Metagenome Family F105517

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F105517
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	130 residues
Representative Sequence	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTAPAFDGMLNDHVRVAYETPSGDQSDSICLLLTTDVSADGSAPACPP
Number of Associated Samples	84
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.00 %
% of genes near scaffold ends (potentially truncated)	65.00 %
% of genes from short scaffolds (< 2000 bps)	88.00 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (81.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (9.000 % of family members)
Environment Ontology (ENVO)	Unclassified (42.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 15.15% β-sheet: 27.88% Coil/Unstructured: 56.97%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.1.25.1: LEA14-like	d1xo8a_	1xo8	0.55432
f.6.1.0: automated matches	d6rhvg_	6rhv	0.53145
b.1.4.0: automated matches	d6jz2a2	6jz2	0.53056
b.1.4.1: beta-Galactosidase/glucuronidase domain	d1jz8a1	1jz8	0.5303
b.7.1.0: automated matches	d3fdwa_	3fdw	0.52925

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF02954	HTH_8	39.00
PF13185	GAF_2	3.00
PF02852	Pyr_redox_dim	1.00
PF02224	Cytidylate_kin	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG0283	Cytidylate kinase	Nucleotide transport and metabolism [F]	1.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.00 %
Unclassified	root	N/A	19.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.00 %
Unclassified	root	N/A	19.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.00 %
Unclassified	root	N/A	19.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	72.00 %
Unclassified	root	N/A	19.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.00 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	70.00 %
Unclassified	root	N/A	19.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	70.00 %
Unclassified	root	N/A	19.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.00 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	20.00 %
Unclassified	root	N/A	19.00 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	11.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	20.00 %
Unclassified	root	N/A	19.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.00 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1.00 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	1.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	20.00 %
Unclassified	root	N/A	19.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.00 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	1.00 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	1.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	20.00 %
Unclassified	root	N/A	19.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.00 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1.00 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	1.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	20.00 %
Unclassified	root	N/A	19.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.00 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1.00 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_118185408	Not Available	536	Open in IMG/M
3300004156\|Ga0062589_101734777	Not Available	624	Open in IMG/M
3300004156\|Ga0062589_101825997	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	611	Open in IMG/M
3300004157\|Ga0062590_100456986	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1071	Open in IMG/M
3300004463\|Ga0063356_100337176	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1896	Open in IMG/M
3300004480\|Ga0062592_100584347	Not Available	945	Open in IMG/M
3300004480\|Ga0062592_102619719	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300004643\|Ga0062591_100218364	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1420	Open in IMG/M
3300005093\|Ga0062594_100568996	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	983	Open in IMG/M
3300005218\|Ga0068996_10076906	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	711	Open in IMG/M
3300005290\|Ga0065712_10823267	Not Available	505	Open in IMG/M
3300005328\|Ga0070676_10011926	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	4736	Open in IMG/M
3300005329\|Ga0070683_100012077	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	7493	Open in IMG/M
3300005329\|Ga0070683_100934844	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	832	Open in IMG/M
3300005335\|Ga0070666_10298666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1146	Open in IMG/M
3300005337\|Ga0070682_100449989	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	986	Open in IMG/M
3300005338\|Ga0068868_100567803	Not Available	1002	Open in IMG/M
3300005340\|Ga0070689_101900879	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	543	Open in IMG/M
3300005343\|Ga0070687_100502299	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	816	Open in IMG/M
3300005343\|Ga0070687_100721068	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	698	Open in IMG/M
3300005344\|Ga0070661_101345239	Not Available	600	Open in IMG/M
3300005353\|Ga0070669_101655225	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	557	Open in IMG/M
3300005353\|Ga0070669_101672803	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	554	Open in IMG/M
3300005355\|Ga0070671_100592549	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	958	Open in IMG/M
3300005356\|Ga0070674_101222751	Not Available	668	Open in IMG/M
3300005436\|Ga0070713_102022859	Not Available	559	Open in IMG/M
3300005456\|Ga0070678_100896002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	811	Open in IMG/M
3300005466\|Ga0070685_10131483	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1565	Open in IMG/M
3300005466\|Ga0070685_10911704	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	655	Open in IMG/M
3300005543\|Ga0070672_100137926	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2010	Open in IMG/M
3300005713\|Ga0066905_102336693	Not Available	500	Open in IMG/M
3300005842\|Ga0068858_100410364	All Organisms → cellular organisms → Bacteria → Proteobacteria	1302	Open in IMG/M
3300005842\|Ga0068858_100960567	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	837	Open in IMG/M
3300005843\|Ga0068860_100685852	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1034	Open in IMG/M
3300005937\|Ga0081455_10748078	Not Available	618	Open in IMG/M
3300006178\|Ga0075367_11103817	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	507	Open in IMG/M
3300006237\|Ga0097621_101036680	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	768	Open in IMG/M
3300009156\|Ga0111538_14086118	Not Available	504	Open in IMG/M
3300009551\|Ga0105238_12119181	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	597	Open in IMG/M
3300010399\|Ga0134127_11374703	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	776	Open in IMG/M
3300010401\|Ga0134121_10107032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2350	Open in IMG/M
3300010403\|Ga0134123_10079490	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2551	Open in IMG/M
3300011420\|Ga0137314_1075522	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	820	Open in IMG/M
3300011432\|Ga0137428_1027030	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1455	Open in IMG/M
3300011435\|Ga0137426_1113682	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300011437\|Ga0137429_1155035	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300012159\|Ga0137344_1038065	Not Available	830	Open in IMG/M
3300012212\|Ga0150985_101157075	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1611	Open in IMG/M
3300012212\|Ga0150985_110342349	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300012212\|Ga0150985_116348541	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2820	Open in IMG/M
3300012227\|Ga0137449_1096324	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300012231\|Ga0137465_1069183	Not Available	1051	Open in IMG/M
3300012353\|Ga0137367_10147379	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1719	Open in IMG/M
3300012469\|Ga0150984_105965987	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	918	Open in IMG/M
3300012469\|Ga0150984_123408406	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	981	Open in IMG/M
3300012532\|Ga0137373_11006264	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	603	Open in IMG/M
3300012914\|Ga0157297_10243632	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	647	Open in IMG/M
3300012955\|Ga0164298_11206418	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	574	Open in IMG/M
3300012961\|Ga0164302_10621661	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	787	Open in IMG/M
3300012987\|Ga0164307_10319490	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1114	Open in IMG/M
3300013297\|Ga0157378_10309779	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1531	Open in IMG/M
3300013306\|Ga0163162_12374716	Not Available	609	Open in IMG/M
3300013308\|Ga0157375_11080588	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	939	Open in IMG/M
3300014326\|Ga0157380_12132348	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	624	Open in IMG/M
3300014969\|Ga0157376_10320229	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1474	Open in IMG/M
3300018481\|Ga0190271_11020968	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300021082\|Ga0210380_10022726	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2665	Open in IMG/M
3300024187\|Ga0247672_1003004	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2737	Open in IMG/M
3300024219\|Ga0247665_1008609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1133	Open in IMG/M
3300024224\|Ga0247673_1003946	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1808	Open in IMG/M
3300025315\|Ga0207697_10053623	All Organisms → cellular organisms → Bacteria	1670	Open in IMG/M
3300025919\|Ga0207657_10315895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1236	Open in IMG/M
3300025928\|Ga0207700_11367390	Not Available	630	Open in IMG/M
3300025930\|Ga0207701_10005250	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	13038	Open in IMG/M
3300025931\|Ga0207644_10123352	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1975	Open in IMG/M
3300025933\|Ga0207706_11199691	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	631	Open in IMG/M
3300025937\|Ga0207669_11055449	Not Available	684	Open in IMG/M
3300025937\|Ga0207669_11916971	Not Available	506	Open in IMG/M
3300025940\|Ga0207691_10137440	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2155	Open in IMG/M
3300025940\|Ga0207691_10315008	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1342	Open in IMG/M
3300025944\|Ga0207661_10144663	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2049	Open in IMG/M
3300025944\|Ga0207661_10606292	All Organisms → cellular organisms → Bacteria → Proteobacteria	1005	Open in IMG/M
3300025960\|Ga0207651_11310591	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	651	Open in IMG/M
3300025960\|Ga0207651_11998883	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	521	Open in IMG/M
3300026121\|Ga0207683_10160797	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2030	Open in IMG/M
3300028072\|Ga0247675_1063709	Not Available	554	Open in IMG/M
3300028145\|Ga0247663_1005175	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1703	Open in IMG/M
3300028379\|Ga0268266_11903561	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	569	Open in IMG/M
3300028381\|Ga0268264_10569496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1113	Open in IMG/M
3300028381\|Ga0268264_10578412	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1105	Open in IMG/M
3300028819\|Ga0307296_10395378	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	755	Open in IMG/M
3300031854\|Ga0310904_10258806	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1082	Open in IMG/M
3300031908\|Ga0310900_10150389	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1575	Open in IMG/M
3300031939\|Ga0308174_11299432	Not Available	622	Open in IMG/M
3300031939\|Ga0308174_11991079	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	500	Open in IMG/M
3300031944\|Ga0310884_10327968	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	861	Open in IMG/M
3300032000\|Ga0310903_10829296	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	507	Open in IMG/M
3300032003\|Ga0310897_10400200	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	649	Open in IMG/M
3300032179\|Ga0310889_10668720	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	540	Open in IMG/M
3300033551\|Ga0247830_11297523	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	582	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.00%
Host-Associated	Host-Associated	44.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	47.00%
Plants	Host-Associated → Plants	44.00%
Aquatic	Environmental → Aquatic	9.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.00%
Sediment	Environmental → Aquatic → Sediment	7.00%
Roots	Host-Associated → Plants → Roots	2.00%
Freshwater	Environmental → Aquatic → Freshwater	1.00%
Marine	Environmental → Aquatic → Marine	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	20.00%
Loam	Environmental → Terrestrial → Soil → Loam	14.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.00%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.00%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.00%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.00%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.00%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	20.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.00%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.00%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.00%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.00%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.00%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.00%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	7.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.00%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.00%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	5.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.00%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.00%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.00%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.00%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.00%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.00%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.00%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.00%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.00%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.00%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011435	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012227	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT436_2	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028072	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16	Environmental	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1181854081	3300002568	Soil	MNALPRSTRTRTPLRRRLLKLATLLGAFTILWACNAPFIPVPPPGASFTSALEDDGAGGQKTVWITHGLPSSNAAFAYFTIINERTQNGVITVAGADGSYVAPSFDGMLNDHIKIAYKTSAGDQSDSICLLLTTDVSPAGSAPACPP*
Ga0062589_1017347771	3300004156	Soil	MNAMRRRLGRLATLLGAVALLWACNAPFIPVPPPGASFTSQLVDDGAGGQKTMWVSHGLPSQNAANAYFYIMNDRLGTGVIVVARPDGTYDSPAFDGAMDDRIRISYRSPVGDNYSDSICLLLTTEV
Ga0062589_1018259973	3300004156	Soil	ATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTAPAFDGMLNDHVRVAYETPSGDQSDSICLLLTTDVSADGSAPACPP*
Ga0062590_1004569863	3300004157	Soil	LGGLLGLFTVLWACNAPFIPVPPPGATFTSELVDDGAGGQKTVWVTHGLPSGNAAFAHFYILNERTQNGVITVAGADGSYTAPAIDGVLNDHVRIAYETPSGSQSDSLCLLLTTDVSPDGSAPACPP*
Ga0063356_1003371763	3300004463	Arabidopsis Thaliana Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTSPPFDGMLNDHVRVGYETPSGDQSDSICLLLTTDVSADGSAPACPP*
Ga0062592_1005843471	3300004480	Soil	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTSPAFDGMLNDHVRVGYETPSGDQSDSI
Ga0062592_1026197192	3300004480	Soil	ATLLGAVALLWACNAPFIPVPPPGASFTSQLVDDGAGGQKTMWVSHGLPSQNAANAYFYIMNDRLGTGVIVVARPDGTYDSPAFDGAMDDRIRISYRSPVGDNYSDSICLLLTTEVVAAGSAPLCP*
Ga0062591_1002183642	3300004643	Soil	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSGNAASAYFYILNERTQNGVITVAGADGSYTAPAIDGVLNDHVRIAYETPSGSQSDSLCLLLTTDVSPDGSAPACPP*
Ga0062594_1005689962	3300005093	Soil	MNALRRKLRGRLLKLATLLGAFTILWACNAPFIPVPPPGASFTSELVDDGAGSQKTVWITHGLPSANAAGAFFYIFNDRTQEGVITVAGADGSYTAPAMDGILNDHVRIGYETPSGAQSDSICVLLTTDVSPAGSAPLCPP*
Ga0068996_100769061	3300005218	Natural And Restored Wetlands	ALPIMNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSGNAASAYFYIFNERTQNGVITVAGADGSYTAPAIDGMLNDHVRIAYETPSGSQSDSLCLLLTTEVSADGSAPACPP*
Ga0065712_108232671	3300005290	Miscanthus Rhizosphere	MNALRRKLKGRLLKLATLLGAFTVLWACNAPFIPVPPPGASFTSALVDDGAGGQKTVWVTHGLPSTNAAGAYFYIFNDRTQEGVITVAGADGTYAAPPIDGVVNDHIRIGYETPSGAQSDSICVLLTTDVSAAG
Ga0070676_100119265	3300005328	Miscanthus Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVAHGLPSTNAAFAYFSIFNERTQNGVITVAGADGSYTAPAFDGMLNDHVRVGYETPSGDQSDSICLLLTTDVSADGSAPACPP*
Ga0070683_1000120774	3300005329	Corn Rhizosphere	MNALRRKLKGRLLKLATLLGAFTVLWACNAPFIPVPPPGASFTSALVDDGAGGQKTVWVTHGLPSTNAAGAYFYIFNDRTQEGVITVAGADGTYAAPPIDGVVNDHIRIGYETPSGAQSDSICVLLTTDVSAAGSAPLCPP*
Ga0070683_1009348443	3300005329	Corn Rhizosphere	PFIPVPPPGATFTSQLVDDGAGGQKTVWITHGLPADNAAFAYYYVFNETQQHGIIAVAGADGTFTGRPMDGTMGDHVRIAYETPSGAQSDSICLLLTTEVAGSSAPACPPAP*
Ga0070666_102986662	3300005335	Switchgrass Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTAPAFDGILNDHIRVGYETPSGDQSDSICLLLTTDVSADGSAPACPP*
Ga0070682_1004499893	3300005337	Corn Rhizosphere	ASFTSELVDDGAGSQKTVWITHGLPSANAAGAFFYIFNDRTQEGVITVAGADGSYTAPAMDGILNDHVRIGYETPSGAQSDSICVLLTTDVSPAGSAPLCPP*
Ga0068868_1005678031	3300005338	Miscanthus Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVAHGLPSTNAAFAYFSIFNERTQNGVITVAGADGSYTAPAFDGMLNDHVRVGYETPSGDQSDSICLLLTTDVSADG
Ga0070689_1019008791	3300005340	Switchgrass Rhizosphere	LLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTAPAFDGILNDHIRVGYETPSGDQSDSICLLLTTDVSADGSAPACPP*
Ga0070687_1005022991	3300005343	Switchgrass Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTAPAFDGMLNDHVRVAYETPSGDQSDSICLLLTTDVSADG
Ga0070687_1007210683	3300005343	Switchgrass Rhizosphere	LGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVAHGLPSTNAAFAYFSIFNERTQNGVITVAGADGSYTAPAFDGMLNDHVRVGYETPSGDQSDSICLLLTTDVSADGSAPACPP*
Ga0070661_1013452391	3300005344	Corn Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSGNVASAYFYILNERTQNGVITVAGADGSYTAPAIDGVLNDHVRIAYETPSGSQSDSLCLLLTTD
Ga0070669_1016552251	3300005353	Switchgrass Rhizosphere	KLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVAHGLPSTNAAFAYFSIFNERTQNGVITVAGADGSYTAPAFDGMLNDHVRVGYETPSGDQSDSICLLLTTDVSADGSAPACPP*
Ga0070669_1016728031	3300005353	Switchgrass Rhizosphere	KLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTAPAFDGMLNDHVRVAYETPSGDQSDSICLLLTTDVSADGSAPACPP*
Ga0070671_1005925493	3300005355	Switchgrass Rhizosphere	VPEELPIMNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSGNAASAYFYILNERTQNGVITVAGADGSYTAPAIDGVLNDHVRIAYETPSGSQSDSLCLLLTTDVSPDGSAPACPP*
Ga0070674_1012227511	3300005356	Miscanthus Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSGNAASAYFYILNERTQNGVITVAGADGSYTAPAIDGVLNDHVRIAYETPSGSQSDSLCLLLTTDVSPDGSAPPARRNRAGAGPLRARCARRPG*
Ga0070713_1020228591	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNALRRRLLKLATLLGALALLWSCNAPFIPVPPPGATFTSQLVDDGMGGQKTVWITHGLPSTNAAFATYYVFNDRLKSGVIATAGADGTFTGIPMDGMQNDHVLLSYRTPSGDYSDSLCLLLTTDVSPAG
Ga0070678_1008960022	3300005456	Miscanthus Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSGNAASAYFYILNERTQNGVITVAGADGSYTAPAIDGVLNDHVRIAYETPSGSQSDSLCLLLTTDVSPDGSAPAC
Ga0070685_101314833	3300005466	Switchgrass Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSGNAAFAYFYILNERTQNGVITVAGADGSYTAPAIDGVLNDHVRIAYETPSGSQSDSLCLLLTTDVSPDGSAPACPP*
Ga0070685_109117043	3300005466	Switchgrass Rhizosphere	ATFTSALVDDGAGGQKTVWVAHGLPSTNAAFAYFSIFNERTQNGVITVAGADGSYTAPAFDGMLNDHVRVGYETPSGDQSDSICLLLTTDVSADGSAPACPP*
Ga0070672_1001379261	3300005543	Miscanthus Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTSPPFDGMLNDHVRVGYETPSGDQSDSICLLLTTDVSADG
Ga0066905_1023366931	3300005713	Tropical Forest Soil	MNAMRRRLLKFATLLGAMALLWACNAPFIPVPPPGASFTTQLVDDGAGGQKTVWVTHGVPYSNAALARFFIFNEATGNGVITTAGIDGTYTAPAIDGTMNDHIQISFQAPGGDYSESTCLLLS
Ga0068858_1004103642	3300005842	Switchgrass Rhizosphere	MTEMPGKPQGRTPLRRRLLKLATLLSAFTILWACNAPFIPVPPPGASFSSALVDDGAGGQKTVWVTHGLPSENAAYAYFYIFNDRTKDGVITVAGADGSYAAPALDGMLNDHIRIAYETPAGAQSDSICLLLTTDVSPAGSAPACPP*
Ga0068858_1009605671	3300005842	Switchgrass Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSGNAASAYFYILNERTQNGVITVAGADGSYTAPAIDGVLNDHVRIAYETPSGSQSDSLCLLLTTDVSPDGSAPA
Ga0068860_1006858521	3300005843	Switchgrass Rhizosphere	PPPGATFTSALVDDGAGGQKTVWVTHGLPSGNAASAYFYILNERTQNGVITVAGADGSYTAPAIDGVLNDHVRIAYETPSGSQSDSLCLLLTTDVSPDGSAPACPP*
Ga0081455_107480781	3300005937	Tabebuia Heterophylla Rhizosphere	MVNALRRRLLKLGTLLGALTLVWACNAPFIPVPPPGASFTSELVDDGMGGQMTLWTTHGLPSANAANATFFVFNSNANAGVIIVAAPDGTYTSPAFEGAMNDQVRISYRTPDGDQSDSICLLLTTDVGAGG
Ga0075367_111038172	3300006178	Populus Endosphere	WACNAPFIPVPPPGASFSSALVDDGAGGQKTVWVAHGLPSSNAANAYFTVFNERTQDGVITVAGPDGSYTTPSFDGVLNDHVKVAYKTQSGDQSDSICLLLTTDVSGAGSAPACPP*
Ga0097621_1010366801	3300006237	Miscanthus Rhizosphere	ALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSGNAASAYFYILNERTQNGVITVAGADGSYTAPAIDGVLNDHVRIAYETPSGSQSDSLCLLLTTDVSPDGSAPACPP*
Ga0111538_140861181	3300009156	Populus Rhizosphere	MNAMRRRLSKLATLLGAVALLWACNAPFIPVPPPGAAFTSQLVDDGMGGQKTVWITHGLPSSNAAFAYYYIFNQTRGFGIIAVAGADGTFTGIPMEGMMNDEVRVAYETPSGDQSDSICLLLTEEVSATTGSA
Ga0105238_121191812	3300009551	Corn Rhizosphere	FTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVAHGLPSTNAAFAYFSIFNERTQNGVITVAGADGSYTAPAFDGMLNDHVRVGYETPSGDQSDSICLLLTTDVSADGSAPACPP
Ga0134127_113747031	3300010399	Terrestrial Soil	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTAPAFDGMLNDHVRVAYETPSGDQSDSICLLLTTDVSADGSAPACPP*
Ga0134121_101070322	3300010401	Terrestrial Soil	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSGNAASAYFYILNERTQNGVITVAGADGSYTAPAIDGVLNDHVRIAYETPSGSQSDSLCLLLTTDVSPDGSAPACPA*
Ga0134123_100794902	3300010403	Terrestrial Soil	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTEWDAHGLPSTNAAFAYFSIFNERTQNGVITVAGADGSYTAPAFDGMLNDHVRVGYETPSGDQSDSICLLLTTDVSADGSAPACPP*
Ga0137314_10755221	3300011420	Soil	MNAMRRRLARLATLLGAVALLWACNAPFIPVPPPGASFTSQLVDDGAGGQKTMWVTHGLPSMHAAGAYFYIVNERLQTGVIVVARPDGTYDSPAFDGMMDDRIRIGYSPVGDTYSDSICLLLTTEVAAGGSAPLCPSP*
Ga0137428_10270302	3300011432	Soil	MNAMRRRLARLATLLGAVALLWACNAPFIPVPPPGASFTSQLVDDGAGGQTTEWVAHGLPSENAANALFYIFNEAEQGGVIVVARPDGTYDSLPFAGMINDPVRISYRSPTGDNYSDSICLLLTTDVDAVGSAPRCPSP*
Ga0137426_11136821	3300011435	Soil	IPVPPPGASFTSELVDDGMGGQKPLWTTHGLPSMNAAGAYFYIVNDNTQRGVIVVADPDGTYDAPAFDGVMGDRVRISYQSPSGDTYSDSICLLLTTEVAAGGSAPLCPSP*
Ga0137429_11550351	3300011437	Soil	CNAPFIPVPPPGASFTSQLVDDGAGGQKTMWVTHGLPSMHAAGAYFYIVNANTQRGVIVVADPDGTYDAPAFDGVMGDRVRISYQSPSGDTYSDSICLLLTTEVAAGGSAPLCPSP*
Ga0137344_10380651	3300012159	Soil	MNAMRRRLARLATLLGAVALLWACNAPFIPVPPPGASFTSELVDDGMGGQKPLWTTHGLPSMNAAGAYFYIVNDNTQRGVIVVARPDGTYDSPSFDGMMNDEIRISYQSPSGDTYSDSICLLLTQTSTRAARRHPWNLYVRIRFRSYSFPYGRG
Ga0150985_1011570751	3300012212	Avena Fatua Rhizosphere	MSPLRRRFLKFATLLGAVALLWACNAPFIPVPPPGASFTSELADDGAGGQKTVWITHGLPSNNAAGAYFYIFNETRQGGIIAVAGADGTYTGMPMDGAIGDHVRIAYETPSGAQSDSICLLLTTDVGACGSAPPCP*
Ga0150985_1103423492	3300012212	Avena Fatua Rhizosphere	ACNAPFIPVPPPGASFTSQLVDDGMGGQKTVWVTHGLPASNAAFATYFVYNERLGSGIIATAGADGTFTGIPMDGVQNDHVRLSYQTPSGDYSDSLCLLLTTDVVPGGTSAPRCPSP*
Ga0150985_1163485412	3300012212	Avena Fatua Rhizosphere	MNALPRSPRTRTPLRRRLLKLATLLGAFTILWACNAPFIPVPPPGASFTSALEDDGAGGQKTVWITHGLPSSNAAFAYFTIINERTQNGVITAAGADGTYTAPAIDGVMNDHVRITYETPSGGNYSESICLLLTTDVGSGGSAPACPP*
Ga0137449_10963241	3300012227	Soil	PPGASFTSELVDDGMGGQKPLWTTHGLPSMNAASAYFYVFNDNTQRGVIVVARPDGTYDSPPFDGTMNDRVRISYQSPSGDSYSDSICLLLTTEVDAVGSAPRCPPSP*
Ga0137465_10691831	3300012231	Soil	MNAMRRRLSKIATLLGAVALLWACNAPFIPVPPPGATFTSQLVDDGMGGQKTVWITHGLGSSNAAFAYYYIFNQTRGFGIIAVAGADGTFTGIPLEGMMNDEIRMAYETPSGDQSDSICLLL
Ga0137367_101473792	3300012353	Vadose Zone Soil	MNAMPRRPRTRTPLRRRLLKLATLLGAFTILWACNAPFIPVPPPGASFTSALVDDGGGGQKTVWITHGLPSSNAAFAYFTIVNERTQNGVITVAGSDGSYTAPSFDGVLNDHVKIAYKTPSGDQSDSICLLLTTDVSPAGSAPACPP*
Ga0150984_1059659872	3300012469	Avena Fatua Rhizosphere	MSPLRRRFLKFATLLGAVALLWACNAPFIPVPPPGASFTSELADDGAGGQKTVWITHGLPSNNAAGAYFYIFNETRQGGIIAVAGADGTYTGMPMDGAVGDHVRIAYETPSGAQSDSICLLLTTDVDPLSGSAPACPP*
Ga0150984_1234084062	3300012469	Avena Fatua Rhizosphere	MNAIPRRPRGRTPLRRRLLKLATLLGAFTILWACNAPFIPVPPPGASFTSALEDDGAGGQKTVWITHGLPSSNAAFAYFTIINERTQNGVITVAGADGSYVAPSFDGMLNDHIKIAYKTSAGDQSDSICLLLTTDVSPAGSAPACPP*
Ga0137373_110062641	3300012532	Vadose Zone Soil	ATLLGAFTILWACNAPFIPVPPPGASFTSALVDDGGGGQKTVWITHGLPSSNAAFAYFTIVNERTQNGVITVAGSDGSYTAPSFDGVLNDHVKIAYKTPSGDQSDSICLLLTTDVSPAGSAPACPP*
Ga0157297_102436322	3300012914	Soil	ATLLGALTVVFACNAPFIPVPPPGATFTAQLTDDGMGGQKTVWIAHGLPSTNAANAYFSIFNEQTQDGVITVAEPDGSYTAPSFDGTLNDHIKIAYKTPSGDQSDSICLLLTTDVSAAGSAPACPP*
Ga0164298_112064181	3300012955	Soil	PPPGASFSSELVDDGAGGQKTVWVTHGLPSENAAFAYFYIFNDRTKDGVITVAGADGSYAAPALDGMLNDHIRIAYETPSGAQSDSICLLLTTDVSPAGSAPACPP*
Ga0164302_106216611	3300012961	Soil	MTEMPGKPQGRTPLRRRLLKLATLLSAFTILWACNAPFIPVPPPGASFSSALVDDGAGGQKTVWVAHGLPSSNAANAYFTVFNERTQDGVITVARPDDSDTAPSLDGVLNHDVKVAYKTQSGDQSDSICLLLTTDVSGAGSAPACPP*
Ga0164307_103194902	3300012987	Soil	MTEMPGKPQGRTPLRRRLLKLATLLSAFTILWACNAPFIPVPPPGASFSSALVDDGAGGQKTVWVTHGLPSENAAFAYFYIFNDRTKDGVITVAGADGSYAAPALDGMLNDHIRIAYETPAGAQSDSICLLLTTDVSPAGSAPACPP*
Ga0157378_103097791	3300013297	Miscanthus Rhizosphere	PGATFTSALVDDGAGGQKTVWVTHGLPSGNAASAYFYILNARTQNGVITVAGADGSYTAPAIDGVLNDHVRIAYETPSGSQSDSLCLLLTTDVSPDGSAPACPP*
Ga0163162_123747161	3300013306	Switchgrass Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVAHGLPSTNAAFAYFSIFNERTQNGVITVAGADGSYTAPAFDGMLNDHVRVGYETPSGDQSDSICLLLTTDVS
Ga0157375_110805882	3300013308	Miscanthus Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVAHGLPSTNAAFAYFSIFNERTQNGVITVAGADGSYTAPAFDGMLNDHVRVGYETPSGDQSDSICLLLTTDVSADGSAP
Ga0157380_121323483	3300014326	Switchgrass Rhizosphere	LWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSGNAASAYFYILNERTQNGVITVAGADGSYTAPAFDGMLNDHVRVGYETPSGDQSDSICLLLTTDVSADGSAPACPP*
Ga0157376_103202292	3300014969	Miscanthus Rhizosphere	MTEMPGKPQGRTPLRRRLLKLATLLSAFTILWACNAPFIPVPPPGASFTSELVDDGAGSQKTVWITHGLPSANAAGAFFYIFNDRTQEDVITVAGADGSYTAPAMDGILNDHVRIIYETPSGAQSDSIEVLLTTDVSPAGS
Ga0190271_110209682	3300018481	Soil	MNAMRRRLSRLATLLGAVALLWACNAPFIPVPPPGASFTSQLVDDGTAGQTTEWVAHGLPSENAANAWFYIVNDRLQAGVIVVAGPDGTYDSPPFDGVMGDRVRISYQSPSGDSYSDSICLLLTTEVDAVGSAPRCPSP
Ga0210380_100227262	3300021082	Groundwater Sediment	MNAMRRRLGRLATLLGAVALLWACNAPFIPVPPPGASFSSELWVDGAGVQKTMWKTHGLPSQNAANAYFYIVNERLQTGVIVVAGPEGTYDSPAFDGMMDDRIRISYQSPTGDTYSDSLCLLLTTAVVAGGSAPLCPSP
Ga0247672_10030042	3300024187	Soil	MNALRRRLLKLGGLLGLFTVLWACNAPFIPVPPPGASFTSELVDDGAGGQKTVWITHGLPSANAANAYFYIINERTMNGVITVAGADGTYTAPALDGVMNDHVQITYSRPDGANYSDSICLLLTTEVS
Ga0247665_10086093	3300024219	Soil	RRLLKLGGLLGLFTVLWACNAPFIPVPPPGASFTSELVDDGAGGQKTVWITHGLPSANAANAYFYIINERTMNGVITVAGADGTYTAPALDGVMNDHVQITYSRPDGANYSDSICLLLTTEVSATGSAPTCPP
Ga0247673_10039463	3300024224	Soil	MNALRRRLLKLGGLLGLFTVLWACNAPFIPVPPPGASFTSELVDDGAGGQKTVWITHGLPSANAANAYFYIINERTMNGVITVAGADGTYTAPALDGVMNDHVQITYSRPDGANYSDSICLLLTTEVSATGSAPTCPP
Ga0207697_100536232	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVAHGLPSTNAAFAYFSIFNERTQNGVITVAGADGSYTAPAFDGMLNDHVRVGYETPSGDQSDSICLLLTTDVSADGSAPACPP
Ga0207657_103158951	3300025919	Corn Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTSPAFDGMLNDHVRVGYETPSGDQSDSICLLLTTDVSAD
Ga0207700_113673901	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MNALRRRLLKLATLLGALALLWSCNAPFIPVPPPGATFTSQLVDDGMGGQKTVWITHGLPSTNAAFATYYVFNDRLKSGVIATAGADGTFTGIPMDGMQNDHVLLSYRTPSGDYSDSLCLLLTTDVSPAGASAPLCP
Ga0207701_100052502	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MNALRRKLRGRLLKLATLLGAFTILWACNAPFIPVPPPGASFTSELVDDGAGSQKTVWITHGLPSANAAGAFFYIFNDRTQEGVITVAGADGSYTAPAMDGILNDHVRIGYETPSGAQSDSICVLLTTDVSPAGSAPLCPP
Ga0207644_101233523	3300025931	Switchgrass Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSGNAASAYFYILNERTQNGVITVAGADGSYTAPAIDGVLNDHVRIAYETPSGSQSDSLCLLLTTDVSPDGSAPACPP
Ga0207706_111996911	3300025933	Corn Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSGNAASAYFYILNERTQNGVITVAGADGSYTAPAIDGVLNDHVRIAYETPSGSQ
Ga0207669_110554491	3300025937	Miscanthus Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSGNAASAYFYILNERTQNGVITVAGADGSYTAPAIDGVLNDHVRIAYETPSGSQSDSLCLLLTTDVSPDGSAPPARRNRAGAGPLRARCARRPG
Ga0207669_119169711	3300025937	Miscanthus Rhizosphere	MNALRRKLRGRLLKLATLLGAFTILWACNAPFIPVPPPGASFTSELVDDGAGSQKTVWITHGLPSANAAGAFFYIFNDRTQEGVITVAGADGSYTAPAMDGILNDHVRIGYETPSGAQSD
Ga0207691_101374401	3300025940	Miscanthus Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTSPPFDGMLNDHVRVGYETPSGDQSDSICLLLTTDVSADGSAPACPP
Ga0207691_103150081	3300025940	Miscanthus Rhizosphere	LGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVAHGLPSTNAAFAYFSIFNERTQNGVITVAGADGSYTAPAFDGMLNDHVRVGYETPSGDQSDSICLLLTTDVSADGSAPACPP
Ga0207661_101446633	3300025944	Corn Rhizosphere	MNALRRKLKGRLLKLATLLGAFTVLWACNAPFIPVPPPGASFTSALVDDGAGGQKTVWVTHGLPSTNAAGAYFYIFNDRTQEGVITVAGADGTYAAPPIDGVVNDHIRIGYETPSGAQSDSICVLLTTDVSAAGSAPLCPP
Ga0207661_106062921	3300025944	Corn Rhizosphere	CNAPFIPVPPPGATFTSQLVDDGAGGQKTVWITHGLPADNAAFAYYYVFNETQQHGIIAVAGADGTFTGRPMDGTMGDHVRIAYETPSGAQSDSICLLLTTEVAGSSAPACPPAP
Ga0207651_113105911	3300025960	Switchgrass Rhizosphere	FEAVPNMNALRRKLRGRLLKLATLLGAFTILWACNAPFIPVPPPGASFTSELVDDGAGSQKTVWITHGLPSANEAGAFFYIFNDRTQEGVITVAGADGSYTAPAMDGILNDHVRIGYETPSGAQSDSICVLLTTDVSPAGSAPLCPP
Ga0207651_119988831	3300025960	Switchgrass Rhizosphere	GLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTSPAFDGMLNDHVRVGYETPSGDQSDSICLLLTTDVSADGSAPACPP
Ga0207683_101607972	3300026121	Miscanthus Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSGNAASAYFYILNERTQNGVITVAGADGSYTAPAIDGVLNDHVRISYVTPSDSQSDSICLLLTTDVSADGSAPACPP
Ga0247675_10637091	3300028072	Soil	MNALRRRLLKLGGLLGLFTVLWACNAPFIPVPPPGASFTSELVDDGAGGQKTVWITHGLPSANAANAYFYIINERTMNGVITVAGADGTYTAPALDGVMNDHVQITYSRPDGANYSDSICLLLTTEVSATGSAP
Ga0247663_10051754	3300028145	Soil	EALPIMNALRRRLLKLGGLLGLFTVLWACNAPFIPVPPPGASFTSELVDDGAGGQKTVWITHGLPSANAANAYFYIINERTMNGVITVAGADGTYTAPALDGVMNDHVQITYSRPDGANYSDSICLLLTTEVSATGSAPTCPP
Ga0268266_119035611	3300028379	Switchgrass Rhizosphere	VLWACNAPFIPVPPPGASFTSALVDDGAGGQKTVWVTHGLPSTNAAGAYFYIFNDRTQEGVITVAGADGTYAAPPIDGVVNDHIRIGYETPSGAQSDSICVLLTTDVSAAGSAPLCPP
Ga0268264_105694962	3300028381	Switchgrass Rhizosphere	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTAPAFDGMLNDHVRVAYETPSGDQSDSICLLLTTDVSADGSAPACPP
Ga0268264_105784123	3300028381	Switchgrass Rhizosphere	FIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSGNAASAYFYILNERTQNGVITVAGADGSYTAPAIDGVLNDHVRIAYETPSGSQSDSLCLLLTTDVSPDGSAPACPP
Ga0307296_103953783	3300028819	Soil	MGGQKTVWITHGLPSNNAAGAYFYIFNETYIPPTGRQGGIIVVAGADGTYTGMPMDGNMGDHVRISYETPAGAQSDSICLLLTTDVVAPSGSAPLCPP
Ga0310904_102588063	3300031854	Soil	SSVSIMNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTSPPFDGMLNDHIRVGYETPSGDQSDSICLLLTTDVSADGSAPACPP
Ga0310900_101503892	3300031908	Soil	MNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTSPPFDGMLNDHIRVGYETPSGDQSDSICLLLTTDVSADGSAPACPP
Ga0308174_112994321	3300031939	Soil	MNAILRRLCGRTPLRRRLLKLATLLGAFTILWACNAPFIPVPPPGASFTSELRDDGTGGQKTVWITHGLPSNNAAFATFIVVNESLVPRGGIVAVAGADGTYTGMPMQGAMGDHIRFAYETPAGAQSDSICLLLTTDVVAPSGS
Ga0308174_119910791	3300031939	Soil	TILWACNAPFIPVPPPGASFSSALVDDGAGGQKTVWITHGLPSSNAAFAYFSIVNDQTQKGVITVAGADGSYVAPSFDGMLNDHIKIAYKTPSGDQSDSICLLLTTDVSPGGSAPACPP
Ga0310884_103279683	3300031944	Soil	IPIMNALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTSPPFDGMLNDHIRVGYETPSGDQSDSICLLLTTDVSADGSAPACPP
Ga0310903_108292962	3300032000	Soil	NAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTSPPFDGMLNDHIRVGYETPSGDQSDSICLLLTTDVSADGSAPACPP
Ga0310897_104002002	3300032003	Soil	ALRRRILKLGGLLGLFTVLWACNAPFIPVPPPGATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTAPAFDGMLNDHVRVAYETPSGDQSDSICLLLTTDVSADGSAPACPP
Ga0310889_106687201	3300032179	Soil	ATFTSALVDDGAGGQKTVWVTHGLPSSNAALAYFFIFNERTQNGVITVAGADGTYTAPAFDGMLNDHVRVAYETPSGDQSDSICLLLTTDVSADGSAPACPP
Ga0247830_112975231	3300033551	Soil	CVIHTVFWLPAPFIPVPPPGASFTSELVDDGAGSQKTVWITHGLPSANAAGAFFYIFNDRTQEGVITVAGADGSYTAPAMDGILNDHVRIGYETPSGAQSDSICVLLTTDVSPAGSAPLCPP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F105517

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences