NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F105720

Metagenome / Metatranscriptome Family F105720

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105720
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 126 residues
Representative Sequence MRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYADNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA
Number of Associated Samples 92
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 76.00 %
% of genes near scaffold ends (potentially truncated) 29.00 %
% of genes from short scaffolds (< 2000 bps) 93.00 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil
(45.000 % of family members)
Environment Ontology (ENVO) Unclassified
(62.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(74.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 56.06%    β-sheet: 0.00%    Coil/Unstructured: 43.94%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF13727CoA_binding_3 7.00
PF01061ABC2_membrane 1.00
PF01207Dus 1.00
PF00275EPSP_synthase 1.00
PF07719TPR_2 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0042tRNA-dihydrouridine synthaseTranslation, ribosomal structure and biogenesis [J] 1.00


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.00 %
UnclassifiedrootN/A3.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005172|Ga0066683_10126922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1558Open in IMG/M
3300005179|Ga0066684_10543372All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300005180|Ga0066685_10650029All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium725Open in IMG/M
3300005181|Ga0066678_10139775All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1506Open in IMG/M
3300005184|Ga0066671_10348378All Organisms → cellular organisms → Bacteria939Open in IMG/M
3300005536|Ga0070697_101633458All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300005562|Ga0058697_10000650All Organisms → cellular organisms → Bacteria14358Open in IMG/M
3300005569|Ga0066705_10062266All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2128Open in IMG/M
3300006173|Ga0070716_101055022All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300006755|Ga0079222_11456644All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300006796|Ga0066665_10425131All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1098Open in IMG/M
3300009012|Ga0066710_100092785All Organisms → cellular organisms → Bacteria3999Open in IMG/M
3300009012|Ga0066710_104388967All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300009137|Ga0066709_100033138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria5524Open in IMG/M
3300009137|Ga0066709_101475146All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium983Open in IMG/M
3300009137|Ga0066709_103836789All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300010061|Ga0127462_155108All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300010071|Ga0127477_162205All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300010077|Ga0127437_100934All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300010081|Ga0127457_1040996All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300010092|Ga0127468_1108458All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300010093|Ga0127490_1063180All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300010094|Ga0127480_1075505All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300010096|Ga0127473_1102023All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300010097|Ga0127501_1009545All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300010100|Ga0127440_1117753All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300010101|Ga0127481_1018624All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300010110|Ga0126316_1102171All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300010113|Ga0127444_1094055All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300010118|Ga0127465_1159737All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300010120|Ga0127451_1049708All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300010121|Ga0127438_1068866All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300010122|Ga0127488_1070101All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300010123|Ga0127479_1154778All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300010124|Ga0127498_1105604All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300010125|Ga0127443_1115957All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300010127|Ga0127489_1004367All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300010130|Ga0127493_1144654All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300010133|Ga0127459_1038870All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300010134|Ga0127484_1079576All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300010139|Ga0127464_1158508All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300010145|Ga0126321_1302017All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300010145|Ga0126321_1485747All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2001Open in IMG/M
3300010146|Ga0126320_1040212All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300010146|Ga0126320_1392095All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300010146|Ga0126320_1533671All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300010152|Ga0126318_10742584All Organisms → cellular organisms → Bacteria742Open in IMG/M
3300010373|Ga0134128_12233037All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300010896|Ga0138111_1037086All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300010905|Ga0138112_1119214All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300011003|Ga0138514_100136819All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300012200|Ga0137382_10883279All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300012224|Ga0134028_1121396All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium529Open in IMG/M
3300012372|Ga0134037_1134511All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300012374|Ga0134039_1016395All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300012380|Ga0134047_1007504All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300012382|Ga0134038_1155313All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300012383|Ga0134033_1073799All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300012384|Ga0134036_1264785All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300012386|Ga0134046_1171033All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300012388|Ga0134031_1277837All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300012389|Ga0134040_1136215All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300012393|Ga0134052_1325268All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300012396|Ga0134057_1265710All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300012397|Ga0134056_1065100All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300012400|Ga0134048_1120100All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300012405|Ga0134041_1368563All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300012407|Ga0134050_1143211All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300012410|Ga0134060_1498060Not Available504Open in IMG/M
3300012975|Ga0134110_10264372All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium735Open in IMG/M
3300012977|Ga0134087_10369989All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300014488|Ga0182001_10031572All Organisms → cellular organisms → Bacteria1318Open in IMG/M
3300018071|Ga0184618_10153989All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium941Open in IMG/M
3300018482|Ga0066669_10774412All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300018482|Ga0066669_11547288All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300019279|Ga0184642_1671484All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300025939|Ga0207665_10218014All Organisms → cellular organisms → Bacteria1397Open in IMG/M
3300025939|Ga0207665_11099042All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300026300|Ga0209027_1006563All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4370Open in IMG/M
3300026312|Ga0209153_1063763All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1328Open in IMG/M
3300026552|Ga0209577_10206655All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1504Open in IMG/M
3300027750|Ga0209461_10042601All Organisms → cellular organisms → Bacteria901Open in IMG/M
3300027991|Ga0247683_1004668All Organisms → cellular organisms → Bacteria1200Open in IMG/M
3300028705|Ga0307276_10015925All Organisms → cellular organisms → Bacteria1415Open in IMG/M
3300028880|Ga0307300_10123725All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300030513|Ga0268242_1025187All Organisms → cellular organisms → Bacteria1027Open in IMG/M
3300030993|Ga0308190_1102976All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300031058|Ga0308189_10410869All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300031091|Ga0308201_10341686All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300031092|Ga0308204_10113247All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300031093|Ga0308197_10289263Not Available599Open in IMG/M
3300031094|Ga0308199_1129605Not Available582Open in IMG/M
3300031098|Ga0308191_1037524All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300031421|Ga0308194_10091741All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300031720|Ga0307469_11791968All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300032159|Ga0268251_10000014All Organisms → cellular organisms → Bacteria246323Open in IMG/M
3300032421|Ga0310812_10459404All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300034448|Ga0370540_08701All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300034680|Ga0370541_058508All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300034681|Ga0370546_079052All Organisms → cellular organisms → Bacteria549Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil45.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil8.00%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil7.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.00%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave2.00%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.00%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.00%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.00%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil1.00%
AgaveHost-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005562Agave microbial communities from Guanajuato, Mexico - As.Ma.eHost-AssociatedOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010061Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010071Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010077Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010081Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010092Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010093Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010094Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010096Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010097Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010100Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010101Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010110Soil microbial communities from Illinois, USA to study soil gas exchange rates - BV-IL-AGR metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010113Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010118Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010120Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010121Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010122Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010123Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010124Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010125Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010127Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010130Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010133Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010134Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010139Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010145Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010146Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010152Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010896Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010905Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011003Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012224Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012372Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012374Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012380Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012382Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012383Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012384Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012386Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012388Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012389Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012393Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012396Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012397Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012400Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012405Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012407Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012410Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014488Bulk soil microbial communities from Mexico - San Felipe (SF) metaGEnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027750Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)Host-AssociatedOpen in IMG/M
3300027991Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK24EnvironmentalOpen in IMG/M
3300028705Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300030513Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)EnvironmentalOpen in IMG/M
3300030993Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031094Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031098Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_186 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032159Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)Host-AssociatedOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300034448Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_115 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034680Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034681Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0066683_1012692223300005172SoilMRRGGVITAVTVLAAAVAIGAPGALAASPQQIYKDYADNGRLDGHYTKSDLQRALHDAVIQGYKPASSVAAVIHKKLSSPKSGVAGASLPAAKKQGALPFTGLDLALMTIGGFSLLLLGGALRRFARNKA*
Ga0066684_1054337223300005179SoilMRRGRIFTVVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDKHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSSGGVAGAKLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFAR
Ga0066685_1065002913300005180SoilPQQIYKDYADNGRLDGHYTKSDLQRALHDAVIQGYKPASSVAAVIHKKLSSPKSGVAGASLPAAKKQGALPFTGLDLALMTIGGFSLLLLGGALRRFARNKA*
Ga0066678_1013977523300005181SoilLDKTYSKADLSRALHDAVIQGYKKPTNNGIVPAIKTQVSSGKGGVAGASLPAAKRQGTLPFTGTDLALMTVGGFSLLLLGGALRRFARNKA*
Ga0066671_1034837823300005184SoilMRRGRIFTVVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSSGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0070697_10163345813300005536Corn, Switchgrass And Miscanthus RhizosphereQIIKDYQDNGRLDGHYSKADLSRALKDAVIQGYSKPTNNGIVPAIKTQVNKSSGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0058697_10000650103300005562AgaveLAGAAVVGVPGAFAATPQQIYKDYADNGRLDGHYSKADLSRALKNAVIQGYGKPTTNKGIVPAIKTQQNKSSGGVAGVSLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0066705_1006226623300005569SoilMRRGRIFTAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDRHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSTGGVAGASLPTAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0070716_10105502213300006173Corn, Switchgrass And Miscanthus RhizospherePTSKEETGGSKDDVLGSLRLPEEGEKTEKGRRTSSGATVVIGRETAVHRREREMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYKDNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSSGGVAGASLPAAKKQGSLPFTGYDLGLMTAGGFAFLLLGGALRRFARNKA*
Ga0079222_1145664423300006755Agricultural SoilMRRGRIITGIAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALQDAVIQGYGRPTKTGIVPAIKTQVNKSTGGVAGARLPAAKKQGSLPFTGADLALMTAGGLSLLLLGGTLRRFARNKA*
Ga0066665_1042513123300006796SoilMRRGGVITAVTVLAAAVAIGAPGALAASPQQIYKDYADNGRLDGHYSKGDLQRALHDAVIQGYKPASSVAAVIHKKLNSPKSGVAGASLPAAKKQGALPFTGLDLALMTIGGFSLLLLGGALRRFARNKA*
Ga0066710_10009278533300009012Grasslands SoilMRRGGVITAVTVLAAAVAIGAPGALAASPQQIYKDYADNGRLDGHYTKSDLQRALHDAVIQGYKPASSVAAVIHKKLSSPKSGVAGASLPAAKKQGALPFTGLDLALMTIGGFSLLLLGGALRRFARNKA
Ga0066710_10438896723300009012Grasslands SoilTPQQIYKDYADNGRLDGHYTKSDLQRALHDAVIQGYKPTTSVAPAIKKKINQSGVAGANLPAAKRQGALPFTGLDLALMTIGGFSLLLLGGALRRFARNKA
Ga0066709_10003313843300009137Grasslands SoilVTVLAAAVAIGAPGALAASPQQIYKDYADNGRLDGHYTKSDLQRALHDAVIQGYKPASSVAAVIHKKLSSPKSGVAGASLPAAKKQGALPFTGLDLALMTIGGFSLLLLGGALRRFARNKA*
Ga0066709_10147514613300009137Grasslands SoilLAATPQQIYKDYADNGRLDGHYSKGDLQRALHDAVIQGYKPATSVAPAIKKKISSPSSGVAGPNLPAAKKQGALPSTGLDLALMTVGGFSLLLLGGALRRFARNKA*
Ga0066709_10383678923300009137Grasslands SoilFAAKPQQIYKDYQDNGRLDRHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGGLRRFARNKA*
Ga0127462_15510813300010061Grasslands SoilVTVLAAAVAIGAPGALAASPQQIYKDYADNGRLDGHYTKSDLQLALHDAVIQGYKPASSVAAVIHKKLSSPKSGVAGASLPAAKKQGALPFTGLDLALMTIGGFSLLLLGGALRRFARNKA*
Ga0127477_16220513300010071Grasslands SoilLAGAAVVGVPGAFAATPQQIYKDYQDNGRLDKHYSKADLSRALKDAVIQGYSKPTSNGIVPAIKTQVNKSSGGVAGAKQLPAAKKQGSLPFTGYDLGLMTAGGFAFLLLGGALRRFARNKA*
Ga0127437_10093413300010077Grasslands SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIIKDYQDNGRLDRHYSKADLSRALKDAVIQGYSKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGYDLGLMTAGGFAFLLLGGALRRFARNKA*
Ga0127457_104099613300010081Grasslands SoilLAGAAVVGVPGAFAATPQQIIKDYRDNGRLDRQYSKADLSRALKDAVIQGYSKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA
Ga0127468_110845813300010092Grasslands SoilVTVLAAAVAIGAPGALAASPQQIYKDYADNGRLDGHYTKSDLQRALHDAVIQGYKPASSVAAVIHKKLSSPKSGVAGASLPAAKKQGALPFTGLDLALMTVGGFSLLLLGAALRRFAGNKA*
Ga0127490_106318013300010093Grasslands SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSSGIVPAIKTQQNKSSGGVAGAKLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA
Ga0127480_107550513300010094Grasslands SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYNDYKDNGRLDGHYSKADLSRSLKDAVIQGYSKPTKTGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTAGGLSLLLLGGALRRFARNKA*
Ga0127473_110202313300010096Grasslands SoilMRRGRIFTAVAALAGAAVVGVPGALAATPQQIYKDYQDNGRLDRHYSKADLSRALKDAVIQGYKKPTSSGIVPAIKTQQNKSTGGVAGASLPKAKKQGSLPFTGADLALMTVGGFSLLLLGG
Ga0127501_100954513300010097Grasslands SoilLAGAAVVGVPGAFAATPQQIYKDYADNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA
Ga0127440_111775313300010100Grasslands SoilVTVLAAAVAIGAPGALAASPQQIYKDYADNGRLDGHYTKSDLQRALHDAVIQGYKPASSVAAVIHKKLNSPKSGVAGASLPAAKKQGALPFTGLDLALMTIGGFSLLLLGGALRRFARNKA*
Ga0127481_101862413300010101Grasslands SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYADNGRLDKTYSKADLSRALHDAVIQGYKKPTSNGIVPAIKTQVNKGTGGVAGASLPAAKKQGSLPFTGADLALMTVGGLSLLLLGGALRRFARNKA*
Ga0126316_110217113300010110SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIIKDYQDNGRLDGHYSKADLSRALKDAVIQGYSKPTNNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0127444_109405513300010113Grasslands SoilLAGAAVVGVPGAFAATPQQIYKDYADNGRLDGHYSKADLQRALHDAVIQGYKPATSVAPAIKKKISSPSSGVAGAKLPAAKKQGALPFTGLDLALMTVGGFSLLLLGAALRRFAGNKA*
Ga0127465_115973713300010118Grasslands SoilMRRGRVITGIAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSSGIVPAIKTQQNKSTGGVAGASLPKAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0127451_104970813300010120Grasslands SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSSGIVPAIKTQQNKSSGGVAGAKLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRLARNKA*
Ga0127438_106886613300010121Grasslands SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYADNGRLDGHYSKADLQRALHDAVIQGYKPATSVAPAIKKKISSPSSGVAGAKLPAAKKQGALPFTGLDLALMTVGGFSLLLLGAALRRFAGNKA*
Ga0127488_107010113300010122Grasslands SoilLAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSSGIVPAIKTQQNKSSGGVAGAKLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA
Ga0127479_115477813300010123Grasslands SoilMRRGRIITGIAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSSGIVPAIKTQQNKSTGGVAGASLPKAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0127498_110560413300010124Grasslands SoilVTVLAAAVPIGAPGALAASPQQIYKDYADNGRLDGHYTKSDLQRALHDAVIQGYKPASSVAAVIHKKLSSPKSGVAGASLPAAKKQGALPFTGLDLALMTIGGFSLLLLGGALRRFARNKA*
Ga0127443_111595713300010125Grasslands SoilRRKFGSLGLSEEGEDGEVGRRTYRDATVVIGRETAVHRREREMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYNDYKDNGRLDGHYSKADLSRALKDAVIQGYSKPTSNGIVPAIKTQVNKSSGGVAGAKLPAAKKQGSLPFTGYDLGLMTAGGFAFLLLGGALRRFARNKA*
Ga0127489_100436713300010127Grasslands SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSSGGVAGAKLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0127493_114465413300010130Grasslands SoilLAGAAVVGVPGAFAATPQQIYKDYADNGRLDGHYSKADLSRALKDAVIQGYKKPTTSGIVPAIKTQVNKSTGGVAGANLPAAKKQGSLPFTGTDLVLMTVGGFAFLLLGGALRRFARNKA
Ga0127459_103887013300010133Grasslands SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYADNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0127484_107957613300010134Grasslands SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIIKDYQDNGRLDRHYSKADLSRALKDAVIQGYSKPTNNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0127464_115850813300010139Grasslands SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSSGIVPAIKTQQNKSTGGVAGASLPKAKKQGSLPFTGADLALMTVG
Ga0126321_130201713300010145SoilMITAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALQDAVIQGYKKPTSTGIVPAIKTQVNKGTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0126321_148574723300010145SoilMMIAVTAFAAAVAVGAPGALGATPQQIYKDYADNGRLDGRYSQADLRRALHDAVIQGYNRPTNNVAPTIKKKVNRPSSGVAGASLPKAKKQGALPFTGLDLALMTVGGFSLLLLGAALRRFARNRA*
Ga0126320_104021213300010146SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYRDYQDGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTAGGLSLLLLGGALRRFARNKA*
Ga0126320_139209513300010146SoilMRRGRIITGIAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQQNKSSGGVAGASLPAAKKQGSLPFTGYDLGLMTAGGFAFLLLGGALRRFARNKA*
Ga0126320_153367113300010146SoilMMVVTVACAVATAVAAPGALGATPKQIYKDYADNGRLDQNYSSADLKRALKDAVIQGYKKPTSTGIVPAIKTQVNKGTGGVAGASLPKAKQQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0126318_1074258423300010152SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYNDYKDNGRLDGHYSKADLSRALKDAVIQGYSRPTSNGIVPAIKTQVNKSSGGVAGAKKLPAAKKQGSLPFTGYDLGLMTAGGFAFLLLGGALRRFARNKA*
Ga0134128_1223303713300010373Terrestrial SoilREREMRRGRIITGIAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSSGGVAGASLPAAKKQGSLPFTGYDLGLMTAGGFAFLLLGGALRRFARNKA*
Ga0138111_103708623300010896Grasslands SoilMRRGRIITAVTALAGAAVVGVPGAFAATPQQIYKDYADNGRLDGHYSKADLSRALKDAVIQGYKKPTSSGIVPAIKTQQNKSSGGVAGAKLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0138112_111921413300010905Grasslands SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIIKDYRDNGRLDRQYSKADLSRALKDAVIQGYSKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0138514_10013681913300011003SoilYKDYADNGRLDGHYTKSDLQRALHDAVIQGYKPTTSVSPAIKKKINQSGVAGANLPAAKRQGALPFTGLDLALMTIGGFSLLLLGGALRRFARNKA*
Ga0137382_1088327913300012200Vadose Zone SoilMWRRFIVLGVLACAVGMFAVAPAFAASPQQVYRDYADNGRLDKTYSKADLSRALHDAVIQGYKKPTSNGIVPAIKTQVNSGTGGVAGAKLPTAKRQGTLPFTGADLALM
Ga0134028_112139623300012224Grasslands SoilRLDKTYSKADLSRALHDAVIQGYKKPTSNGIVPAIKTQVNSGTGGVAGAKLPTAKRQGTLPFTGADLALMTAGGFSLLLLGGALRRFARNKA*
Ga0134037_113451113300012372Grasslands SoilSEMRRGGVITAVTVLAAAVAIGAPGALAASPQQIYKDYADNGRLDGHYTKSDLQRALHDAVIQGYKPASSVAAVIHKKLSSPKSGVAGASLPAAKKQGALPFTGLDLALMTIGGFSLLLLGGALRRFARNKA*
Ga0134039_101639513300012374Grasslands SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDKHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSSGGVAGAKLPAAKKQGSLPFTGYDLALMTVGGFSLLLLGGGLRRFARNKA*
Ga0134047_100750423300012380Grasslands SoilGGVITAVTVLAAAVAIGAPGALAASPQQIYKDYADNGRLDGHYTKSDLQRALHDAVIQGYKPASSVAAVIHKKLSSPKSGVAGASLPAAKKQGALPFTGLDLALMTIGGFSLLLLGGALRRFARNKA*
Ga0134038_115531323300012382Grasslands SoilEREMRRGRIITAVAALAGAAVVGVPGAFAATPQQIIKDYRDNGRLDRQYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSTGGVAGASLPTAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0134033_107379913300012383Grasslands SoilLAGAAVVGVPGAFAATPQQIYKDYADNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQKNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGGLRRFARNKA
Ga0134036_126478523300012384Grasslands SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDRHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSSGGVAGASLPAAKKQGSLPFTGYDLALMTVGGFSLLLLGGGLRRFARNKA*
Ga0134046_117103323300012386Grasslands SoilITAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSSGIVPAIKTQQNKSSGGVAGAKLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0134031_127783713300012388Grasslands SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDVHYSKADLSRALKDAVIQGYKKPTSSGIVPAIKTQQNKSSGGVAGAKLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0134040_113621513300012389Grasslands SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYADNGRLDGHYSKADLQRALHDAVIQGYKPATSVAPAIKKKISSPSSGVAGANLPAAKKQGALPFTGLDLALMTVGGFSLLLLGAALRRFAGNKA*
Ga0134052_132526813300012393Grasslands SoilLAGAAVVGVPGAFAATPQQIYKDYADNGRLDGHYSKADLSRALKDAVIQGYKKPTSNCIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA
Ga0134057_126571013300012396Grasslands SoilEMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYADNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0134056_106510013300012397Grasslands SoilLAGAAVVGVPGAFAATPQQIYKDYADNGRLNGHYSKADLIRALKDAVIQGYKKPTTSGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA
Ga0134048_112010023300012400Grasslands SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSSGIVPAIKTQQNKSSGGVAGAKLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0134041_136856313300012405Grasslands SoilLAGAAVVGVPGAFAATPQQIYKDYQDNGRLDKHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSSGGVAGAKLPAAKKQGSLPFTGYDLALMTVGGFSLLLLGGGLRRFARNKA
Ga0134050_114321123300012407Grasslands SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTRKNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA*
Ga0134060_149806013300012410Grasslands SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIIKHYRDNGRLDRQYSKADLSRALKDAVIQGYSKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGTDLVLMTVGGFAFLLLGGALRRFARDKA*
Ga0134110_1026437223300012975Grasslands SoilGRLDGHYSKSYLQRALHDAVIQGYKPATSVAPAIKKKISSPSSGVAGAKLPAAKKQGALPFTGLDLALMTVGGFSLLLLGAALRRFAGNKA*
Ga0134087_1036998913300012977Grasslands SoilMRRGRIITVVTAFAAAVAVGAPGALAATPQQIYNDYAKHGKLTGHYSRGDLERALHDAVIQGYKPATSVAPAIKKKISQPSSGVAGASLPAAKKQGALPFTGLDLALMTVGGFSLLLL
Ga0182001_1003157223300014488SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYADNGRLDKQYSKADLSRALKDAVIQGYKKPTSTGIVPAIKTQVNKGTGGVAGASLPKAKKQGSLPFTGADLALMTVGGFSLLLLGGGLRRFARNKA*
Ga0184618_1015398923300018071Groundwater SedimentKDYADNGRLDGQYSRGDLQRALHDAVIQGYKPATSVAPAIHKKLSSPSSGVAGAVKQQGTLPFTGFDLALMAVGGFSLLALGAGLRRFARNKA
Ga0066669_1077441213300018482Grasslands SoilMRRGGVITAVTVLAAAVAIGAPGALAASPQQIYKDYADKGRLDGHYTKSDLQRALHDVVIQGYKPASSVAAVIHKKLSSPSSGVAGASLPVAKKQGALPFTGLDLALMSVGGFSLLLLGAALRRFGRSKA
Ga0066669_1154728813300018482Grasslands SoilTPQQIYKDYQDNGRLDRHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKGTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA
Ga0184642_167148423300019279Groundwater SedimentMRRGRIITSVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGLSLLLLGGALRRFARNKA
Ga0207665_1021801423300025939Corn, Switchgrass And Miscanthus RhizosphereMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYKDNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSSGGVAGASLPAAKKQGSLPFTGYDLGLMTAGGFAFLLLGGALRRFARNKA
Ga0207665_1109904213300025939Corn, Switchgrass And Miscanthus RhizosphereMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTTSGIVPAIKTQVNKSTGGVAGANLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA
Ga0209027_100656313300026300Grasslands SoilMRRVRTTGVLLGICGALLVGISTASAATPRQIYNDYVTHGRLTHHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKGTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGGLRRFARNKA
Ga0209153_106376313300026312SoilEMRRGRIFTAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSSGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA
Ga0209577_1020665523300026552SoilMRRGRIFTVVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDKHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSSGGVAGAKLPAAKKQGSLPFTGYDLALMTVGGFSLLLLGGGLRRFARNKA
Ga0209461_1004260123300027750AgaveVPGAFAATPQQIYKDYADNGRLDGHYSKADLSRALKNAVIQGYGKPTTNKGIVPAIKTQQNKSSGGVAGVSLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA
Ga0247683_100466813300027991SoilMWRRVLVLGVLACAVAVFTAVPVAFGATPQQIYKDYADNGRLDGHYSKADLSRALKDAVIQGYSKPTSNGIVPAIKTQVNKGSGGVAGAKLPAAKKAGSLPFTGYDLGLMTAGGFAFLLLGGALRRFARNKA
Ga0307276_1001592523300028705SoilMRRGRIITVVAALAGAAVVGVPGAFAATPQQIYRDYQDGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTAGGLSLLLLGGALRRFARNKA
Ga0307300_1012372513300028880SoilMSRGRIIGSVTAFAAAVAVGAPGALGATPQQIYKDYADNGRLDGKYSRGDLQRALHDAVAQGYNKPTNNVAPTIKKKISSPSSGVAGANLPGAKQQGALPFTGLDLVLMTVGGFSLLLLGAALRRFARNRA
Ga0268242_102518713300030513SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYADNGRLDKQYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKGTGGVAGASLPKAKKQGSLPFTGADLALMTVGGFSLLLLGGGLRRFARNKA
Ga0308190_110297613300030993SoilMRRGRIITVVAALAGAAVVGVPGAFAATPQQIYRDYQDGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA
Ga0308189_1041086913300031058SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYRDYQDGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGLSLLLLGGALRRFARNKA
Ga0308201_1034168613300031091SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTAGGLSLLLLGGALRRFARNKA
Ga0308204_1011324713300031092SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGLSLLLLGGALRRFARNKA
Ga0308197_1028926313300031093SoilMRRGRIITAVAALAGAAVVAVPGAFAATPQQIYKDYQDGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKGTGGVAGASLPAAKKQGSLPFTGADLALMTVGGLSLLLLGGALRRFARNKA
Ga0308199_112960513300031094SoilMRRGRIITAVAALAGAAVVAVPGAFAATPQQIYKDYQDGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGLSLLLLGGALRRFARNKA
Ga0308191_103752413300031098SoilMRRGRIITAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTAGGLSLLLL
Ga0308194_1009174123300031421SoilMRRGRIFTAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVFQGYKKPTSNGIVPAIKTQVNKSSGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA
Ga0307469_1179196813300031720Hardwood Forest SoilEKGSRTSSDATVVIGRETAVHRREREMRRGRIITVVAALAGAAVVGVPGAFAATPQQIYKDYADNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKSTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA
Ga0268251_100000141103300032159AgaveLAGAAVVGVPGAFAATPQQIYKDYADNGRLDGHYSKADLSRALKNAVIQGYGKPTTNKGIVPAIKTQQNKSSGGVAGVSLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNK
Ga0310812_1045940423300032421SoilTPQQIYKDYADNGRLDGHYSKADLSRALKDAVIQGYSKPTSNGIVPAIKTQVNKGSGGVAGAKLPAAKKAGSLPFTGYDLGLMTAGGFAFLLLGGALRRFARNKA
Ga0370540_08701_77_4723300034448SoilMRRGRIITVVAALAGAAVVGVPGAFAATPQQIYRDYQDGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKGTGGVAGASLPKAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA
Ga0370541_058508_73_4563300034680SoilMITAVAALAGAAVVGVPGAFAATPQQIYRDYKDNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQQNKSSGGVAGASLPAAKKQGSLPFTGYDLGLMTAGGFAFLLLGGALRRFARNKA
Ga0370546_079052_23_4063300034681SoilMITAVAALAGAAVVGVPGAFAATPQQIYKDYQDNGRLDGHYSKADLSRALKDAVIQGYKKPTSNGIVPAIKTQVNKGTGGVAGASLPAAKKQGSLPFTGADLALMTVGGFSLLLLGGALRRFARNKA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.