Basic Information | |
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Family ID | F105631 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 100 |
Average Sequence Length | 57 residues |
Representative Sequence | MTTNNARSAFLRSYHLPAILLHYPRLVRAMQGIAMLNGMEAAACIRDLKAGRR |
Number of Associated Samples | 76 |
Number of Associated Scaffolds | 100 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 100.00 % |
% of genes near scaffold ends (potentially truncated) | 1.00 % |
% of genes from short scaffolds (< 2000 bps) | 2.00 % |
Associated GOLD sequencing projects | 73 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (95.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.000 % of family members) |
Environment Ontology (ENVO) | Unclassified (41.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (54.000 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 88.68% β-sheet: 0.00% Coil/Unstructured: 11.32% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Sediment Vadose Zone Soil Tropical Forest Soil Grasslands Soil Soil Soil Hardwood Forest Soil Soil Tropical Forest Soil Forest Soil Soil Corn, Switchgrass And Miscanthus Rhizosphere Populus Rhizosphere |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
F14TC_1072339731 | 3300000559 | Soil | VTTSNARSAFLRSYHLPAILRQYPRLIRAMQRVANLGHMEAALCIRELKAGRRWSGFAVDRY |
JGI12627J18819_100667451 | 3300001867 | Forest Soil | MTTANARRAFVRSYHLPTILTHYPRLVRAMRGVVALNGVEAAICIRDLKAGRRWSSEAVNRYGGTH |
Ga0066388_1046923661 | 3300005332 | Tropical Forest Soil | MTTRSARCAFLRSYQILSILTHYPRLVRAMRGIALLSGTEAAICIRDLKAGRRWS |
Ga0070708_1003738223 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MTRKGARSAFLRSYHIPSILLHYPRLVRSMRRLAILDEMTAATCIRDLKAGRRWSSEAVNRYGGT |
Ga0070707_1002656242 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTKGARSAFLRSYHIPSILLHYPRLVRSMRRLAILDEMTAATCIRDVKAGRRWS |
Ga0070762_105835371 | 3300005602 | Soil | MTTNNARSAFLRSYHLPAILLHYPRLVRAMQGIAMLNGMEAAACIRDLKAGRRWGTEAVN |
Ga0070762_106612291 | 3300005602 | Soil | MTTNDARAAFLRTYHIPAILVHYPRLVRAMQWVAGLNRAEAAACIRDLKAGH |
Ga0066903_1040877641 | 3300005764 | Tropical Forest Soil | SARCAFLRSYQILTVLTHDPRLVRSMRGIAMLSGTEAAICIRDFKAGRRWSIEAEGKAT* |
Ga0070712_1007856711 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTNNARGAFLRSYHLPAILLHYPRLVRAMQGIAMLNGMEAAACIRDLKAGR |
Ga0075436_1008432781 | 3300006914 | Populus Rhizosphere | MTTKGARSAFLRSYHIPSILLHYPRLVRSMRRVAILDEMAAATCIRDLKARRRW |
Ga0099791_100310644 | 3300007255 | Vadose Zone Soil | MTTNNARRAFLRSYYLPAILLHYPRLVRAMQGIAMLNGIEAAACIRDLKAGRRWSSEAVNRYGGTHKGCD* |
Ga0099793_102367762 | 3300007258 | Vadose Zone Soil | MTTNNARRAFLRSYYLPAILLHYPRLVRAMQGIAMLNGIEAAACIRDLKAGRRWSK* |
Ga0099794_105299561 | 3300007265 | Vadose Zone Soil | NNARRAFLRSYYLPAILLHYPRLVRAMQGIAMLDGIEAAACIRDLKAGRRWSK* |
Ga0126376_107422802 | 3300010359 | Tropical Forest Soil | MTTHSARCAFLRSYQILTILTHYPRLVRSMRGIAMLSGSEAAICIRD |
Ga0126378_120548351 | 3300010361 | Tropical Forest Soil | MTTKHARRAFLRSYHVPAILINYPRLVRAMQSVAMLSGIEAASCIRDLK |
Ga0126379_109966011 | 3300010366 | Tropical Forest Soil | MTTRSARCAFLRSYQILSILTHYPRLVRAMRGIALLSGTEAAICIRDLKAGRR |
Ga0126381_1006580731 | 3300010376 | Tropical Forest Soil | MTTRSARCAFLRSYQILSILTHYPRLVRAMRGIALLSGTEAAICIRDLK |
Ga0126381_1008337393 | 3300010376 | Tropical Forest Soil | MTTRSARCAFLRSYQVLSILTHYPRLVRAMRGIALLSGT |
Ga0126381_1024759791 | 3300010376 | Tropical Forest Soil | MTTESARCAFLRSYQILTVLTHDPRLVRSMRGIAMLSGTEAAICIRDFKAGRRWSIEAKGKAT* |
Ga0137391_100578834 | 3300011270 | Vadose Zone Soil | MTTNNARRAFLRSYYLPAILLHYPRLVRAMRGIAMLNGIEAAACIRDLKAGRRWSSEAVNRYGGTHKGCD* |
Ga0137363_103168192 | 3300012202 | Vadose Zone Soil | MTTNNARGAFLRSYHLPAILLHYPRLVRAMQGIAMLNGMEAAACIRDLKAGRRWSSE |
Ga0137363_108176302 | 3300012202 | Vadose Zone Soil | MTTNNARRAFLRSYYLAILLHYPRLVRAMQGIAMMNGIEAAACIRDLKAGRRWSSEAVNRYGGTHKGCD* |
Ga0137362_101831033 | 3300012205 | Vadose Zone Soil | MTTNNARRAFLRSYYLAILLHYPRLVRAMQGIAMLNGIEAAACIRDLKAGRRSSSEALNRYGGTHKGCD* |
Ga0137362_102026631 | 3300012205 | Vadose Zone Soil | MTASNARSAFLRSYHLPAILLHYPRLVRAMQGIAMLNGMEAAACIRDLKAGRRWSSEA |
Ga0137360_100431935 | 3300012361 | Vadose Zone Soil | MTTNNARRAFLRSYYLAILLHYPRLVRAMQGIAMLNGIEAAACIRDLKAGRRWSSEAVNRYGGTHKGCD* |
Ga0137360_102677442 | 3300012361 | Vadose Zone Soil | MTTNNARSAFLRSYHLPAILLHYPRLVRAMQGIAMLNGMEAAACIRDLK |
Ga0137361_100030414 | 3300012362 | Vadose Zone Soil | MTTNNARRAFLRSYYLPAILLHYPRLVRAMQGIAMLNGIEAAACIRDLKAGRRSSSEALNRYGGTHKGCD* |
Ga0137390_102165972 | 3300012363 | Vadose Zone Soil | MTTNNARRAFLRSYYLPAILLHYPRLVRAMQGIAMLDGIEAAACIRDLKAGRRWSSEAVNRYGGTHKGCD* |
Ga0137358_100461926 | 3300012582 | Vadose Zone Soil | MTTNNARRAFLRSYYLAILLHYPRLVRAMQGIAMLNGIEAAACIRDLKAGRRWSK* |
Ga0137358_111141482 | 3300012582 | Vadose Zone Soil | MTTNNVRSAFLRSYHLPAILLHYPRLVRAMQGIAMLNGMEAAACIRDLKAGRRWSGE |
Ga0137407_122469272 | 3300012930 | Vadose Zone Soil | MTTRGARGAFLRSYHIPSILLHYPRLVRSMRRLAILDEMTAATCIRDLKAGRRWSS |
Ga0182036_113172382 | 3300016270 | Soil | MTTRSARCAFLRSYQVLSILTHYPRLVRAMRGIALLSGTEAAICI |
Ga0182041_100196358 | 3300016294 | Soil | MTTRSARCAFLRSYQVLSILTHYPRLVRAMRGIALLSGTEAAICIRD |
Ga0182041_107263832 | 3300016294 | Soil | MTTRTARCAFLRSYQVLSILTHYPRLVRAMRGIALLSGTEAAICIRD |
Ga0182035_100487717 | 3300016341 | Soil | MTTRSARCAFLRSYQILSILTHYPRLVRAMRGIALLSGTEAAI |
Ga0182035_118479332 | 3300016341 | Soil | MTTRSARCAFLRSYQVLSILTHYPRLVRAMRGIALLSGTE |
Ga0182037_117607712 | 3300016404 | Soil | MTTRTARCAFLRSYQVLSILTHYPRLVRAMRGIALLSGTEAAICIRDLKAGRRWSVEAVN |
Ga0187804_100811341 | 3300018006 | Freshwater Sediment | MTTNGARSAFLRSYHIPAILLHYPRLVRAMREIATLNSVEAAACIRDFKAGRRWSGQ |
Ga0179592_101338002 | 3300020199 | Vadose Zone Soil | MTTNNARSAFLRSYHLPAILLHYPRLVRAMQGIAMLNGMEAAACIRDLKAGRRWSGEAVNRY |
Ga0210407_103712163 | 3300020579 | Soil | MTRKGARSAFLRSYHIPSILLHYPRLVRSMRRLAILDEITAATCIRDLKAGRRWSSGPVNRYGG |
Ga0210407_107491471 | 3300020579 | Soil | MTTKGARSAFLRSYHIPSILLHYPRLVRSMRRVAILDEMAAATCIRDL |
Ga0210407_112653521 | 3300020579 | Soil | MTRKGARNAFLRSYHIPSILLHYPRLVRSMRRVAILDEMAAATCIRDLKARRRWSS |
Ga0210399_100697081 | 3300020581 | Soil | MTRKGARNAFLRSYHIPSILLHYPRLVRSMRRLAVLDEMTAATCIRDL |
Ga0210401_108192332 | 3300020583 | Soil | MTTKGARSAFLRSYHIPSILLHYPRLVRSMRRVAILDEMAAATCIRDLKARRRWSGDAVDRCGGTH |
Ga0210401_109581672 | 3300020583 | Soil | MTTKGARSAFLRSYHIPSILLHYPRLVRSMRRVAILDEMAAATCIRDLKARRG |
Ga0210404_107088802 | 3300021088 | Soil | MTTNNARCAFLRSYHVPSILLHYPRLVRAMRGIAGLNGMEAAKCIRDFKAGRRWSSEAVN |
Ga0210406_101493211 | 3300021168 | Soil | MTTKGARSAFLRSYHIPSILLHYPRLVRSMRRLATVDEMTAATCIRDLKAGR |
Ga0210406_102478003 | 3300021168 | Soil | MTRKGARNAFLRSYHMPSILLHYPRLVRSMRRLAILDEMTAAPCIRD |
Ga0210400_1000038248 | 3300021170 | Soil | MTRKGARNAFLRSYHIPSILLHYPRLVRSMRRVAILDEMAAATCIRDLKARRHWSSDAVDRCG |
Ga0210400_101794122 | 3300021170 | Soil | MTTKGARSAFLRSYHIPSILLHYPRLLRSMRRVAILDEMAAATCIRDLKARRRWSSDAVDRFG |
Ga0210400_107487962 | 3300021170 | Soil | MTTNSARSAFLRSYHLPAILVYYPRLVRAMQGIAMLSGIEAAACIRDFKAGQRW |
Ga0210400_116154192 | 3300021170 | Soil | MTRKGARNAFLRSYHIPSILLHYPHLVRSMRRLAILDEMTAATCIRDLKAGRRWSSEAVNRYGGTHKVAT |
Ga0210405_103195251 | 3300021171 | Soil | MTTKGARSAFLRSYHIPSILLRYPRLVHSMRRLAVLDEMTAATCIRDLKAGRRWSSEAVNRY |
Ga0210405_103340791 | 3300021171 | Soil | MTTKGARSAFLRSYHIPSILLHYPRLVRSMRRVAILDELAAATCIRDLKARRRWSSDAVDRYGGTR |
Ga0210388_107849001 | 3300021181 | Soil | MTRKGARNAFLRSYHIPSILLHYPRLVRSMRRVAILDEMAAATCIRDLKARRCWSSD |
Ga0210387_106751201 | 3300021405 | Soil | MTTKGARSAFLRSYHIPSILLHYPRLVRSMRRLAILDEMTAAACIRDLTARRRWSS |
Ga0210387_112588892 | 3300021405 | Soil | MTTKGARSAFLRSYHIPSILLHYPRLVRSMRRVAILDEMAAATCIRDLKA |
Ga0210387_113185831 | 3300021405 | Soil | MTTNNAHCAFLRSYHLPAILLHYPRLVRAMQRIAMLNGTEAAACIRDLKAGRRWSSGPVN |
Ga0210383_107844051 | 3300021407 | Soil | MTTRGARSAFLRSYHVPSILLHYPRLVRSMRRLAILDEMTAATCIRDLKAG |
Ga0210383_110321812 | 3300021407 | Soil | MTRKGARSAFLRSYHIPSILLHYPRLVRSMRRLAILDEITAATCIRDLKAGR |
Ga0210394_113832951 | 3300021420 | Soil | MTTKGARSAFLRSYHIPSILLHYPRLVRSMRRLAILDEMTAATCIRDL |
Ga0210391_113096521 | 3300021433 | Soil | MTTKGARSAFLRSYHIPSILLHYPRLVRSMRRVAILDEMAAATCIRDLKARRRWSS |
Ga0210410_104585451 | 3300021479 | Soil | MTGNNARSAFLRSYHIPAILLHYPRLVRAMRGIASLNGMEAAACI |
Ga0210409_103180301 | 3300021559 | Soil | MTRKGARNAFLRSYHIPSILLHYPRLVRSMMRLAILDEMTAVTCIRDLKAGRR |
Ga0210409_107642572 | 3300021559 | Soil | MTTKGARSAFLRSYHIPSILLHYPRLVRSMRRVAILDEMAAATCIRDLKARRRWSSDAVDRYGGTHK |
Ga0207684_107432701 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MTTKGARSAFLRSYHIPSILLHYPRLVRSMRRLAILDEMTATTCIRDLKAGR |
Ga0207693_101018984 | 3300025915 | Corn, Switchgrass And Miscanthus Rhizosphere | MTRKGARNAFLRSYHIPSILLHYPRLVRSMRRLAVLDEMTAATCIRDLKAGRRWSSRQSLRRNS |
Ga0207665_100741021 | 3300025939 | Corn, Switchgrass And Miscanthus Rhizosphere | MTRKGARNAFLRSYHIPSILLHYPRLVRSMRRLAVLDEMTAATCIRDLKA |
Ga0209240_10049747 | 3300026304 | Grasslands Soil | MTTNNARRAFLRSYYLPAILLHYPRLVRAMQGIAMLNGIEAAACIRDLKAGRRWSSEAVNRYGGTHKGCD |
Ga0257179_10369811 | 3300026371 | Soil | MTASNARSAFLRSYHLPAILLHYPRLVRAMQGIAMLNGMEAAACIRDLKAGRRWSSEAVNRYGG |
Ga0209730_10321991 | 3300027034 | Forest Soil | MTTNNARVAFLRSYDVPAILLHYPRLVRAMRGIAMLNGIEAAACIRDLKAGRRW |
Ga0208092_1118081 | 3300027074 | Forest Soil | MTTNNARSAFLRSYHLPAILLHYPRLVRAMQGIAMLNGMEAAACIRDLKAGRR |
Ga0209731_10467431 | 3300027326 | Forest Soil | MTTNNARVAFLRYDVPAILLHYPRLVRAMRGIAMLNGIEAAACIRDLKAGRR |
Ga0209523_10132791 | 3300027548 | Forest Soil | MTTNNARVAFLRSYDVPAILLHYPRLVRAMRGIAMLNGIEAAACIRDLKAGRRWSSE |
Ga0137415_101208272 | 3300028536 | Vadose Zone Soil | MTTNNARRAFLRSYHLPAILLHYPRLVRAMQGIAMLNGIQAAACIRDLKAGRRWSSEAVNRYGGTHKGCD |
Ga0222749_106882371 | 3300029636 | Soil | MTTKGARSAFLRSYHIPSILLHYPRLVRSMRRLAILDEMTAATCIRDLKAGRRW |
Ga0318561_106791071 | 3300031679 | Soil | MTTHSARCAFLRSYQILTILTHYPRLVRSMRGIAMLSGSEAAICIRDLKAGRRWSVEAVNQYGGTR |
Ga0307469_105343591 | 3300031720 | Hardwood Forest Soil | MATKSARSAFLRCYHIPSILLHYPRLVRSMRRVAILDEMTAATCIRDLKARR |
Ga0307469_115813771 | 3300031720 | Hardwood Forest Soil | MTTNNARGAFLRSYHLPAILLHYPRLVRAMQGIAMLNGMEAAACIRDLKA |
Ga0307468_1022739972 | 3300031740 | Hardwood Forest Soil | MTRKGARSAFLRCYHIPSILLHYPRLVRSMRRLAILDERTAATCIRDLKAGRRWSSEAVNRYGGTH |
Ga0307477_111207761 | 3300031753 | Hardwood Forest Soil | MTTKGVRSAFLRSYHIPSILLHYPRLVRSMRRLAILDEVTAASCIRDLKAGRRWSSEAVNRYGGTHK |
Ga0307475_105095121 | 3300031754 | Hardwood Forest Soil | MTTKGARSAFLRSYHIPSILLHYPRLVRSMRRVAILDEMAAATCIRDLKARRRWSSDAVD |
Ga0318546_110251062 | 3300031771 | Soil | MTTRTARCAFLRSYQVLSILTHYPRLVRAMRGIALLSGTEAAICIRDLKAG |
Ga0318548_105629892 | 3300031793 | Soil | MTTRTARCAFLRSYQVLSILTHYPRLVRAMRGIALLSGTEAAICIRDLKAGRRWSVEA |
Ga0318568_108408902 | 3300031819 | Soil | MTTRSARCAFLRSYQVLSILTHYPRLVRAMQGIALLSGTEAAICIRDLKAGRRWSIEAVN |
Ga0307473_115592581 | 3300031820 | Hardwood Forest Soil | MTTNNARSAFLRSYHLPAILLHYPRLVRAMQGIAMLNGMEAAACISDLKAGRRWGT |
Ga0318567_105778431 | 3300031821 | Soil | MTTRSARCAFLRSYQILSILTHYPRLVRAMRGIALLSGTEAAICIRDLKAGRRWSVE |
Ga0318511_104665982 | 3300031845 | Soil | MTTRSARCAFLRSYQVLSILTHYPRLVRAMRGIALLSGTEAAICIRDLKAGRR |
Ga0306923_123199452 | 3300031910 | Soil | MTTRTARCAFLRSYQVLSILTHYPRLVRAMRGIALLSGTEAAICIRDLKAGRRWSVEAVNEYG |
Ga0310912_100037331 | 3300031941 | Soil | MTTRSARCAFLRSYQVLSILTHYPRLVRAMRGIALLSGTEAAICIRDLKAGRRWS |
Ga0310910_113855212 | 3300031946 | Soil | MTTRSARCAFLRSYQVLSILTHYPRLVRAMRGIALLSGTEAAICIRDLKAG |
Ga0310909_105105981 | 3300031947 | Soil | MTTRSARCAFLRSYQVLSILTHYPRLVRAMRGIALLSGTEAAICIRDLKAGRRWSVEAVNEYGGTRK |
Ga0306926_114740221 | 3300031954 | Soil | MTTNGARCAFLRSYQILSILTHYPRLVRAMQGIALLSGTEAAVCIRDFK |
Ga0307479_101898693 | 3300031962 | Hardwood Forest Soil | MTTNNARSAFLRSYHVLAILLHYPRLVRAMRGIAGLNGMEAAKCIRDSKAGRRWS |
Ga0318506_105011501 | 3300032052 | Soil | MTTHSARCAFLRSYQILTILTHYPRLVRSMRGIAMLSGSEAAICIRDLK |
Ga0307471_1015434191 | 3300032180 | Hardwood Forest Soil | MTTNNARSAFLRSYYLPAILLHYPRLVRAMQGIAMLNGMEAATCIRDLKAGRRWSSEAVNRYGGTHKVA |
Ga0307471_1020629662 | 3300032180 | Hardwood Forest Soil | MTTNNARSAFLRSYHVPAILLHYPRLVRAMRGIAGLNGMEAAKCIRDLKAGRRWSSDAVNRY |
Ga0307472_1000609421 | 3300032205 | Hardwood Forest Soil | MTRKGARNAFQRSYHIPSILLHYPHLVRSMRRLAILDEMTAATCIRDLKAGRRWSSEAVNRY |
Ga0307472_1008391341 | 3300032205 | Hardwood Forest Soil | MTTKGARSAFLRSYHIPSILLHYPRLVRSMRRVAILDEMAAATCIRDLKARRRWSSDAVDRY |
Ga0306920_1022884651 | 3300032261 | Soil | MTTNGARCAFLRSYQILSILTHYPRLVRAMQGIALLSGTEAAVCIRDFKAGRRWSVKA |
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