Basic Information | |
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Family ID | F105681 |
Family Type | Metagenome |
Number of Sequences | 100 |
Average Sequence Length | 48 residues |
Representative Sequence | MADDKEPFEALTATAEQTPEQITKQTQGAMENYFGWLQKTMSALPWSNTN |
Number of Associated Samples | 81 |
Number of Associated Scaffolds | 100 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 89.00 % |
% of genes near scaffold ends (potentially truncated) | 91.00 % |
% of genes from short scaffolds (< 2000 bps) | 91.00 % |
Associated GOLD sequencing projects | 71 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.41 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (54.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.000 % of family members) |
Environment Ontology (ENVO) | Unclassified (50.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (55.000 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 53.85% β-sheet: 0.00% Coil/Unstructured: 46.15% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.41 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Sediment Sediment Watersheds Soil Vadose Zone Soil Tropical Forest Soil Agricultural Soil Soil Grasslands Soil Soil Forest Soil Soil Tropical Peatland Tropical Forest Soil Corn, Switchgrass And Miscanthus Rhizosphere |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
AF_2010_repII_A10DRAFT_10238323 | 3300000816 | Forest Soil | MTDKEPFESLTAAQTAEQMTKQTQGAMENYFGWLQMTMPTFPWANTNL |
Ga0066684_107641652 | 3300005179 | Soil | MTDKERFESLTATAAQSAEQMTKQTQVAMENYFGWFQNAMSAIPWSNTNLNRILL |
Ga0066671_107793221 | 3300005184 | Soil | MADKESFESLTTTARQTAEQFTKQAQGPMENYLGWLQTSMAALPWSNTNLNRILL |
Ga0070710_103776271 | 3300005437 | Corn, Switchgrass And Miscanthus Rhizosphere | MADDKEPFEASTATAEQTAEQITKQTQGAMENFFGWLQKTMSALPWSNTNLNRILLS |
Ga0070699_1014782811 | 3300005518 | Corn, Switchgrass And Miscanthus Rhizosphere | MAEDESFEALTATDEQTAEQITKQTQGAMENYFGWLQKTMSALPWSDTNLDRILLGYATQNV |
Ga0066903_1087067181 | 3300005764 | Tropical Forest Soil | MAEDKETFEALTATEKQTAEQIMKQTQGAMENYFGWLQKTMSALPWSDTNL |
Ga0066903_1088019382 | 3300005764 | Tropical Forest Soil | VAEDKEPFEALTATEEQTAEQITKQTQGAMENYFGWLQTTMSTL |
Ga0066903_1090297011 | 3300005764 | Tropical Forest Soil | MAKDKELFEGLTTAAQQTAKQITEQTQGAMEDYFGWLQTTMSAFPWSNTNLNRILLSHATQNV |
Ga0070717_107311012 | 3300006028 | Corn, Switchgrass And Miscanthus Rhizosphere | MAKDKEPLEAFTATAAQTAEQMTKQTQDYFGWLQNTMSTF |
Ga0075023_1001952671 | 3300006041 | Watersheds | MAKDQDPLEAFTVTAAQTAEQTTKQTQGAMENYFGWL |
Ga0075024_1005561792 | 3300006047 | Watersheds | MADKEPSLTGVARQTAEQITQQTTHAMETYFSWLPNVMSAFPWS |
Ga0075014_1001674982 | 3300006174 | Watersheds | MAEDKEPFEALRATAEQSAEQITKQTQGAMENYFGWLHRRRVLGE* |
Ga0079220_107303432 | 3300006806 | Agricultural Soil | MAQDEKPSEARKATGERTAQEIVKQAQGAMENYFGWLQKSMSTLPWSNTNLNR |
Ga0079219_108369172 | 3300006954 | Agricultural Soil | MAQDEKPSEARKATGERTAQEIVKQAQGAMENYFGWLQKSMSTLPWSNTNLNRVLLS |
Ga0066709_1042767951 | 3300009137 | Grasslands Soil | MAEDKEPFEALTATEEQTAEQITKQITKQTQGAMENYFDWLQKT |
Ga0126373_117905642 | 3300010048 | Tropical Forest Soil | VAEDKVPFEALTATEEQAIEQITKQTQGAMENYFGCLQKAMSALPWSNTNLNRVLL |
Ga0126370_116100122 | 3300010358 | Tropical Forest Soil | MAKDKGPFGGLTTTAAQTAEQMTKQTQGAMENYFGWLQTTTSALPWSNTNLNR |
Ga0126376_112202792 | 3300010359 | Tropical Forest Soil | MTDKEPFESLTAAQTAEQMTKQTQGAMENYFGSLQTTMSVFPWSNTNLNRILLT* |
Ga0126372_109735351 | 3300010360 | Tropical Forest Soil | MAKDKEPFEALTATEEQTAEQITRQTQGAMENYFGWLQKTMSAL |
Ga0126378_111498663 | 3300010361 | Tropical Forest Soil | MAADKEPFKALPPTEEQTAEQITKQTQGAMENYFDWLQKTRFLGVTRI* |
Ga0126378_112480371 | 3300010361 | Tropical Forest Soil | DKGPFEGLTATAAQTAEQMTKQTQGAMENYFGWLQTTMSAFPWSNTNLNRVR* |
Ga0126377_125050452 | 3300010362 | Tropical Forest Soil | MAKDKEPFESLTATAAQTAERMTKQTQGAMENYLGWLPTTMSALPWSNTNLNR |
Ga0126381_1018131533 | 3300010376 | Tropical Forest Soil | MAKDKEPFEALTASAAQTAEQITKQTQGAMENYFGWLQKTM |
Ga0126383_110043761 | 3300010398 | Tropical Forest Soil | MAKDKEPFESLTATAAQTAERMTKQTQGAMENYFG |
Ga0126383_114927663 | 3300010398 | Tropical Forest Soil | MTDKEPFESLTATAAKTAEQITKQTQGAMENYFGWLQM |
Ga0124850_11438602 | 3300010863 | Tropical Forest Soil | MAKDKEPVEILTAGAEQTAEQTTKQTQDYFGWLQQKTMSVPVTRI* |
Ga0137776_14306701 | 3300010937 | Sediment | MANDKDHPLEPFSFNATKTAEQMTKQTQGAMDNYFGWLQT |
Ga0137776_18889592 | 3300010937 | Sediment | MTKEDPLEPFSFNATKTAEQMTKQTQGAMDNYFGWLQT |
Ga0137388_106290191 | 3300012189 | Vadose Zone Soil | MADDKEPFEALTATAEQTPEQITKQTQGAMENYFGWLQKTMSALPWSNTN |
Ga0137365_112082371 | 3300012201 | Vadose Zone Soil | MPAMADKEPFESLTTTAAQSVDQITNQTQGAMENYFGWLQTTTSALPWSNTNLNRILLSN |
Ga0137360_116849261 | 3300012361 | Vadose Zone Soil | MAEDKEPFEALTATEEQTAEQITKQTQGAMENYFGWLQKTMSALPWSNTNLIEYF* |
Ga0126375_103432901 | 3300012948 | Tropical Forest Soil | MAKDRESIESLTATAAQTAELITKQTQGAMENYFG |
Ga0182036_112940501 | 3300016270 | Soil | MAKDKDPLEAFTVTAGQTAEQMMKQTQAAIENYFGWLQMTMSTFPWSNT |
Ga0182036_114892013 | 3300016270 | Soil | MAKDKDPLEAFTATAAQMTKQTQVAMENYFGWLQKA |
Ga0182041_111134701 | 3300016294 | Soil | MANDKEPFEALTATAEQTAEQITKQTQGAMEKYFRWLHNTMSAFPWSSTNLNRIL |
Ga0182041_114860021 | 3300016294 | Soil | MAKDKGPFEALTATATQTAEQITKQTQGAMESYFGWLQKAMSTYPWS |
Ga0182035_1000186816 | 3300016341 | Soil | MAKGQDPLEALTATAAQTAQQITKQTQGAMESYFGWLQ |
Ga0182035_101504211 | 3300016341 | Soil | MAKDKEPFEALAATAERTAEQITKQTQGAMEYYFGWLQNAMSALPWSNTNLNRV |
Ga0182035_109609313 | 3300016341 | Soil | MAKDKEPFEGLTTAAQQTAKQITEQTQGAMENYFGWLQTTMSAFPWS |
Ga0182035_110136473 | 3300016341 | Soil | MANDKEPFEALTATAEQTAEQITKQTQGAMEKYFRWLHNTMSAFPWSSTNLNRILLSNA |
Ga0182032_101337313 | 3300016357 | Soil | MAKDKEPLEAFTAAAAQMTKQTQGAMENYFGWLQMTMPTFPWSNTNLN |
Ga0182034_102901711 | 3300016371 | Soil | MAKDKGPFEDLTTTAAQTAEQMTKQTQGVMENYFGWLQTTTSALPWS |
Ga0182034_105011981 | 3300016371 | Soil | MAKDREPVEILTASAEQTAEQITRQTQDYFGWLQKTMSVPWSHTNLNR |
Ga0182034_117145151 | 3300016371 | Soil | MAKDKEPFEALAATAERTAEQITKQTQGPMEYYFGWLQNAMSALPWSNTNLNRVLLRNATQN |
Ga0182040_109788322 | 3300016387 | Soil | MAKDTEPLEAFTTSAAQTAEQLTKQTQGAMENYVAWLQTTMSVLPWS |
Ga0182037_117410682 | 3300016404 | Soil | MAKDKEPLQVFIATAAQTAEQMRTQTQGAMENYFGW |
Ga0182039_102627891 | 3300016422 | Soil | MRKDKESIESLTANAEQTAEQITKQTQDYFGWLQKTMSVPWSHTNLNRILLN |
Ga0182039_121743071 | 3300016422 | Soil | MAKDKEPFEGLTTAAQQTAKQITEQTQGAMENYFGWLQTTMSAFPWSNTNLNRILLSHATQN |
Ga0187802_101981442 | 3300017822 | Freshwater Sediment | MKSTAAVLEALTATAEQSAEQITKQTQGAMENYFGWLHRRRVLGE |
Ga0187820_10568913 | 3300017924 | Freshwater Sediment | MAEDKECFEALTATAEQTAEQITKQTQGAMENYFGWLQKTIS |
Ga0187801_102378442 | 3300017933 | Freshwater Sediment | MAEDKEPFEALTATEEQTAEQITKQTQGAMENYFGWLQKTMSALPWTNTNLDRILLSY |
Ga0187803_102406641 | 3300017934 | Freshwater Sediment | MAKDKEPFEALTGTAQETAKQITEQTQGAMENYFGWLQTTMSSTFF |
Ga0187817_105849421 | 3300017955 | Freshwater Sediment | LHHHTYEDTAMAEDQEPFEALTATAEQSAEQITKQTQRAMENYFGWLHRRRVLGE |
Ga0187779_103349473 | 3300017959 | Tropical Peatland | MAKDKEPFEGLTTSAQQTAKQITEQTQGAMENYFGGLQTTMSVFPWS |
Ga0187783_105767322 | 3300017970 | Tropical Peatland | MNLNENTAMTKDEEPLEAFVATAAQLRAQMQGAMENYFGWLQTTMST |
Ga0187823_101074381 | 3300017993 | Freshwater Sediment | MAEDKECFEALTATAEQTAEQITKQTQGAMENYFGWLQKTISALP |
Ga0210406_109629131 | 3300021168 | Soil | MAEDGPFEALRATEEQTAEQITKQTQGAMENYFGWLQKSMSALPWTNKNLDRILLGYAT |
Ga0210408_113324342 | 3300021178 | Soil | MAKDEEPFESVTVTAAQTAKQITEQTQEVMENYFGWLQKTMPALPWSNTNLNRILLNH |
Ga0209073_103643981 | 3300027765 | Agricultural Soil | MAEEKEPFEALTTTAAQTAEQITKQTQGAMENYFGWLQNTMSTLP |
Ga0209177_104627382 | 3300027775 | Agricultural Soil | MAKDKTPLEAFTATTALTAEQMTKQTQDAMENYFGWLQKAM |
Ga0209583_102317003 | 3300027910 | Watersheds | MAKDQDPLEAFTVTAAQTAEQTTKQTQGAMENYFGWLQKSMSTFPWSNTN |
Ga0209698_110580102 | 3300027911 | Watersheds | MAEDKEPFEALTATEEQTAEQITKQTKGAMENYFGWLQSCDVDDAKF |
Ga0170834_1125625763 | 3300031057 | Forest Soil | MAKDKEPLEAFTATAAQTAEQMTKQTQDYFGWLQNTMSTFPWSNTNLNRILLSNATKN |
Ga0170820_171424772 | 3300031446 | Forest Soil | MTEDKERFEALTATAEQTAEQITKQTQGAMENYFCWLQKTMSALPWRNTNLNRILLSNATQNV |
Ga0170819_162760501 | 3300031469 | Forest Soil | MADDKEPFEALTATAEQTAEQITKQTQGAMENYFGWL |
Ga0318534_102370342 | 3300031544 | Soil | MAEDKETFEALTATEKQTAEQIMKQTQGAMENYFGWPQK |
Ga0318538_100307815 | 3300031546 | Soil | MAEDKETFEALTATEKQTAEQIMKQTQGAMENYFGWLQKTMSALPWSDTNLHRILLNY |
Ga0318542_102886741 | 3300031668 | Soil | MAEDKETFEALTATEKQTAEQIMKQTQGAMENYFGWLQKTMSALPW |
Ga0318560_106636751 | 3300031682 | Soil | MAKDKEPFEALAATAERTAEQITKQTQGAMEYYFGWLQNAMSALPWSNTNLN |
Ga0310686_1125199851 | 3300031708 | Soil | MAKDKEPFEALTGMAELTAEQIMKQTQGAMENYFGWLQTTMSAFPWSN |
Ga0318500_100006271 | 3300031724 | Soil | MAKYEEPLKALTTSATQTTEQITKQTQGALENYFGWLQTTMSAVPWSNTNLNRILLSN |
Ga0306918_100594944 | 3300031744 | Soil | MAKYKEPFAALTATEEQTADQITKQTQRAMENYFGWLQKTMSATSLE |
Ga0306918_113076742 | 3300031744 | Soil | MAKYEEPLKALTTSATQTTEQITKQTQGALENYFGWLQT |
Ga0318502_104048661 | 3300031747 | Soil | MAKDKEPFEALAATAERTAEQITKQTQGAMEYYFGWLQNAMSALPWSNTNLNRVLLRNATQNVT |
Ga0318494_101434333 | 3300031751 | Soil | MAEDKETFEALTATEKQTAEQIMKQTQGAMENYFGWLQKTMSALPWSDTNLHRILLNCAT |
Ga0318537_100049641 | 3300031763 | Soil | MAKYEEPLKALTTSATQTTEQITKQTQGALENYFGWLQTTMSAVPWS |
Ga0318554_107904191 | 3300031765 | Soil | MAKDREPVEILTASAEQTAEQITKQTQDYFGWLQKTMSVP |
Ga0318546_111431631 | 3300031771 | Soil | MAKDKEPFEGLTTAAQQTAKQITEQTQGAMENYFGWLQTTMSAFPWSNTNLNRILLTHAT |
Ga0318543_100031181 | 3300031777 | Soil | MAKYEEPLKALTTSATQTTEQITKQTQGALENYFGWLQTTMSA |
Ga0318568_107641311 | 3300031819 | Soil | MAEDKETFEALTATEKQTAEQIMKQTQGAMENYFGWLQKTMSALPWSDTNLH |
Ga0310917_106043351 | 3300031833 | Soil | MAKDKDPLEAFTVTAGQTAVQMMKQTLAAMENYFGWLQMTMS |
Ga0310917_108117111 | 3300031833 | Soil | MAKYKEPFAALTATEEQTADQITKQTQRAMENYFGWLQK |
Ga0310917_110857882 | 3300031833 | Soil | MAKDKEPFEGLTTAAQQTAKQITEQTQGAMENYFGWLQTTMSAFPWSNTNLNRILL |
Ga0318527_103984611 | 3300031859 | Soil | DTAMAKDKEPFEALTAPEEQTAEEITKQTQGAMENYFGWLQKTMSHFHGVTRI |
Ga0306919_110817852 | 3300031879 | Soil | MANDKEPFEALTATAEQITKQTQGAMENYFRWLQNTMSAFPWSSTNLNRILL |
Ga0306925_101997245 | 3300031890 | Soil | MAKDKEPFEALTATEEQTAEQIMKQTQGAMENYFGWLQKTMSHFHGVTRI |
Ga0306923_122802161 | 3300031910 | Soil | MAKDKEPFEGLTTAAQQTAKQITEQTQVAMENYFG |
Ga0306921_106199142 | 3300031912 | Soil | MAKDKEPFEALTATEEQTAEQIMKQTQGAMENYFGWLQKTMSHF |
Ga0310910_113588102 | 3300031946 | Soil | MAKDKGPFEALTATATQTAEQITKQTQGAMENYFGWLQ |
Ga0306926_122448942 | 3300031954 | Soil | MAKDKGPFEALTATATQTAEQITKQTQGAMENYFGWLQKTMSTFPWSNTNLNRILLSNA |
Ga0318530_100013541 | 3300031959 | Soil | MPKYEEPLKALTTSATQTTEQITKQTQGALENYFGWLQTTMSAVPWSNTNLN |
Ga0306922_101194485 | 3300032001 | Soil | KYKEPFAALTATEEQTADQITKQTQRAMENYFGWLQKTMSATSLE |
Ga0306922_114991301 | 3300032001 | Soil | MANDKEPFEALTATAEQTAEQITKQTQGAMENYFRWLHNTMSAFPWSSTNLN |
Ga0310911_101267291 | 3300032035 | Soil | MRKDKESIESLTANAEQTAEQITKQTQDYFGWLQKTMSVPWS |
Ga0310911_108276302 | 3300032035 | Soil | MAKDKEPFEGLTTAAQQTAKQITEQTQGAMENYFGWLQTTMSA |
Ga0318532_102678611 | 3300032051 | Soil | MAKDKEPFEALAATAERTAEQITKQTQGAMEYYFGWLQNAMSALPWSNT |
Ga0318505_105651092 | 3300032060 | Soil | MAKYKEPFAALTATEEQTADQITKQTQRAMENYFGWLQKTMSA |
Ga0318504_105028971 | 3300032063 | Soil | MAKDQDPLEALTATAAQTAQQITKQTQGAMESYFGWLQKAMSTYPWSNTN |
Ga0306920_1017581861 | 3300032261 | Soil | MAKDKEPFEALAATAERTAEQITKQTQGAMEYYFGWLQNA |
Ga0306920_1030990602 | 3300032261 | Soil | MANDKEPFEALTATAEQITKQTQGAMENYFRWLQNTMSAFPWSSTNLNRI |
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