NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F105444

Metagenome Family F105444

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105444
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 118 residues
Representative Sequence FLHVLEIGDRDATPARRVAAIEGSGLAGAAIEGEAVVLFASAAFGEATLPDVKTRTLLLAGLEPGAPYEVQVTSGFAPGAPVWRATAEAGDEEALSLPWDAVRDGRLRLRRLR
Number of Associated Samples 77
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.00 %
% of genes near scaffold ends (potentially truncated) 97.00 %
% of genes from short scaffolds (< 2000 bps) 93.00 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (81.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(26.000 % of family members)
Environment Ontology (ENVO) Unclassified
(34.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(48.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 41.13%    Coil/Unstructured: 58.87%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.78
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.18.1.0: Galactose-binding domain-liked2j1ra_2j1r0.64
b.18.1.0: Galactose-binding domain-liked2j1ra_2j1r0.64
b.18.1.22: Galactose-binding domain-liked1o59a21o590.61
b.18.1.3: Galactose-binding domain-liked1w99a31w990.61
b.18.1.22: Galactose-binding domain-liked1o59a21o590.61
b.18.1.3: Galactose-binding domain-liked1w99a31w990.61
b.18.1.9: Galactose-binding domain-liked1tvga_1tvg0.6
b.18.1.9: Galactose-binding domain-liked1tvga_1tvg0.6
b.18.1.0: Galactose-binding domain-liked4arxa34arx0.59
b.18.1.0: Galactose-binding domain-liked4arxa34arx0.59

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF01408GFO_IDH_MocA 7.00
PF02012BNR 1.00


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms81.00 %
UnclassifiedrootN/A19.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004463|Ga0063356_104286232All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300005328|Ga0070676_11196939Not Available577Open in IMG/M
3300005336|Ga0070680_100599768All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium945Open in IMG/M
3300005343|Ga0070687_101461842All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Sumerlaeota → unclassified Candidatus Sumerlaeota → BRC1 bacterium SCGC AAA257-C11513Open in IMG/M
3300005345|Ga0070692_10590637All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300005438|Ga0070701_11249285All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium529Open in IMG/M
3300005441|Ga0070700_100545643All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium900Open in IMG/M
3300005518|Ga0070699_101532868All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300006224|Ga0079037_100301181All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1486Open in IMG/M
3300006847|Ga0075431_102232069Not Available502Open in IMG/M
3300006853|Ga0075420_100425947All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1147Open in IMG/M
3300006880|Ga0075429_101487187All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300009087|Ga0105107_10460597All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium886Open in IMG/M
3300009091|Ga0102851_11627564All Organisms → cellular organisms → Bacteria → PVC group723Open in IMG/M
3300009091|Ga0102851_13030238Not Available539Open in IMG/M
3300009091|Ga0102851_13399179Not Available511Open in IMG/M
3300009091|Ga0102851_13511700Not Available503Open in IMG/M
3300009094|Ga0111539_10060885All Organisms → cellular organisms → Bacteria4473Open in IMG/M
3300009094|Ga0111539_13272968Not Available522Open in IMG/M
3300009146|Ga0105091_10112346All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1256Open in IMG/M
3300009146|Ga0105091_10389291All Organisms → cellular organisms → Bacteria → Acidobacteria693Open in IMG/M
3300009156|Ga0111538_13090684Not Available581Open in IMG/M
3300009162|Ga0075423_10571000All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1191Open in IMG/M
3300009167|Ga0113563_10972644All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium975Open in IMG/M
3300009167|Ga0113563_12954716All Organisms → cellular organisms → Bacteria → PVC group576Open in IMG/M
3300009168|Ga0105104_10660135Not Available599Open in IMG/M
3300009179|Ga0115028_10420777All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium945Open in IMG/M
3300009873|Ga0131077_10112493All Organisms → cellular organisms → Bacteria3229Open in IMG/M
3300010399|Ga0134127_12852449Not Available563Open in IMG/M
3300011413|Ga0137333_1052461All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium926Open in IMG/M
3300012157|Ga0137353_1038947All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium845Open in IMG/M
3300012166|Ga0137350_1050149All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium812Open in IMG/M
3300012931|Ga0153915_10735632All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1141Open in IMG/M
3300012931|Ga0153915_12019890All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300012931|Ga0153915_12786807All Organisms → cellular organisms → Bacteria → PVC group571Open in IMG/M
3300012964|Ga0153916_12413485All Organisms → cellular organisms → Bacteria → PVC group592Open in IMG/M
3300014881|Ga0180094_1126159All Organisms → cellular organisms → Bacteria → PVC group597Open in IMG/M
3300015259|Ga0180085_1108909All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium820Open in IMG/M
3300015374|Ga0132255_103541112All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300017947|Ga0187785_10318790All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300019361|Ga0173482_10669012Not Available532Open in IMG/M
3300021082|Ga0210380_10173524All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium971Open in IMG/M
3300021090|Ga0210377_10065682All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2478Open in IMG/M
3300021090|Ga0210377_10147850All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1534Open in IMG/M
3300025160|Ga0209109_10516840Not Available539Open in IMG/M
3300026075|Ga0207708_10494395All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1024Open in IMG/M
3300027871|Ga0209397_10152407All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1028Open in IMG/M
3300027880|Ga0209481_10743483All Organisms → cellular organisms → Bacteria → Acidobacteria510Open in IMG/M
3300027885|Ga0209450_10058389All Organisms → cellular organisms → Bacteria2417Open in IMG/M
3300027890|Ga0209496_10093980All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1268Open in IMG/M
(restricted) 3300028043|Ga0233417_10471310Not Available586Open in IMG/M
3300030336|Ga0247826_10226901All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1296Open in IMG/M
3300031455|Ga0307505_10660609All Organisms → cellular organisms → Bacteria → PVC group511Open in IMG/M
3300031834|Ga0315290_11432546All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300031847|Ga0310907_10168475All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1022Open in IMG/M
3300031873|Ga0315297_10646039All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium887Open in IMG/M
3300031965|Ga0326597_10273162All Organisms → cellular organisms → Bacteria1937Open in IMG/M
3300031997|Ga0315278_11611368All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300032012|Ga0310902_10545895All Organisms → cellular organisms → Bacteria762Open in IMG/M
3300032122|Ga0310895_10350750All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300032143|Ga0315292_10282015All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1379Open in IMG/M
3300032143|Ga0315292_11384914Not Available573Open in IMG/M
3300032164|Ga0315283_11724194All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300032164|Ga0315283_12027444Not Available571Open in IMG/M
3300032177|Ga0315276_11949634All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300032177|Ga0315276_12251808All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300032342|Ga0315286_10823394All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium937Open in IMG/M
3300032397|Ga0315287_12296693All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300032516|Ga0315273_12540599All Organisms → cellular organisms → Bacteria → Acidobacteria589Open in IMG/M
3300032770|Ga0335085_10507954All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1374Open in IMG/M
3300032829|Ga0335070_10040941All Organisms → cellular organisms → Bacteria5173Open in IMG/M
3300033004|Ga0335084_10425711All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1366Open in IMG/M
3300033004|Ga0335084_10661589All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1066Open in IMG/M
3300033406|Ga0316604_10503837All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300033408|Ga0316605_10766330All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium915Open in IMG/M
3300033414|Ga0316619_10665159All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium875Open in IMG/M
3300033414|Ga0316619_12057983Not Available521Open in IMG/M
3300033416|Ga0316622_100004604All Organisms → cellular organisms → Bacteria10157Open in IMG/M
3300033416|Ga0316622_100534794All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1340Open in IMG/M
3300033416|Ga0316622_101959122All Organisms → cellular organisms → Bacteria → Acidobacteria681Open in IMG/M
3300033416|Ga0316622_102182804All Organisms → cellular organisms → Bacteria → PVC group642Open in IMG/M
3300033416|Ga0316622_102717126All Organisms → cellular organisms → Bacteria → PVC group568Open in IMG/M
3300033416|Ga0316622_102873566Not Available551Open in IMG/M
3300033418|Ga0316625_102640083All Organisms → cellular organisms → Bacteria → PVC group511Open in IMG/M
3300033419|Ga0316601_100264904All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1553Open in IMG/M
3300033419|Ga0316601_100303107All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1463Open in IMG/M
3300033433|Ga0326726_12149444All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300033433|Ga0326726_12472179Not Available504Open in IMG/M
3300033482|Ga0316627_100412964All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1164Open in IMG/M
3300033482|Ga0316627_102431407All Organisms → cellular organisms → Bacteria → PVC group551Open in IMG/M
3300033483|Ga0316629_10492035All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium889Open in IMG/M
3300033486|Ga0316624_10024371All Organisms → cellular organisms → Bacteria3483Open in IMG/M
3300033487|Ga0316630_11820947Not Available556Open in IMG/M
3300033488|Ga0316621_10549832All Organisms → cellular organisms → Bacteria → Acidobacteria815Open in IMG/M
3300033489|Ga0299912_11311895Not Available522Open in IMG/M
3300033493|Ga0316631_10371627All Organisms → cellular organisms → Bacteria → PVC group586Open in IMG/M
3300033493|Ga0316631_10410302All Organisms → cellular organisms → Bacteria → PVC group560Open in IMG/M
3300033521|Ga0316616_102996552All Organisms → cellular organisms → Bacteria → PVC group636Open in IMG/M
3300034077|Ga0373899_030921All Organisms → cellular organisms → Bacteria → PVC group630Open in IMG/M
3300034149|Ga0364929_0131540All Organisms → cellular organisms → Bacteria803Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil26.00%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment13.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere8.00%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands7.00%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil5.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment4.00%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.00%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland3.00%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment3.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.00%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil2.00%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.00%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.00%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.00%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.00%
WastewaterEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater1.00%
Sediment SlurryEngineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry1.00%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300006224Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaGEnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009179Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1EnvironmentalOpen in IMG/M
3300009873Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plantEngineeredOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011413Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT231_2EnvironmentalOpen in IMG/M
3300012157Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT760_2EnvironmentalOpen in IMG/M
3300012166Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300014881Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_1DaEnvironmentalOpen in IMG/M
3300015259Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_10DEnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300021090Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redoEnvironmentalOpen in IMG/M
3300025160Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2EnvironmentalOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027871Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027885Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)EnvironmentalOpen in IMG/M
3300027890Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300028043 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MGEnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300031997Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032143Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0EnvironmentalOpen in IMG/M
3300032164Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0EnvironmentalOpen in IMG/M
3300032177Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0EnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033406Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CTEnvironmentalOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033419Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCTEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033483Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_AEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033487Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_AEnvironmentalOpen in IMG/M
3300033488Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_CEnvironmentalOpen in IMG/M
3300033489Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214EnvironmentalOpen in IMG/M
3300033493Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_AEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300034077Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.3EngineeredOpen in IMG/M
3300034149Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ga0063356_10428623223300004463Arabidopsis Thaliana RhizospherePAAPSKEDVFLHVLEIGDRDAKPARRMAGIDGHGLAGASIEDETTVLFASADDGEATLPELRTRRLLLVGLQPLASYEVQVTSGFAPGSPVWRTSAEAGGEGTLWLPWDGVRDGRLRLKRVR*
Ga0070676_1119693913300005328Miscanthus RhizosphereGAWRMETSPSEPAVEDVFLHALEVGDRDASAPRKIAAIDGHALQGAAIAGETTVLFADGEGRAGAEATLPDLDTRALLVASLEPGAPYELQVTSGPAPGAPVWRAAAEAGEQGTLLVPWTGVRDGRLRLRRLR*
Ga0070680_10059976823300005336Corn RhizosphereMAGIEGHGLAGASIEDETTVLFASADEGEATLPELRTRRLLLVGLQPLASYEVQVTSGFAPGSPAWRTSAEAGGEGTLSVPWDGVRDGRLRLKRVR*
Ga0070687_10146184213300005343Switchgrass RhizosphereGIERLSPSNRRAVVPGAWRMEVSPADPAKDDVFLHVLEIGDRDGTAARRVAAVEGHALQGAAVEGESTVLFADGEVSSAEATMPDLDTRSLLLAGVAPGAVYDLQVTSGFAPGAPVWHASAAAGDEGTLSVEWKDVRGGRLRLRRLP*
Ga0070692_1059063713300005345Corn, Switchgrass And Miscanthus RhizosphereVVPGAWRMEVSPADPAKEDVFLHVLEIGDRDGKPARRVAAIEGHVLQGAAVEGESTVLFADGEVSSAEATLPDLDTRGLLLAGVAPGAVYDLQVTSGFAPGAPVWHAIAAAGDEGTLSVEWKDVRGGRLRLRRLP*
Ga0070701_1124928513300005438Corn, Switchgrass And Miscanthus RhizosphereEVSPADPAKEDVFLHVLEIGDRDGKPARRVAAIEGHVLQGAAVEGESTVLFADGEVSSAEATLPDLDTRGLLLAGVAPGAVYDLQVTSGFAPGAPVWHAIAAAGDEGTLSVEWKDVRGGRLRLRRLP*
Ga0070700_10054564323300005441Corn, Switchgrass And Miscanthus RhizosphereAKPARRMAGIEGHGLAGASIEDATAVLFASADDGEATLPELRTRSLLLVGLEPLASYEVQVTSGFAPGSPAWRTSAEAGGEGTLSVPWDGVRDGRLRLKRVR*
Ga0070699_10153286823300005518Corn, Switchgrass And Miscanthus RhizosphereGGWRMETSPAAPSKEDVFLHVLEIGDRDAKPARRMAGIEGHGLAGASIEDETAVLFASADDGEATLPELRTRSLLLVGLEPLASYEVQVTSGFAPGSPAWRTSAEAGGEGTLSVPWDGVRDGRLRLKRVR*
Ga0079037_10030118113300006224Freshwater WetlandsIGDRGDARGLRVEAIDGHALAGAAIEGDAVVLFADGEGTDREATLPDVKTRALLLAGLGPGAPYEIQVTSGFAPGAPVWRATAEAGDEGTLSVSWDGVRDGRLRLRRLR*
Ga0075431_10223206913300006847Populus RhizosphereKEDVFLHVLEIGDRDAKPARKTGAIEGHGLAGASIEDETTVLFASADEGEATLPDVRTRRLLLVGLRPAASYEIQVTSGFAPGSPVWRASAEAGDEGTFGLPWDGVRDGRLRLKRLR*
Ga0075420_10042594713300006853Populus RhizosphereIGDRDAKPARRTAGIEGHGLAGAQIEDETTVLFASADEGEATLPDVRTRRLLLVGLRPAASYEIQVTSGFAPGSPVWRASAEAGDEGTFGLPWDGVRDGRLRLKRLR*
Ga0075429_10148718713300006880Populus RhizosphereRMEVSPAEESKEDVFLNVLEIGDRDAKPARRMEAIEGQPLTGVAVEGEAVVLFADGVTAGAEATLPDVGTRSLLVSGLDPGAAYEVQVTSGFAPGVPVWRGTAAAGEEGTLSLEWKDVRAGRLRLRRLEWSR*
Ga0105107_1046059713300009087Freshwater SedimentPATPRKEDLFLHVLEIGDRGVAGTRRASGIEGHALAGAAIEDDAVVLFVEDGVSGAEATLPDVETTSLLLTGLEPRVSYEVQVTSGFAPGAPVWRAAAEAGDESTILLPWENVRDGRLRLRRLR*
Ga0102851_1162756423300009091Freshwater WetlandsAGTKRIEAVEGHAVDGAAIEGEAVVLFADDAVTGAEATLPDMDTRSLLLAGLEPRASYEIQVTSAFAPGAPAWRATAEAGDESTILLPWDGVRDGRLRLRRLR*
Ga0102851_1303023823300009091Freshwater WetlandsSVEPTRDDVFLHVLEIGDRDATPARRVAAVDGHGLAGAAIEGEGVVLFVNATEGEATLPDVTTPTLLLAGLEPGAYYEVQVTSGFAPGAPVWRAAAEAGDEGTASLSWEAIRDGRLRLRRLR*
Ga0102851_1339917923300009091Freshwater WetlandsFLHVLEIGDRGVAGTKQVEPVEGHAVDGAAIEGEAVVLFATGDVTDAEATLPNVETRSLLLAGLEPRASYEIQVTSSFAPGAPAWRATAEAGDESTILLPWEGVRDGRLRLRRLR*
Ga0102851_1351170013300009091Freshwater WetlandsIDRLSPSNRRAVVPGGWRMETSPATAQEADVFLHVLEIGDRDARPPLRIAALEGDALDGAAIEGESVVLFANGDSASAEATLPALRTRSLLLAGLEPNAPYEVQVTSSFAPGAPAWRATAEAGDEGTLLLPWEGVRDGRLRLRRLR*
Ga0111539_1006088513300009094Populus RhizosphereSKEDVFLHVLEIGDRDAKPARRMAGIEGHGLAGASIEDETTVLFASADEGEATLPELRTRSLLLVGLEPLASYEVQVTSGFAPGSPAWRTSAEAGGEGTLSVPWDGVRDGRLRLKRVR*
Ga0111539_1327296813300009094Populus RhizosphereVLEIGDRDAKLARRIAGIEGHGFAGASIEDETTVLFASADEGEATLPDIRTRRLLLVGLQPAATYEVQITSGFAPGSPVWRASGEAGDEGTLGFPWDGVRDGRLRLKRLR*
Ga0105091_1011234623300009146Freshwater SedimentSRRVSAIEGHQLTGAAIEGQPVVLFADGRGTDGDATLPDIRTTSLLLAGLEPGAPYEIQVTSSFAPGAPVWRAAASAGEESTILLRWEDVRDGRLRLRRFR*
Ga0105091_1038929123300009146Freshwater SedimentFWEGIDRLARSNRRAVVPGAWRLETSPLTPQEEDVFLHVLAIGDRGDPGTRRVPAIEGHALTGAAIEGEAVVLFADGEGADREATLPEVKTRSLLLAGLEPGASYEVHVTSSFAPGAPAWRATAAAGDESTILVPWEDVRAGRLRLHRLN*
Ga0111538_1309068423300009156Populus RhizosphereGIERLSPSNRRAVVTGAWRMEVSPAEESKEDVFLNVLEIGDRDAKPARRMEAIEGQPLTGVAVEGEAVVLFADGVTAGAEATLPDVGTRSLLVSGLDPGAAYEVQVTSGFAPGVPVWRGTAAAGEEGTLSLEWKDVRAGRLRLRRLEWSR*
Ga0075423_1057100013300009162Populus RhizosphereGDRDAKPARRMAGIEGHGLAGASIEDETAVLFASADEGEATLPELRTRRLLLVGLQPLASYEVQVTSGFAPGSPAWRTSAEAGGEGTLSVPWDGVRDGRLRVKRVR*
Ga0113563_1097264423300009167Freshwater WetlandsGDRGDARGLRVEGIEGHALAGAAIEGDAVVLFASAGEGEATLPDVKTRSLLLAGLEPGASYEVQVTSGFAPGAPAWRGTAEAGDEGTASLSWEAVRDGRLRLRRVR*
Ga0113563_1295471623300009167Freshwater WetlandsHVFLHVLEIGDRDTRPPRRVEALEGDALDGAAIEGESVVLFADGDSASAEATLPDIRTRSLLLAGLEPNAPYEVQVTSSFAPGAPAWRATAEAGDEGTALLHWDAVRDGRLRLRRLR*
Ga0105104_1066013523300009168Freshwater SedimentCSRSAGGLRVAAIEGHGLAGAAIESDAVVLFAEGDADNREATLPDVRTPRLLITGLTPGTSYEAQVTSSFAPGAPVWRATVTATDEATALVAWADVRDGRLRLGRVR*
Ga0115028_1042077713300009179WetlandTPARWVVAIEGSGLAGAAIEGDSVVLFADGESPNREATLPDVKTRSLLLTGLEPGASYEVQVTSGLAPGAPVWRAAAEAGDEGTVSLPWEAVRDGRLRLRRLR*
Ga0131077_1011249343300009873WastewaterLPDDPYLQKMWKTFWGGEMERLARSNRRAVVPGAWRMEVQPAVSAKEDVFLNVLEIGDRDAAAPGAGTPRKVVAIEGHRLDGAAIADESVVLFADGGEGEATLPDVVTRSLLVVGLSPLASYEIQVTSSFAPGAPSWRATDVAGDEGTMWLAWDGVRNGRLRLRRLP*
Ga0134127_1285244923300010399Terrestrial SoilSNRRAVVPGAWRMETSPSEPAVEDVFLHALEVGDRDASAPRKIAAIDGHALQGAAIAGETTVLFADGEGRAGAEATLPDLDTRALLVAGLEPGAPYELQVTSGPAPGAPVWRAAAEAGEQGTLLVPWTGVRDGRLRLRRLR*
Ga0137333_105246123300011413SoilLAGAAIEGDRVVLFADGESANREATLPDVKTRSLLLAGLEPGASYEVQVTSGFAPGAPAWRGAAEGGDEGTVFLPWESVRDGRLRLRRLR*
Ga0137353_103894713300012157SoilGLAGAAIEGDRVVLFAVGESAGCEATLPDVKTRSLLLFGLEPGASYEVQVTSSFAPGAPAWRAAAEAGDEGTVSLPWESVRDGRLRLRRLR*
Ga0137350_105014913300012166SoilPARRVAAIEGSGLAGAAIEGDRVVLFADGESANREATLPDVKTRSLLLAGLEPGASYEVQVTSGFAPGAPAWRAAAEAGDEGTLSLPWESVRDGRLRLRRLR*
Ga0153915_1073563223300012931Freshwater WetlandsIEGEAVVLFADGPLTDGEATLPDVRTTSLLLTGLEPGAPYEVQVTSGFAPGAPVWRSTAEAGDESTLQLPWEGVRDGRLRLRRLR*
Ga0153915_1201989023300012931Freshwater WetlandsTPRKEDLFLHVLEIGDRGVAGTRRASAIEGHALAGAAIEGEAVVLFVEGGVADGEATLPDIKTTSLLLTGLEPGAQYEVQVTSGFAPGAPVFRTTAEAGDESTMRLPWKDVRDGRLRLRRLR*
Ga0153915_1278680713300012931Freshwater WetlandsDVFLHVLEVGDRGVAGTKRVEAVEGHAVDGAAIEGEAVVLFATGDVTDAEATLPNVETRWLLLTGLEPRRSYEIQVTSGFAPGAPVWRATAEAGDESTILLPWKGVRDGRLRLRRLR*
Ga0153916_1241348513300012964Freshwater WetlandsHVLEIGDRGATPARRVEAIEGHALAGAAIEGDAVVLFADGEGTDREATLPDVKTRALLLAGLGPGAPYEIQVTSGFAPGAPVWRATAEAGDEGTLSVSWDDVRDGRLRLRRLR*
Ga0180094_112615913300014881SoilAAPSKEDVFLHVLEIGDRDATPARRVAAIEGSGLAGAAIEGDRVVLFAEGESAGCEATLPDVKTRSLLLAGLEPGASYEVQVTSGFAPGAPAWRAAAEAGDEGTLSLPWESVRDGRLRLRRLR*
Ga0180085_110890913300015259SoilGSGLAGAAIEGDRVVLFADGESANREATLPDVRTRSLLLAGLEPGASYEVQVTSGFAPGAPAWRAAAEAGDEGTASLPWEAVRDGRLRLRRLR*
Ga0132255_10354111213300015374Arabidopsis RhizosphereRVAAIEGHDLQGAAVAGESTVLFADGDVSSAEATLPDVDTRSLLLAGLAPGVAYALQVTSSFAPGAPVWEATASAGDEGTLLLEWKNVRDGRLRLRRLR*
Ga0187785_1031879013300017947Tropical PeatlandFLHVLEIGDRDAKAARRMEGIEGHGLAGAVIEGEDAVLFADAAEGEATLPNLATRHLLLAGLVPRAAYEVQVTSGFAPGSPVWRASGETGDEGTLRLGWDGVRDGRLRLRRLR
Ga0173482_1066901223300019361SoilPSKQDVFLHVLEIGDRDAKPARRIAGIEGHGLDGASIEGEATVLFASADEGEATLPDRRTRSLLLVGLQPLASYEIQVTSGFAPGSPVWRVSSESGDEGTLSVPWDGVRDGRLRLKRLR
Ga0210380_1017352423300021082Groundwater SedimentGPLPPDPYLLRMWKTFWDGIDRLSPSNRRAVVPGAWRMEVSPATLSKGDVFLHVLEIGDRDATPARRVAAIEGSGLAGTAIEGEAVVLFANAAFGEATLPDVKTRTLLVAGLEPGGSYEIQVTSGFAPGAPVWRASAQAGDEGAFSLSWEAVRDGRLRLRRLS
Ga0210377_1006568213300021090Groundwater SedimentARRVAAIEGSGLAGAAIEGDTVVLFADGESPGREATLPDVKTRSLLLTGLEPGASYEVQVTSGFAPGAPLWRAAADAGDEGTVSLPWEAVRDGRLRLRRLR
Ga0210377_1014785023300021090Groundwater SedimentSPSNRRAVVPGAWRMEVSPATASKENVFLHVLEIGDRDAKPAARVAAIEGHGLDGAAIEGASIVLFATAEAGSAEATLPDVKTPSLLLVGLEPGAAYEVQVTSSFAPGAPVWRASGEAGDEGTLSLPWDGVRDGRLRLRRSR
Ga0209109_1051684013300025160SoilRLSPSNRRAVVPGAWRMEVSPAAASKQDVFLNVLEIGDRDAKPKARVAAIEGHGLDGAAIEGASAVLFASAEVASAEATLPDVRTESLLLVGLAPGTRYELQVTSSFAPGAPVWRATGEAGDEGTLSLPWDGVRDGRLRLQRLR
Ga0207708_1049439523300026075Corn, Switchgrass And Miscanthus RhizosphereIGDRDAKPARRMAGIEGHGLAGASIEDATAVLFASADDGEATLPELRTRSLLLVGLEPLASYEVQVTSGFAPGSPAWRTSAEAGGEGTLSVPWDGVRDGRLRLKRVR
Ga0209397_1015240713300027871WetlandVLEIGDRGDARALRVEGIEGHGLDGAAVEGDAVVLFASAGEGEATLPDVKTRSLLLAGLEPGASYEVQVTSSFAPGAPAWRAVAEAGDEGMASLSWEAVRDGRLRLRRLR
Ga0209481_1074348313300027880Populus RhizosphereEDPYLLKMWQTFWEGIERLSPSNRRAVVPGAWRMEVSPAVASKDDVFLHVLEIGDRDAKPKKHLAAIEGHGLDGAAIAGEAVVLFATPAAESAEATLPDVSTRSLLLVGLEPGAAYELQVTSGFAPGAPVFRARDTAGDEGALLLSWDGVRDGRLRLRRLP
Ga0209450_1005838913300027885Freshwater Lake SedimentTGDRGVAGMRRVLAIEGHAVDGAAIESESVVLFANGEPASAEATLPDVETRSLLLAGLEPRASYEIQVTSGLAPGAPVWRATAEAGDESTILLPWEGVRDGRLRLRRLR
Ga0209496_1009398013300027890WetlandDVFLHVLEIGDRDATSARRVAAIEGSGLAGAAIEGDSVVLFADGESANREATLPDVKTRSLLLTGLEPGASYEVQVTSGLAPGAPVWRAAAEAGDEGTVSLPWEAVRDGRLRLRRLR
(restricted) Ga0233417_1047131023300028043SedimentATPRREDVFVHVLEMEDRGVAGQRRVSPVEGHGLTGAAIEGEAVVLFADGGVTDGEATLPDVKTRSLLLCGLEPGASYDLQVTSSFAPGAPAWRATAPAGDESTALLAWEGVRDGRLRIHRLR
Ga0247826_1022690113300030336SoilHGLAGASIEDATAVLFASADDGEATLPELRTRSLLLVGLEPLASYEVQVTSGFAPGSPAWRTSAEAGGEGTLSVPWDGVRDGRLRLKRVR
Ga0307505_1066060923300031455SoilGIEGHGLAGASIEDETTVLFASADEGEATLPDVRTRRLLLVGLQPAASYEIQVTSGFAPGSPVWRASAEAGDEGTLGFPWDGVRDGRLRLKRLR
Ga0315290_1143254613300031834SedimentARRVVAIEGSGLAGAAIEGEAVVLFADGERADREATLPDVKTRSLLLAGLEPGASYEVQVTSGFAPGAPVWRATAEAGDEGALSLPWDGIRDGRLRLRRLR
Ga0310907_1016847523300031847SoilKEDVFLHVLEIGDRDAWPARRTAGIEGHGLAGASIEDEATVLFASADEGEATLPDVRTRRLLLVGLQPAAPYEIQVTSGFAPGSPVWRVSAEAGDEGTLGFPWDGVRDGRLRLKRLR
Ga0315297_1064603923300031873SedimentDVFLHVLEIGDRDGTPARRVAAIEGSGLAGAAIEGEAVVLFASAAFGEATLPDMKTRTLLLAGLEPGAPYEVQVTSGFAPGAPVWRATAEAGDESTLSLPWDGIRDGRLRLRRLR
Ga0326597_1027316233300031965SoilVPGAWRMEVSPATPSKEDVFLHVLEIGDRDAKPAARITAIEGHGLDGAAIEGAPVVLFATAEAGSAEATLPDVRTPSLLLVGLEPGTAYEVQVTSGFAPGAPVWRASGEAGDEGTLSLPWDGVRDGRLRLRRTR
Ga0315278_1161136823300031997SedimentLHVLEIGDRDGTPARRVAAIEGSGLAGAAIEGEAVVLFASAAFGEATLPDMKTRTLLLAGLEPGAPYEVQVTSGFAPGAPVWRATAEAGDESTLSLPWDGIRDGRLRLRRLR
Ga0310902_1054589523300032012SoilPAAPSKEDVFLHVLEIGDRDAKPARRMAGIEGHGLAGASIEDETAVLFASADEGEATLPELRTRRLLLVGLQPLASYEVQVTSGFAPGSPAWRTSAEAGGEGTLSVPWDGVRDGRLRLKRVR
Ga0310895_1035075013300032122SoilPARRMAGIEGHGLAGASIEDATAVLFASADDGEATLPELRTRRLLLVGLQPLASYEVQVTSGFAPGSPAWRTSAEAGGEGTLSVPWDGVRDGRLRLKRVR
Ga0315292_1028201523300032143SedimentMEVSPVAPSKEDVFLHVLEIGDRDGTPARRVAAIEGSGLAGAAIEGEAVVLFASAAFGEATLPDMKTRTLLLAGLEPGAPYEVQVTSGFAPGAPVWRATAEAGDEGALSLPWDGIRDGRLRLRRLR
Ga0315292_1138491413300032143SedimentSPVVPSKDDVFLHVLEIGDRDGTPARRVVAIEGSGLAGAAIEGEAVVLFASAAFGEATLPDVKTHTLLLAGLEPGVPYEVQVTSGFAPGAPVWRATAEAGDESTLSLPWDGIRDGRLRLRRLR
Ga0315283_1172419413300032164SedimentSKDDVFLHVLEIGDRDGTPARRVVAIEGSGLAGAAIEGEAVVLFADGERADREATLPDVKTRSLLLAGLEPGASYEVQVTSGFAPGAPVWRATAEAGDEGALSLPWDGIRDGRLRLRRLR
Ga0315283_1202744423300032164SedimentMEVSPVAPSKEDVFLHVLEIGDRDGTPARRVAAIEGSGLAGAAIEGEAVVLFASAAFGEATLPDVKTRSLLLTGLKPGASYEVQVTSGFAPGAPVWRATAEAGDESTLSLPWDAVRDGRLRLRRLR
Ga0315276_1194963413300032177SedimentPSKEDVFLHVLEIGDRDGTPARRVAAIEGSGLAGAAIEGEAVVLFASAAFGEATLPDMKTRTLLLAGLEPGAPYEVQVTSGFAPGAPVWRATAEAGDESTLSLPWDGIRDGRLRLRRLR
Ga0315276_1225180823300032177SedimentRVVAIEGSGLAGAAIEGEAVVLFASAAFGEATLPDVKTHTLLLAGLEPGFPYEVQVTSGFAPGAPVWRATAEAGDESTLSLPWDGIRDGRLRLRRLR
Ga0315286_1082339423300032342SedimentFLHVLEIGDRDATPARRVAAIEGSGLAGAAIEGEAVVLFASAAFGEATLPDVKTRTLLLAGLEPGAPYEVQVTSGFAPGAPVWRATAEAGDEEALSLPWDAVRDGRLRLRRLR
Ga0315287_1229669313300032397SedimentIGDRDGTPARRVAAIEGSGLAGAAIEGEAVVLFASAAFGEATLPDVKTRSLLLTGLKPGASYEVQVTSGFAPGAPVWRATAEAGDESTLSLPWDAVRDGRLRLRRLR
Ga0315273_1254059913300032516SedimentDPYLLKMWKTFWDGIERLSPSNRRAVVPGAWRMEVSPSAASKDDVFLNVLEIGDRDTTPARRVAAIEGNGLAGAAIDGEAVVLFANGEDAGREATLPDVKTRSLLLTGLEPGASYEVQVTSGFAPGAPVWRATAEAGGEGALSLPWDAVRDGRLRLRRLR
Ga0335085_1050795413300032770SoilGWRMEVSPATPRKEDLFLHVLEIRDRDVAGTRRVSALEGHGLTGAAIEGEAVVLFADGPLTDGEVTLPDLRTTSLLLTGLEPGAPYEVQVTSGFAPGAPIWRASAEAGDESTMWLPWKDVRDGRLRLRRLR
Ga0335070_1004094153300032829SoilLEIGDRGVAGTRRISAIEGHALTGAAIEGDAVVLFADGGLTDGEATLPDVRTASLLLTGLEPRVSYEVQVTSGFAPGAPVWRATAEAGDESTMQLPWKDVRDGRLRLRRLR
Ga0335084_1042571113300033004SoilAWGSGQNWPLDPPQGGPLPEDPRLHRMWTTFWDGIDKLSPSNRRAVVPGGWRLEVSPATPAKEDVFLHVLEIGDRDLKPPRRALGVEGRGLAGAAIEGEATVLFSDADEGEATLPDVRTRSLLLAGLAPRAAYEIQVTSGFAPGSPVWRASAEAGDEGTLWLGWDGVRDGRLRLRRLR
Ga0335084_1066158913300033004SoilSAIEGSALAGAAIEGDAVVLFVEAGAQGGEATLPDISTTSLLLTGLEPRASYEIQVTSGFAPGAPVWSATAEAGDETTMRLPWDGVRDGRLRLRRLR
Ga0316604_1050383723300033406SoilSKEDAFLNVLEIGDRGDARALRVEGIEGHGLDGAAVEGDAVVLFASAGEGEATLPDVKTRWLLLAGLEPGASYEVQVTSSFAPGAPAWRAVAESGDEGALSLPWDGVRDGRLRLRRVR
Ga0316605_1076633023300033408SoilVPSKEDVFLNVLEIGDRDATPPRPVAAIEGSGLTGAAVEGETVVLFADGVSASPEATLPDVKTRSLLLAGLEPVASYEVQVTSGFAPGAPVWRAAAETGDEGTASLPWDAIRDGRLRLRRLR
Ga0316619_1066515913300033414SoilVEPSKEDAFLNVLEIGDRGDARALRVEGIEGHGLAGAAIEGDAVVLFASAGEGEATLPDVKTRSLLVAGLEPGASYEVQVTSSFAPGAPAWRAVAESGDESTLSLPWDGIRDGRLRLRRV
Ga0316619_1205798313300033414SoilLEIGDRGVAGTKRVEAVEGHAVDGAAIEGEAVVLFATGDVTDAEATLPNVQTRSLLLAGLEPRVSYEIQVTSAFAPGAPAWRATAEAGDESTILLPWDGVRDGRLRLRRLR
Ga0316622_10000460473300033416SoilRLSPSNRRAVVPGAWRMEVSPAAPSKDDVFLHVLEIGDRDVTPARRVAAIEGHGLAGAAIEGEAVVLFASADPGEATLPDVKTPTLLLAGLEPGASYEIQVTSGFAPGAPAWRAAAEAGDEGALSLSWEAVRDGRLRLRRLH
Ga0316622_10053479413300033416SoilLAGAVIEGDATVLFADGGVTGAEATLPNVETRSLLLAGLEPGASYEVQVTSSFAPGAPAWRATAEASEEGTLLLPWEGVRDGRLRLRRLR
Ga0316622_10195912223300033416SoilQLKMWKTFWDGIDRLSPSNRRAVVPGGWRMEVAPAAPSTEDAFLNVLEIGDRDATPPRRVVAIEGAALDGAAVEGEAVVLFGSGDGRSAEATLPDVRTRALLLAGLEPGASYEVQVTSSFAPGAPAWRATAEAGDEGTALLHWDAVRDGRLRLRRLR
Ga0316622_10218280423300033416SoilIGDRGVAGTRQVSAIEGHALAGAAIEGDAAVLFADGGVADGEATLPDVRTRSLLLTGLEPRGSYEVQVTSGFAPGAPVWRATAEAGDESTILLPWEDVRDGRLRLRRLR
Ga0316622_10271712613300033416SoilDATPARRTSAIEGHALDGAAIEGEAVVLFANGDGSAEATLPDVRTRALLVAGLERGAPYEVQVTSSFAPGAPAWRTAASAGDEGTLFLPWDGVRDGRLRLRRLR
Ga0316622_10287356623300033416SoilRMEVSPVAASKEDVFLHVLEIGDRDAKPERRVEAIEGHGLAGAAIEGEAVLLFADTSRSDREATLPDVTTRSLLLTGLEPGASYEVQVTSGFAPGAPAWRATAEAGDESTILLPWEGVRDGRLRLRRLR
Ga0316625_10264008313300033418SoilVLAIQGHALAGAVIEGDATVLFADGGVAGAEATLPDVETRALLLAGLEPGASYEIQVTSSFAPGAPAWRAAAEAGEEGTLLLPWEGVRDGRLRLRRLR
Ga0316601_10026490413300033419SoilMWKTFWDGIDRLSPSNRRAVVPGGWRMEVSPSVPSKEDVFLTVLEIGDRDATPPRPVAAIEGSGLTGAAVEGDTVVLFADGVSASPEATLPDVKTRSLLLAGLEPVASYEVQVTSGFAPGAPVWRAAAETGDEGTASLPWEGVRDGRLRLRRLR
Ga0316601_10030310713300033419SoilGDRDATPARRVAAIEGHGLAGAAIEGEAVVLFASADPGEATLPDVKTPTLLLAGLEPGAPYEIQVTSGFAPGAPAWRAAAEAGDEGALSLSWEAVRDGRLRLRRLH
Ga0326726_1214944423300033433Peat SoilTSRALAIEGHALAGAAIEGEAVVLFADGGVTDAEATLPDIETTSLLLTGLEPGASYEIQVTSGFAPGAPVWRATAEAGDESTLRLPWKDVRDGRLRLRRLR
Ga0326726_1247217913300033433Peat SoilDRDARPARRVVAIEGHMLDGAAIDGETVVLFASGTAEGEATLPDVTTKGLLVAGLEPGAPYEVQVTSGAAPGAPVFRAAREAGDESTLSLPWDGIRDGRLRLRRLR
Ga0316627_10041296423300033482SoilEGHGLAGAAIEGEAVVLFASADPGEATLPDVKTPTLLLAGLEPGAPYEIQVTSGFAPGAPAWRAAAEAGDEGALSLSWEAVRDGRLRLRRLH
Ga0316627_10243140723300033482SoilIEGSGLAGAAIEGEAVVLFASAVSGEATLPDVKTRTLLLAGLEPGSSYEVQVTSSFAPGAPVWRAEVEAGDESTVSLAWEAVRDGRLRLRRLR
Ga0316629_1049203513300033483SoilAIEGHGLAGAAIEGEAVVLFASPDPGEATLPDVKTPTLLLAGLEPGASYEIQVTSGFAPGAPAWRAAAEAGDEGALSLSWEAVRDGRLRLRRLH
Ga0316624_1002437113300033486SoilDLFLHVLEIGDRGVAGTRRASAVEGHALAGAAIEGEAVVLFVEGGVSDAEATLPDIKTTSLLLTGLEPGAPYEVQVTSGFAPGAPVWRATGEAGDESTLRLTWDGVRDGRLRLRRLR
Ga0316630_1182094723300033487SoilEDVFLHVLEIGDRGSAGTRRVEAIEGHALAGAAIEGDAAVLFAGGDGADREATLPDVTTRSLLLAGLEAGASYEVQVTSGFAPGAPVWRATAEADDESTILLPWEGVRDGRLRLRRLR
Ga0316621_1054983223300033488SoilMWKTFWDGIDRLSPSNRRAVVPGGWRMEVSPSVPSKEDVFLTVLEIGDRDATPPRPVAAIEGSGLTGAAVEGDTVVLFADGVSASPEATLPDVKTRSLLLAGLEPVASYEVQVTSGFAPGAPVWRAAAETGDEGTASLPWDAIRDGRLRLRRLR
Ga0299912_1131189513300033489SoilMWKTFWDGIERLSPSNRRAVVPGAWRMEVSPATASKQDVFLNVLEIGDRDAKPKARVAAIEGHGLDGAAIEGASAVLFASADVASAEATLPDVRTESLLLVGLAPGTRYELQVTSSFAPGAPVWRATGEAGDEGTLSLPWDGVRDGRLRLQRLR
Ga0316631_1037162723300033493SoilVLEIGDRGVAGTRRASAIEGHALAGAAIEGDAVVLFVEGGVADAEATLPDIGTTSLLLAGLGPGAPYEIQVTSGFAPGAPVWRATAEAGDEGTLSLSWEDVRNGRLRLRRLR
Ga0316631_1041030213300033493SoilHVLEIGDRGVAGTKRVEAVEGHAVDGAAIEGEAVVLFATGDVTDAEATLPDVQTRSLLLAGLEPRVSYEIQVTSAFAPGAPAWRATAEAGDESTILLPWKGVRDGRLRLRRLR
Ga0316616_10299655223300033521SoilIGDRDATPARWVVAIEGSGLAGAAIEGDSVVLFADGESPNREATLPDVKTRSLLLTGLEPGASYEVQVTSGLAPGAPVWRAAAEAGDEGTVSLPWEAVRDGRLRLRRLR
Ga0373899_030921_348_6293300034077Sediment SlurryGHAVDGAAIEGEAVVLFATGDLTDAEATLPNVQTRSLLLAGLEPRVSYEIQVTSAFAPGAPAWRATAEAGDESTILLPWDGVRDGRLRLRRLR
Ga0364929_0131540_354_7343300034149SedimentMEVSPATLSKGDVFLHVLEIGDRDATPARRVAAIEGSGLAGTAIEGEAVVLFANAAFGEATLPDVKTRTLLVAGLEPGGSYEIQVTSGFAPGAPVWRASAQAGDEGAFSLSWEAVRDGRLRLRRLN

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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