682 | 3300005547 | Corn, Switchgrass And Miscanthus Rhizosphere | MAGPKEQKAPASEANPAPVRTPPGHFLNSDLQSDTARFLAELKESIRRRQESRGRLV* |
Ga0070704_1006404212 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | RVIHRFHRQMGRKMAGPKEQKAPASEANPAPIRTPPGHFLNSDLQSDTARFLAELKESIRRRQETRGRLV* |
Ga0068855_1021253822 | 3300005563 | Corn Rhizosphere | MGRKMAGPKEQKAPASEANPAPVRTPPGHFLNSDLQSDTARFLAELREAIRRREAGTKARLG* |
Ga0068857_1016584831 | 3300005577 | Corn Rhizosphere | MGRKMAGPKKHEIPAKVANTTRPGTPPGHFLNPDLQSDTARFLAEVKESIRRREAARGRLV* |
Ga0068866_107642392 | 3300005718 | Miscanthus Rhizosphere | MGRKMAGPKEQKAPASEANPAPVRTPPGHFLNSDLQSDTARFLAELKESIRRRQENHGRLV* |
Ga0075292_10424242 | 3300005887 | Rice Paddy Soil | MAGPNREKDAANSSNPAPMPPPPGHFLNSELQSDTARFLAELKDSIRRRQAAQAGSSAG* |
Ga0081455_100987402 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MAGPKAQKVPANSVNPDPERTPPGHFLNADLQTDTARFLAELKESIRRRQEIRGRLV* |
Ga0081455_101001561 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MGRKMAGPKAQKAPANSANPGPDRTPPGHFLNSDLQMDTARFLAELKESIRRRQEIRSRLV* |
Ga0081455_105384362 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MGRNMAGPKEQKSPANTADQSVAALPPGHFLNADLQSDTARFLAELKEAIRRRETLAPGRFG* |
Ga0082029_15801554 | 3300006169 | Termite Nest | AGPKEHKSPANTENPGLKRIPPGHFLNSDLQTDTARFLAELKESIRRRQEIRGRLV* |
Ga0075422_100077762 | 3300006196 | Populus Rhizosphere | MFHRQMGRKMAGPRKHEVPAKDANKARPGTPPGHFLNSDLESDTARFLAEVKESIRRRKAIRGRLV* |
Ga0097621_1012609842 | 3300006237 | Miscanthus Rhizosphere | IHRFHRQMGRKMAGPKEQKAPASEANPAPVRTPPGHFLNSDLQSDTARFLAELKESIRRRQESRGRLV* |
Ga0066653_104900452 | 3300006791 | Soil | MAGPKGDKIAANGSNPTPVAPPPGHFLNADLQSDTARFLAELRASIARREGRGARTALG* |
Ga0075428_1012817701 | 3300006844 | Populus Rhizosphere | MGRKMAGPKEEKSAANNANQSTAAPPPGHFLNSDLQSDTARFLAEVKAAIAERQSRTTRGALG* |
Ga0075419_106703092 | 3300006969 | Populus Rhizosphere | MFHRQMGRKMAGPRKHEVPAKDANKVRLGTPPGHFLNSDLESDTARFLAEVKESIRRRKAIRGRLV* |
Ga0111539_132823162 | 3300009094 | Populus Rhizosphere | MAGPKEQKAPASEANPAPIRTPPGHFLNSDLQSDTARFLAELKESIRRRQENHGRLV* |
Ga0105245_127530022 | 3300009098 | Miscanthus Rhizosphere | MFHRQMGRKMAGPKKHEVPAKGANEARPGTPPGHFLNSDLESDTARFLAEVKESIQRRKAIRGRLV* |
Ga0126315_104086191 | 3300010038 | Serpentine Soil | MAGPKKHEVPAKSANEARVGTPPGHFLNPDLQSDTARFLAEVKESIRRREAIRGRLV* |
Ga0126311_104269112 | 3300010045 | Serpentine Soil | MAGPKKQELPAKGANQATAGTPPGHFLNSDLQSDTARFLAELKESIRRREASRGRLV* |
Ga0126382_117219212 | 3300010047 | Tropical Forest Soil | MAGPKEQKSAAKTANPSALAPPPGHFLNSDLQSDTARFLAELKESIQRREESRGRLV* |
Ga0126306_103393491 | 3300010166 | Serpentine Soil | ERGGRGRSRVIHKFHRQMGRKMAGPKKHEVPAKSINEARAGTPPGYFLNSDLQSDTARFIAELKESIRRREASRGRLV* |
Ga0134127_132315142 | 3300010399 | Terrestrial Soil | IHRDMGRKMAGPKRQETPAKSKNVSRWETPPGHFLNSDLQSDTARFIAELKESIRRRQESRGRLV* |
Ga0150985_1002129032 | 3300012212 | Avena Fatua Rhizosphere | MFHRQMGRKMAGPKKHEVPAKGANETRAGTPPGHFLNPDLQSDTARFLAEVKESIRRREAIRGRLA* |
Ga0157288_102176402 | 3300012901 | Soil | MAGPKKHEVPAKGGNEARPETPPGHFLNSDLESDTARFLAEVKESIQRRKAIRSRLV* |
Ga0157291_102655541 | 3300012902 | Soil | MAGPKKHEVPAKSINEARAGTPPGHFLNSDLQSDTARFLAELKESIRRRQETRGRLV* |
Ga0157377_107514922 | 3300014745 | Miscanthus Rhizosphere | GPKEQKVPASEANPAPIRTPPGHFLNSDLQSDTARFLAELKESIRRRQENHGRLV* |
Ga0132258_122567222 | 3300015371 | Arabidopsis Rhizosphere | MAGPKRQETPAKSENVIRRETPPGHFLNPDLQSDTARFLAELKESIRRRQETRGRLV* |
Ga0132256_1005605722 | 3300015372 | Arabidopsis Rhizosphere | MFHRQMGRKMAGPDTQEIPAKTANPTSVKAPPGHFLNSDLESDTARFLAELKESIRRREELRGRLV* |
Ga0184608_104115821 | 3300018028 | Groundwater Sediment | MGRKMAGPKEKKNAANAPNPGAAPPPPGHFLTPDLESDTARFLAELREAIRRRENAHVGPASLG |
Ga0184624_101208872 | 3300018073 | Groundwater Sediment | MAGPKKQEVAANAPNPGAAPPPPGHFLNADLQSDTARFLAELKESIRRREARA |
Ga0173481_100446852 | 3300019356 | Soil | MGRKMAGPKKHEVPAKSANGARPGTPPGHFLNSDLESDTARFLAEVKESIQRRKAIRGRL |
Ga0182009_106549071 | 3300021445 | Soil | QKTPANTPDQSSQTAPPGHFLNAELESDTARFLAQLKESIRRREASLGRLV |
Ga0247786_10021312 | 3300022883 | Soil | MAGPKKHEVPAKSANGARPGTPPGHFLNSDLESDTARFLAEVKESIQRRKAIRGRLV |
Ga0247786_10978281 | 3300022883 | Soil | MAGPKKHEVPAKTANEARAGTPPGHFLNPDLQSDTARFIAELKESIRRREASRGRLV |
Ga0247795_10519461 | 3300022899 | Soil | GPKKQEVPAKGANETRPGTPPGHFLNPDLQSDTARFLAEVKESVQRRKAIRGRLV |
Ga0247794_101753141 | 3300024055 | Soil | RKMAGPKRQETPAKSKNVSRWETPPGHFLNSDLQSNTARFLAELKESIRRRQETRGRLV |
Ga0207687_102245321 | 3300025927 | Miscanthus Rhizosphere | PKKQEVPAKGANETRPGTPPGHFLNPDLQSDTARFLAEVKESIRRREATRGRLV |
Ga0207687_102415942 | 3300025927 | Miscanthus Rhizosphere | MFHRQMGRKMAGPDTQEVPAKTANPTSGKAPPGHFLNSDLESDTARFLAELKESIRRREELRGRLV |
Ga0207669_103209791 | 3300025937 | Miscanthus Rhizosphere | MAGPKEQKAPASEANPAPIRTPPGHFLNSDLQSDTARFLAELKESIRRRQENHGRLV |
Ga0207677_107148392 | 3300026023 | Miscanthus Rhizosphere | MAGPKKQEVPAKGANETRPGTPPGHFLNPDLQSDTARFLAEVKESIRRREAARGRLV |
Ga0207678_104169731 | 3300026067 | Corn Rhizosphere | MFHRQMGRKMAGPDTQEVPAKTANPTFGKVPPGHFLNSDLESDTARFLAELKESIRRREELRGRLV |
Ga0207468_10044262 | 3300027444 | Soil | MAGPKRQETPAKSKNVSRWETPPGHFLNPDLQSDTARFLAEVKESIRRREATRGRLV |
Ga0247821_109942421 | 3300028596 | Soil | MAGPKEQKAPASEANPGPIRTPPGHFLNSDLQSDTARFLAELKESIRRRQE |
Ga0307293_102135092 | 3300028711 | Soil | MGRKMAGPKEKKNAANAPNPGAAPPPPGHFLTPDLESDTARFLAELREAIRRRRENAHVGPASLG |
Ga0307315_100023104 | 3300028721 | Soil | MFHRQMGRKMAGPKKHEVPAKGANEARPGTPPGHFLNSDLESDTARFLAEVKESIRRRKATRGRLV |
Ga0307318_103351611 | 3300028744 | Soil | HKFHRQMGRKMAGPKKHEVPAKSANEARAGTPPGHFLNPDLQSDTARFIAELKESIRRREASRGRLV |
Ga0307297_101380001 | 3300028754 | Soil | AGGRGTTRVIHMFHRQMGRKMAGPKKHEAPAKGANETRAGTPPGHFLNPDLQSDTARFLAEVKESIRRREAIRGRLV |
Ga0307297_102881621 | 3300028754 | Soil | TTRVIHMFHRQMGRKMAGPKKHEVPAKGANEARPGTPPGHFLNSDLESDTARFLAEVKESIRRRKATRGRLV |
Ga0307292_101685351 | 3300028811 | Soil | EAPAKGANETRAGTPPGHFLNPDLQSDTARFLAEVKESIRRREAIRGRLV |
Ga0307289_102364702 | 3300028875 | Soil | EEMAGPKKHEAPAKGANETRAGTPPGHFLNPDLQSDTARFLAEVKESIRRREAIRGRLV |
Ga0307277_100044301 | 3300028881 | Soil | MFHRQMGRKMAGPKKHEAPAKGANETRAGTPPGHFLNPDLQSDTARFLAEVKESIRRREAIRGRLV |
Ga0307408_1000761301 | 3300031548 | Rhizosphere | MAGPKKHEVPAKTANEGRAGTPPGHFLNSDLQSDTARFIAELKESIRRREASRG |
Ga0310886_103784181 | 3300031562 | Soil | MFHRQMGRKMAGPRKHEVPAKDANKARPGTPPGHFLNSDLESDTARFLAEVKESI |
Ga0307413_100419062 | 3300031824 | Rhizosphere | MAGPKKHEVPAKTANEGRAGTPPGHFLNSDLQSDTARFIAELKESIRRREASRGRLV |
Ga0307410_111372361 | 3300031852 | Rhizosphere | MFHRQMGRKMAGPKKREVPAKGGNQTSPGTPPGHFLNSGLQSDTARFIAEVKESIRRREATGG |
Ga0308175_1004570674 | 3300031938 | Soil | MFHRQMGRKMAGPKKHEVPAKGANETRAGTPPGHFLNPDLQSDTARFLAEVKEAIRRREAIRGRLV |
Ga0307411_111785642 | 3300032005 | Rhizosphere | MAGPKKHEVPAKGGNQTSTGTPPGHFLNSGLQSDTARFIAEVKESIRRRE |
Ga0310895_101957471 | 3300032122 | Soil | GRKMAGPKKHEVPAKSANGARPGTPPGHFLNSDLESDTARFLAEVKESIQRRKAIRGRLV |
Ga0247829_117595502 | 3300033550 | Soil | MFHRQMGRKMAGPKKHEVPAKGANEARPGTPPGHFLNSDLESDTARFLAEVKESIRRRKAIRGRLV |
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