NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F105607

Metagenome / Metatranscriptome Family F105607

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105607
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 47 residues
Representative Sequence MSKRKPARTIKARSASKIRSKAAGSGQPKGRANSKQARVLALLCGPS
Number of Associated Samples 82
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 99.00 %
% of genes near scaffold ends (potentially truncated) 96.00 %
% of genes from short scaffolds (< 2000 bps) 95.00 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (52.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(47.000 % of family members)
Environment Ontology (ENVO) Unclassified
(69.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(47.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 48.94%    β-sheet: 0.00%    Coil/Unstructured: 51.06%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00239Resolvase 1.00
PF07045DUF1330 1.00
PF04909Amidohydro_2 1.00
PF01068DNA_ligase_A_M 1.00
PF11994DUF3489 1.00
PF04430DUF498 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG1423ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) familyReplication, recombination and repair [L] 1.00
COG1504Uncharacterized conserved protein, DUF498 domainFunction unknown [S] 1.00
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 1.00
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 1.00
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 1.00
COG3737Uncharacterized protein, contains Mth938-like domainFunction unknown [S] 1.00
COG5470Uncharacterized conserved protein, DUF1330 familyFunction unknown [S] 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A52.00 %
All OrganismsrootAll Organisms48.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2166559005|cont_contig111412All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium537Open in IMG/M
3300004114|Ga0062593_102539971All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium581Open in IMG/M
3300005363|Ga0008090_15665152Not Available565Open in IMG/M
3300005557|Ga0066704_10588806All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium718Open in IMG/M
3300005598|Ga0066706_10505475All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium962Open in IMG/M
3300005713|Ga0066905_101402881Not Available632Open in IMG/M
3300006175|Ga0070712_101934352All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium516Open in IMG/M
3300006574|Ga0074056_11757511All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium524Open in IMG/M
3300006796|Ga0066665_10843149All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium717Open in IMG/M
3300006796|Ga0066665_10937383Not Available668Open in IMG/M
3300010048|Ga0126373_10354074Not Available1481Open in IMG/M
3300010301|Ga0134070_10166053All Organisms → cellular organisms → Bacteria → Proteobacteria797Open in IMG/M
3300010863|Ga0124850_1000668All Organisms → cellular organisms → Bacteria → Proteobacteria8131Open in IMG/M
3300012200|Ga0137382_11296256All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium514Open in IMG/M
3300012202|Ga0137363_11820273Not Available502Open in IMG/M
3300012915|Ga0157302_10420021All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium557Open in IMG/M
3300012977|Ga0134087_10181041All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales934Open in IMG/M
3300013297|Ga0157378_11032070All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria857Open in IMG/M
3300015077|Ga0173483_10169591All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium980Open in IMG/M
3300015357|Ga0134072_10111677All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300016270|Ga0182036_11189832Not Available633Open in IMG/M
3300016319|Ga0182033_10395770Not Available1166Open in IMG/M
3300016341|Ga0182035_11808073Not Available553Open in IMG/M
3300016371|Ga0182034_11271169Not Available641Open in IMG/M
3300016371|Ga0182034_11868718Not Available530Open in IMG/M
3300016387|Ga0182040_10149638Not Available1662Open in IMG/M
3300016387|Ga0182040_11270012Not Available621Open in IMG/M
3300016404|Ga0182037_10557469All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300016404|Ga0182037_11480311Not Available602Open in IMG/M
3300016404|Ga0182037_11575729All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300018433|Ga0066667_11263773All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium644Open in IMG/M
3300021439|Ga0213879_10007905Not Available2210Open in IMG/M
3300021444|Ga0213878_10335032All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus lacunae652Open in IMG/M
3300021475|Ga0210392_10451027Not Available943Open in IMG/M
3300025910|Ga0207684_10127909Not Available2180Open in IMG/M
3300026326|Ga0209801_1219957Not Available744Open in IMG/M
3300026328|Ga0209802_1278933All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium558Open in IMG/M
3300026329|Ga0209375_1227473Not Available655Open in IMG/M
3300026343|Ga0209159_1144609All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium947Open in IMG/M
3300028782|Ga0307306_10141774All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium664Open in IMG/M
3300028807|Ga0307305_10384529All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium635Open in IMG/M
3300031544|Ga0318534_10316970All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium898Open in IMG/M
3300031545|Ga0318541_10309703All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium880Open in IMG/M
3300031546|Ga0318538_10702417All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium548Open in IMG/M
3300031561|Ga0318528_10793405Not Available506Open in IMG/M
3300031564|Ga0318573_10071058Not Available1740Open in IMG/M
3300031572|Ga0318515_10382783All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300031573|Ga0310915_10641518Not Available751Open in IMG/M
3300031573|Ga0310915_11279519Not Available505Open in IMG/M
3300031640|Ga0318555_10522225Not Available643Open in IMG/M
3300031679|Ga0318561_10705853Not Available555Open in IMG/M
3300031680|Ga0318574_10512974All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300031744|Ga0306918_11072378Not Available624Open in IMG/M
3300031744|Ga0306918_11420692Not Available531Open in IMG/M
3300031744|Ga0306918_11503770Not Available514Open in IMG/M
3300031748|Ga0318492_10494570Not Available648Open in IMG/M
3300031770|Ga0318521_10267024Not Available1002Open in IMG/M
3300031777|Ga0318543_10357923All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium653Open in IMG/M
3300031777|Ga0318543_10392996Not Available621Open in IMG/M
3300031777|Ga0318543_10468884Not Available564Open in IMG/M
3300031779|Ga0318566_10195005Not Available1005Open in IMG/M
3300031779|Ga0318566_10545325Not Available566Open in IMG/M
3300031793|Ga0318548_10519339Not Available581Open in IMG/M
3300031794|Ga0318503_10318325All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium505Open in IMG/M
3300031795|Ga0318557_10469260All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium578Open in IMG/M
3300031797|Ga0318550_10632684All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium513Open in IMG/M
3300031805|Ga0318497_10484485Not Available693Open in IMG/M
3300031832|Ga0318499_10228219Not Available724Open in IMG/M
3300031832|Ga0318499_10392446All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium531Open in IMG/M
3300031833|Ga0310917_10997120Not Available561Open in IMG/M
3300031860|Ga0318495_10370190Not Available633Open in IMG/M
3300031879|Ga0306919_10413539All Organisms → cellular organisms → Bacteria1035Open in IMG/M
3300031880|Ga0318544_10390931Not Available541Open in IMG/M
3300031890|Ga0306925_11090898Not Available807Open in IMG/M
3300031890|Ga0306925_11516722All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300031893|Ga0318536_10460408Not Available640Open in IMG/M
3300031897|Ga0318520_10707656All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium629Open in IMG/M
3300031910|Ga0306923_11211170All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium806Open in IMG/M
3300031910|Ga0306923_11645643All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300031912|Ga0306921_12272613Not Available569Open in IMG/M
3300031941|Ga0310912_10758789All Organisms → cellular organisms → Bacteria → Proteobacteria750Open in IMG/M
3300031945|Ga0310913_10074083Not Available2261Open in IMG/M
3300031946|Ga0310910_10545019Not Available920Open in IMG/M
3300031946|Ga0310910_11513300Not Available514Open in IMG/M
3300031947|Ga0310909_11223677Not Available606Open in IMG/M
3300031954|Ga0306926_12666818Not Available543Open in IMG/M
3300031959|Ga0318530_10370369All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium593Open in IMG/M
3300031981|Ga0318531_10376176All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium642Open in IMG/M
3300031981|Ga0318531_10480794Not Available562Open in IMG/M
3300032010|Ga0318569_10184214Not Available966Open in IMG/M
3300032035|Ga0310911_10059238All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2016Open in IMG/M
3300032041|Ga0318549_10401642All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium617Open in IMG/M
3300032043|Ga0318556_10471797All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium656Open in IMG/M
3300032059|Ga0318533_11066640Not Available592Open in IMG/M
3300032064|Ga0318510_10188509Not Available829Open in IMG/M
3300032067|Ga0318524_10637971Not Available561Open in IMG/M
3300032094|Ga0318540_10161110All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1076Open in IMG/M
3300032261|Ga0306920_101802804All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860863Open in IMG/M
3300032261|Ga0306920_102159070All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus lacunae775Open in IMG/M
3300032261|Ga0306920_102584524All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium696Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil47.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil23.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.00%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil2.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
SimulatedEngineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated1.00%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2166559005Simulated microbial communities from Lyon, FranceEngineeredOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006574Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010863Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300021439Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03EnvironmentalOpen in IMG/M
3300021444Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02EnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300028782Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031794Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23EnvironmentalOpen in IMG/M
3300031795Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031832Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031860Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031959Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
cont_0411.000064902166559005SimulatedMSKRKPARTIKARSASKIRSKAAGSGQPKGRANSKQARVLALLCGPSGATIATV
Ga0062593_10253997123300004114SoilMSKRKPARTIKARSASKIRSKAAGSGQPTGRANSKQARVLALLCGPNGATIATVTR
Ga0008090_1566515213300005363Tropical Rainforest SoilMSKRKPARTIEARSASKIRSTAAGSGQPTGRANSKQAWVLALL
Ga0066704_1058880613300005557SoilMSKRKPARAAKAQSSSKARSKAVGEGQHKRRTNSKQARVLALLG
Ga0066706_1050547513300005598SoilMSKRKPARTIKARSASKIRSKAAGSGQPTGRANSKQAWVLALLCGPSGASIATVT
Ga0066905_10140288123300005713Tropical Forest SoilMSKRKSARTIKARSASKIRKAAGSGQPKGRADSKQARVLALLCGP
Ga0070712_10193435223300006175Corn, Switchgrass And Miscanthus RhizosphereMSKRKPARTIKARSASKIRSKAAGSGQSKGRANSKQ
Ga0074056_1175751113300006574SoilMSKRKPARTIKARSASKIRSKAAGSGQPTGRENSKQAWVLALLCGPSGA
Ga0066665_1084314913300006796SoilMSKRKPARTIKARSASKIRSKAAGSGQPKGRANSKQA
Ga0066665_1093738313300006796SoilEEFCMSKRKPARTIKARSASKIRSKAAGSGQPKGRANSKQARVLALLCGPSGATIATAPSRPGT*
Ga0126373_1035407413300010048Tropical Forest SoilMSKRKPARTIKARSASKIGSKAAGSGQPKGRANSKQARVLALLCGPSGATIATVT
Ga0134070_1016605313300010301Grasslands SoilMSKRKPARTIKARSASKIRSKAAGSGQPKGRANSKQARVLALLCGPSGATIATAPSRPGT
Ga0124850_1000668133300010863Tropical Forest SoilMSKRKPARTIKARSASKIRSKAAGGGQPKGQVNSKQARVLALL*
Ga0137382_1129625613300012200Vadose Zone SoilMSKRKPARSAKAQSSSKARSKAVGEGQHKRRANSKQARGLALLGR
Ga0137363_1182027313300012202Vadose Zone SoilMSKRKPARTIKARSASQIRSKAAGSGQPKGRANSKQARVLALLCGPSGATIATVTRS
Ga0157302_1042002113300012915SoilMSRRKPARTIKARSASKIRSKAAGSGQSKGRANSKQARVLA
Ga0134087_1018104113300012977Grasslands SoilMSKRKPARTIKARSACKIRSKAAGSGQPKGRANSKQARMLALLCGPS
Ga0157378_1103207013300013297Miscanthus RhizosphereMSKRKPARTIKARSASKTGSKAACSGQYKGRANSKQARMLALLCGPNGATSATVTCSTG
Ga0173483_1016959123300015077SoilMSKRKPARTIKARSASKIRSKAAGSGQPTGRANSKQAWVLALLCGPSGATIATAPSRPGT
Ga0134072_1011167723300015357Grasslands SoilMSKRKPARTIKALSASKIRSKAAGSGQPKERANSKQA*
Ga0182036_1118983213300016270SoilMSKRKPARIIEARTASKIRSKVAGSRQPTGQANSKQAWVLALLCGPNGATI
Ga0182033_1039577043300016319SoilMSKRKPARTIKARPASKLRPKAAGSDQPKGRANSKQAWVLALLCG
Ga0182035_1180807313300016341SoilMSKRKPARTIKARSASEIRSKAAGSGQPKERANSKQAWVLALLCGPSGATI
Ga0182034_1127116913300016371SoilMSKRKPARTIKARSASKIGSKAAASGQPTGRANSKQARVLALLCGPSGATIATVTR
Ga0182034_1186871823300016371SoilMSKRKPARTIEARSASKIRSKAAGSGQPKGRANSKQARVLALLCGPSG
Ga0182040_1014963833300016387SoilMSKRKPARIIEARTASKIRSKVAGSRQPTGQANSKQAWVLALLCGPNGATIA
Ga0182040_1127001213300016387SoilMSKRKPARTIEARSASKIRSKAAGSGQPKGRANSKQARVL
Ga0182037_1055746913300016404SoilMSKRKPARTIKVRSASTIRSKAAGSGQPTGRANSKQARVLALLCGPSGA
Ga0182037_1148031113300016404SoilMSKRKPARIIEARTASKIRSKVAGSRQPTGQANSKQAWVLALLC
Ga0182037_1157572923300016404SoilMSKRKPARTIKARSASKIRSKAAVSGQPTGRANSKQAWVLALLC
Ga0066667_1126377323300018433Grasslands SoilMSKRKPARTIKARSASGICPKAAGSGQPTGQPNSKQAWVLALLCGPSGATIA
Ga0213879_1000790513300021439Bulk SoilMSKRKAARAIKARSASKIRSKPAGSGQLDERANSKQAWVLALLCGPSGATIA
Ga0213878_1033503213300021444Bulk SoilMSKRKAARTIKARSASKIPSKSAGSGQPTGQASSKQAWVLALLCGP
Ga0210392_1045102713300021475SoilMSKRKPARTIEARSASKIRSQAAGSGQPTGRVDSKQAWVLALLCGPNGATIATVTRRSFPSIMA
Ga0207684_1012790913300025910Corn, Switchgrass And Miscanthus RhizosphereMSKRKPARTIKVRSASKIRSKAAGSGQPKGRANSKQARVLALLCGPSGATIATVTR
Ga0209801_121995723300026326SoilMSKRKPARTIKALSASKIRSKAAGSGQPPGRANSKQAWVLALLCGPSGATIATVT
Ga0209802_127893313300026328SoilMSKRKPARTIKARSASKIRSKAAGSGQPKGRANSKQAWVLALLC
Ga0209375_122747323300026329SoilMSKRKPARTIKALSASKIRSKAAGSGQPPGRANSKQAWVLALLC
Ga0209159_114460923300026343SoilMSKRKPARTIKARSASKIRSKAAGSGQPKGRANSKQARVLALLCGPSGAT
Ga0307306_1014177413300028782SoilMSKRKPARTIKARSASKIRSKAAGSGQPKGRANSKQ
Ga0307305_1038452913300028807SoilMSKRKPARTIKARSASKIRSKAAGSGQPKGRANSKQARVLALLCGPSGATIATVTRS
Ga0318534_1031697023300031544SoilMSKRKPARTIKARPASKIRPKAAGSDQPKGRANSKQARVLALLC
Ga0318541_1030970313300031545SoilMSKRKPARTIKARSASKIRSKAAGSGQPKGRANSK
Ga0318538_1070241713300031546SoilMSKRKPARTIKARPASKIRPKAAGSDQPKGRANSKQAWVLALLCGPSGATIA
Ga0318528_1079340523300031561SoilMSKRKPARTIEARSASKIRSKAAGSGQPKGRANSKQARVLALL
Ga0318573_1007105813300031564SoilMSKRKPARTIKARPASRIRSKAAGSGQPTGRANSKQARVLALL
Ga0318515_1038278323300031572SoilMSKRKPARTIKARSASKIRSKAAGGGQPKGRANSKQARVLALLCGP
Ga0310915_1064151813300031573SoilMSKRKPARTIKARSASKIGSKPAGSGQPTGRANSKQAWVLA
Ga0310915_1127951913300031573SoilMSKRKPARTIKARPASRIRSKAAGSGQPTGRANSKQARVLALLCGPSGATIATVTRS
Ga0318555_1052222513300031640SoilMSKRKPARTIKARSASKIRSKVAGSRQPTGQANSKQAWVLALLCGPNGATIATVTRST
Ga0318561_1070585313300031679SoilMSKRKPARTIKARSASKIRSKAAGSGQPKGRANSKQARVLALLCGPSGATI
Ga0318574_1051297413300031680SoilMSKRKPARPRRARSASKIRSKAAGGGQPKGRANSKQARVLALLC
Ga0306918_1107237813300031744SoilMSKRKPARIIEARTASKIRSKVAGSRQPTGQANSKQAWVLALL
Ga0306918_1142069213300031744SoilMSKRKPARTIKARSASKIGSKAAGSGQPTGRANSK
Ga0306918_1150377013300031744SoilMSKRKPARTIKVRSASTIRSKAAGSGQPKGRANSKQARVLALLCGPSGATIATVTRS
Ga0318492_1049457033300031748SoilMSKRKPARTIKARPASKLRPKAAGSDQPKGRANSKQAWVLALLCGPSGATIATVTRSTG
Ga0318521_1026702413300031770SoilMSKRKPARTIKARSASKIRSKAAGSGQPTGRANSK
Ga0318543_1035792313300031777SoilMSKRKPARTIKARSASKIRLKTAGSGQPKGRANSKQARVLALLCG
Ga0318543_1039299613300031777SoilMSKRKPARTIKARSASKIRSKAAGSGQPKGRANSKQARVLALLCGPSG
Ga0318543_1046888423300031777SoilMSKRKPARTIKARPASKIRSKAAAGSGQPKGRANSKQARVLALLCGPSGATIATVT
Ga0318566_1019500513300031779SoilMSKRKPARTIKARPASKIRPKAAGSDQPKGRANSKQAWV
Ga0318566_1054532513300031779SoilMSKRKPARPRRARSASKIRSKAAGGGQPKGRANSKQAR
Ga0318548_1051933923300031793SoilMSKRKPARNIKARSASKIPSKPAGSGQPEERANSKQAWVLALLCGPSGA
Ga0318503_1031832523300031794SoilMSKRKPARTIKARSASKIRSKAAGSGQPKGRANSKQARVLALLCGPS
Ga0318557_1046926013300031795SoilVSKRKPARTIKARSASKIRSKAAGSGQPTGRANSKQARVLALLCG
Ga0318550_1063268413300031797SoilMSKRKAARTTKARSSKIPANSAGSGQPTRQANSKQAWVLALLCG
Ga0318497_1048448513300031805SoilMSKRKPARTIKVRSASTIRSKAAGSGQPTGRANSKQARVLA
Ga0318499_1022821913300031832SoilMSKRKPARSIETRSASKAAGSVQPTGRADSKQAWVLALLCGPSGATI
Ga0318499_1039244613300031832SoilMSKRKPARPIKAQSASEIRSKAAGSGQPKERANSKQAWVLALLCGP
Ga0310917_1099712013300031833SoilMSKRKPARTIKARPASKIRSKAAAGSGQPKGRANSKQARVLALLCGPSGA
Ga0318495_1037019013300031860SoilMSKRKPARTIKARPASKIRSKAAAGSGQPKGRANSKQARVLALLCG
Ga0306919_1041353923300031879SoilMSKRKPARTIKARSASKIRSKAAGSGQPKGRANSKQARVL
Ga0318544_1039093123300031880SoilMSKRKPARPRRARSASKIRSKAAGGGQPKGRANSKQAWVLALLCGPSGATI
Ga0306925_1109089813300031890SoilMSKRKPARTIKARSASEIRSHAAGSGQPKGRANSKQAWVLALLCGPSGATIATVTRST
Ga0306925_1151672223300031890SoilMSKRKPARPRRARSASKIRSKAAGGGQPKGRANSKQAWVLALLCGPSGA
Ga0318536_1046040813300031893SoilMSKRKPARTIKARSASKIGSKAAGSGQPTGRANSKQARVLALLCGPSGATIATVT
Ga0318520_1070765623300031897SoilMSKRKPARTIKARSASKIRLKTAGSGQPKGRANSKQARVLALLCGPSGATIATV
Ga0306923_1121117023300031910SoilMSKRKPARTIKARSASKIRSKAAGSGQPKGRATSKQARVLALLCGPSGATIATV
Ga0306923_1164564313300031910SoilMSKRKPARTIEARSASKIRSKAAGSGQPKGRANSKQARVLALLCGPSGATIA
Ga0306921_1227261313300031912SoilMSKRKPARTIKARSGSGNCPKAAGSGQPTGQANSKQAWVLALLCGP
Ga0310912_1075878913300031941SoilMSKRKPARTIKARSASKIGSKAAGSGQPTGRANSKQARVLALLCGPSGATIATVTR
Ga0310913_1007408313300031945SoilMSKRKPARTIKARSASKIRSKVAGSRQPTGQANSKQAWVLALLCGPNGA
Ga0310910_1054501933300031946SoilMSKRKPARTIKARSASKIGSKAAASGQPTGRANSKQARVLALLCGPSGATIATVTRS
Ga0310910_1151330013300031946SoilMSKRKPARTIKARSASKIGSKAAGSGQPTGRANSKQARVLAL
Ga0310909_1122367723300031947SoilMSKRKPARIIEARTASKIRSKVAGSGQPTGQANSKQAWVLALLCGP
Ga0306926_1266681813300031954SoilMSKRKPARTIKVRSASTIRSKAAGSGQPKGRANSKEARVL
Ga0318530_1037036913300031959SoilMSKRKPARTIKARSASKIGSKAAGSGQPKGRANSKQARVLALLC
Ga0318531_1037617613300031981SoilMSKRKPARTIKARPASKIRPKAAGSDQPKGRANSKQARVLALL
Ga0318531_1048079413300031981SoilMSKRKPARTIKARPASKIRSKAAAGSGQPKGRANSKQARVLALLCGPSGATIATV
Ga0318569_1018421413300032010SoilMSKRKPARTIKARSASKIRSKVAGSRQPTGQANSKQA
Ga0310911_1005923843300032035SoilMSKRKPARTIKARPASKIRSKAAAGSGQPKGRANSKQARVLALLCGPSGAT
Ga0318549_1040164213300032041SoilMSKRKPARTIKARPASKIRPKAAGSDQPKGRANSKQARV
Ga0318556_1047179713300032043SoilVSKRKPARTIEARSASKIRSKAAGSGQPKGRGNSKQAWVLALLCGPSGATIA
Ga0318533_1106664013300032059SoilMSKPKPARTIKARSASKIRSKPAGSGQPTGRANSKQARVL
Ga0318510_1018850913300032064SoilMSKRKPARTIKARSASKIGSKAAASGQPTGRANSKQARVLALL
Ga0318524_1063797113300032067SoilMSKRKPARTIKARSASKIGSKAAASGQPTGRANSK
Ga0318540_1016111023300032094SoilMSKRKPARTIKARSASEIRSHAAGSGQPTGRATSKQARVLALLCGPS
Ga0306920_10180280423300032261SoilMSKRKPARTIKARPASKIRSKAAGSGQPTGRANSKQAWVLALLCGPSGAT
Ga0306920_10215907023300032261SoilMSKRKPARTIKARSASKIRSKAAGGGQPKGRANSKQARVLALLCGPSGATIAT
Ga0306920_10258452423300032261SoilMSKRKPARTIKARSASKIGSKAAGSGQPTGRANSKQ


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