NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F105402

Metagenome Family F105402

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F105402
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 69 residues
Representative Sequence MATASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG
Number of Associated Samples 52
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 72.22 %
% of genes near scaffold ends (potentially truncated) 5.00 %
% of genes from short scaffolds (< 2000 bps) 16.00 %
Associated GOLD sequencing projects 47
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (84.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Roots → Unclassified → Unclassified → Root
(36.000 % of family members)
Environment Ontology (ENVO) Unclassified
(72.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(65.000 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106
1soilH1_100026623
2Ga0065712_100331574
3Ga0068868_1020580491
4Ga0068868_1021145402
5Ga0070675_1006841801
6Ga0070674_1001782744
7Ga0070674_1007502872
8Ga0070673_1011904171
9Ga0068867_1009167222
10Ga0068856_1005214433
11Ga0068866_105670491
12Ga0068870_103401973
13Ga0097621_1007383602
14Ga0068871_1008605353
15Ga0068865_1014718092
16Ga0068865_1015508262
17Ga0105244_102405811
18Ga0105243_124560891
19Ga0105242_102644531
20Ga0105246_103136983
21Ga0105246_121154402
22Ga0157374_121653611
23Ga0182004_1000191519
24Ga0182004_100044979
25Ga0182004_1000960011
26Ga0182004_100185051
27Ga0182004_100185283
28Ga0182004_100187163
29Ga0182004_100188543
30Ga0182004_100217934
31Ga0182004_100279513
32Ga0182004_100361891
33Ga0182004_100400946
34Ga0182004_100419983
35Ga0182004_100446842
36Ga0182004_100447463
37Ga0182004_100596873
38Ga0182004_100878781
39Ga0182004_100997702
40Ga0182004_101282441
41Ga0182004_101416002
42Ga0182004_101470212
43Ga0182004_101500002
44Ga0182004_101537611
45Ga0182004_101595961
46Ga0182004_101919581
47Ga0182004_102101661
48Ga0182004_102133621
49Ga0182004_102148951
50Ga0182004_102158611
51Ga0182004_102161591
52Ga0182004_102293301
53Ga0182004_102317381
54Ga0182004_102376372
55Ga0182004_102423841
56Ga0182004_102438721
57Ga0182004_102481722
58Ga0182004_102559161
59Ga0157377_106419411
60Ga0157377_111404422
61Ga0182122_10314831
62Ga0182122_10476501
63Ga0182188_10101501
64Ga0182188_10204121
65Ga0182170_10151293
66Ga0182186_10278821
67Ga0182176_10076654
68Ga0182176_10803372
69Ga0182125_10370391
70Ga0182125_10849451
71Ga0182141_10872181
72Ga0182106_10858381
73Ga0182107_11048792
74Ga0182143_10325782
75Ga0182143_10507932
76Ga0182143_10828071
77Ga0182164_10204221
78Ga0182140_11156092
79Ga0182187_11095441
80Ga0182111_12079981
81Ga0182177_11707961
82Ga0182161_10612572
83Ga0182145_10706112
84Ga0182204_10723371
85Ga0182207_10567142
86Ga0182222_10055261
87Ga0182222_10058541
88Ga0182202_10859232
89Ga0182224_11102481
90Ga0182194_10176162
91Ga0182233_10232783
92Ga0182226_10613511
93Ga0182232_10264611
94Ga0182232_10605891
95Ga0207642_100038783
96Ga0207688_108794382
97Ga0207643_101134913
98Ga0207709_102496051
99Ga0207691_103068852
100Ga0207677_102681311
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 14.58%    Coil/Unstructured: 85.42%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

102030405060MATASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYGSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains




 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
16.0%84.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Sugarcane Root And Bulk Soil
Miscanthus Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Corn, Switchgrass And Miscanthus Rhizosphere
Miscanthus Rhizosphere
Root
Miscanthus Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Phyllosphere
Phyllosphere
Miscanthus Phyllosphere
10.0%36.0%6.0%3.0%4.0%30.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
soilH1_1000266233300003321Sugarcane Root And Bulk SoilMATASGSSASHGFSKRLRPGLPLIPCGKCHDETKIVMEYRVKKEGPNKDRIFYKCPDRNVSYFIVFNDYG*
Ga0065712_1003315743300005290Miscanthus RhizosphereMATASGSSASHGFPKRLRPGLPLIPCGKCRDETKIVMEYRVKKEGPNKDRIFYKCPDRNVSYFIVFNDYG*
Ga0068868_10205804913300005338Miscanthus RhizosphereMATASGSSVSHGFPKRLRPDLPLIPCGKCRDETKIVMEYRVKKEGPNKGHIFYKCPDRNVSYFIVFYDYG*
Ga0068868_10211454023300005338Miscanthus RhizosphereMATASGSSASHGFPKRLRPGLPLIACGKCCDETKIVMEYRVKKEGPNKGRIFYKCPDRNVSYFIVFNDYG*
Ga0070675_10068418013300005354Miscanthus RhizosphereMTTASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG*
Ga0070674_10017827443300005356Miscanthus RhizosphereMTTASGSSASHGFPKRLRPGLPLIPCGKCRDETKIVMEYRVKKEGPNKDRIFYKCPDRNVSYFIVFNDYG*
Ga0070674_10075028723300005356Miscanthus RhizosphereMATASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG*
Ga0070673_10119041713300005364Switchgrass RhizosphereMATASRSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG*
Ga0068867_10091672223300005459Miscanthus RhizosphereMATASGSSASHRVPKRLRPDLPLIACSKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFIAFDDYG*
Ga0068856_10052144333300005614Corn RhizosphereMATASGSSASHGFPKRLRPGLPLIPCGKCCDETKIVMEYRVKKEGPNKDRIFYKCPDRNVSYFIVFNDYG*
Ga0068866_1056704913300005718Miscanthus RhizosphereMATASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCLDRNVSYFVAFDDYG*
Ga0068870_1034019733300005840Miscanthus RhizosphereMVTASGSSASHGFPKRLRPGLPLIACGKCCDETKIVMEYRVKKEGPNKGRIFYKCPDRNVSYFIVFNDYG*
Ga0097621_10073836023300006237Miscanthus RhizosphereMATASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYQVRKECPNKGRIFYKCPDRNVSYFVAFDDYG*
Ga0068871_10086053533300006358Miscanthus RhizosphereGSSASHGFPKRLRPGLPLIACGKCCDETKIVIEYRVKKEGPNKGRIFYKCPDRNVSYFIVFNDYG*
Ga0068865_10147180923300006881Miscanthus RhizosphereMATAFGSSASHGFPKRLRPGLPLIPYGKCRDETKIVMEYRVKKEGPNKDRIFYKCPDRN
Ga0068865_10155082623300006881Miscanthus RhizosphereMATASGSSASHRVTKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG*
Ga0105244_1024058113300009036Miscanthus RhizosphereMATASGSSASHGFPKRLRPGLPLIPCGKCRDEMKIVMEYRVKKEGPNKNRIFYKCPDRNVSYFIVFNDYG*
Ga0105243_1245608913300009148Miscanthus RhizosphereKRLRPGLPLIPCGKCRDETKIVMEYRVKKEGPNKDRIFYKCPDRNVSYFIVFNDYG*
Ga0105242_1026445313300009176Miscanthus RhizosphereMATASGSSASHRVPKRLRPDLPLIACGKCEEKIVIEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG*
Ga0105246_1031369833300011119Miscanthus RhizosphereMATVSGSSASHGFPKRLRPGLPLIPCGKCRDETKIVMEYRVKKEGPNKDRIFYKCPDRNVSYFIVFNDYG*
Ga0105246_1211544023300011119Miscanthus RhizosphereMSTASGSSTSHGFPKRLRSGLPLIACGKCCDETKIVMEYRVKKEGPNKGRIFYKCPDRNVSYFIVFNDYG*
Ga0157374_1216536113300013296Miscanthus RhizosphereMITASGSLASHGFPKRLRPGLPLIACGKCCDETKIVMEYRVKEGPNKGRIFYKCSDRNVSYFIVFNDYG*
Ga0182004_10001915193300014486RootMTVSSDSSASHRVGNRMRPDLPLIACGECEENIVMEYRVKECPNKDRIFYKCPARNVSYFITFNDYG*
Ga0182004_1000449793300014486RootMTTVSGSLASHRVQKRMRSDLPLIACGEYQQNIMMEYRVKKECPNKGRIFYKCSDRNVSYFIIFDGYG*
Ga0182004_10009600113300014486RootMATTYASSASPGFSKRLRPGLPLIPCGKCDDEMKIVMEYRVKKEGPNKDRIFYKCPDCNMSYLLFDNYD*
Ga0182004_1001850513300014486RootMETTSASSASPGFSKRLRPGLPLIPCGKCDDETKIVMEYRLKKEGRNKGCIFYKCPDRNVSNLLAFDNYD*
Ga0182004_1001852833300014486RootMAAASDSSASHRVQKRMRLDLPFIAWGEYQRNIMKEYRVKKECPNKGRIFYKCLDRNLGYFIT*
Ga0182004_1001871633300014486RootMATTSASSASHGFSKRLRPGLPLIPCSKCDDEMKIVMEYRVKKEGPNKGRIFYKSPNCNVSYLLAFDNYN*
Ga0182004_1001885433300014486RootMTTASASSASHGFPKWLKSGLPLIPCGKCDDETKIVMEYQVKKEGPNKGHIFYKFPVRNVSYFLVFDDYG*
Ga0182004_1002179343300014486RootMATVTGSSVSQRVQKRHRPELPLIACGQCGQKMMEYKVSKEGVNKGCIFYKCLDRNVSYFQKFAYICAYFFNDVT*
Ga0182004_1002795133300014486RootMATLIGSSVSQRVQKRYRSELPLITCGKCGQKIVMEYKVSKDGVNKGRIFYRCLDCNVSYFQTFAYICAYFFNDIN*
Ga0182004_1003618913300014486RootMTTVTGSSVSQRVQKRYWPKLALITCGKCGQKIVMEYKVSKEGVNKGRIFYKCSDRNMSYFHTFAYICAYFFNDIN*
Ga0182004_1004009463300014486RootMATTSASSVSHGFPKRLRPGLPLIPCDKCDDEMKIVIEHRVKKEGPKKGLSSTSAQIAM*
Ga0182004_1004199833300014486RootMATVTWSSVSQQVQKRYRPEFPLITCGKCGQKIVMEYKVSKEGVNNGRIFYKCLDRNVSYFHTFAYICAYFF*
Ga0182004_1004468423300014486RootMATVTGSSVSQRVQKRYQPELLLITSGKCGQKIVMEYKVSKEGVNKGRIFYKCLDRNVSYFQTFPYICAYFFNDII*
Ga0182004_1004474633300014486RootMTGSSVSQRVQKRYWPELPLVTCGKCGQKIVMEYKVLKEGVIKGRIFYKCPDRNVSYF*
Ga0182004_1005968733300014486RootMATVTGSSVSQRVQKRYRPELPLITCSKCGQKIMMEYKVSKEEVNKGRIFYKCPDHNVSYFQTFAYICAYFFNDIT*
Ga0182004_1008787813300014486RootMATVTGSSVSQRVQKRYRPELPLITYGKCGQKIVMEYKVSKKGVNKGHIFYKCPDHNVSYFQTFSYICAYFFNDIN*
Ga0182004_1009977023300014486RootMATVIGSSVSQRVQKPYRPELPLITCGKCGQNIVMEYKVSKEGVNKGRIFYKCLDRNVNYFQTFAYICAYFFNDIN*
Ga0182004_1012824413300014486RootMATVTGSSVSQRVQKRYRPKLPLITCGKCGQKIVMEYKVSKEGVNKGRIFYKCLDRHLLIYVLIF*
Ga0182004_1014160023300014486RootMATMTGSSVSQRVPKQYQPELPLITCGKCGQNIVMEYKVSKERVNKGRIFYKYPDRNVSYFETFAYICTYFFNGVT*
Ga0182004_1014702123300014486RootMPTVTGSSVSQRVQKRYQPELPLITCGKCGQKIMMEYKVSKEGVNKGCIFYKCPDRNMSYFQTFAYICAYFFK*
Ga0182004_1015000023300014486RootMATVTGSSVSQRVQKRYRLELPLITCGKCGQKIVMEYKVSKERVNKGRIFYKCPDRNLSYFQTFAYICAYFFNGIN*
Ga0182004_1015376113300014486RootTVTGSSVSQRVQKRYRPELPLITCGKCGQKIVMEYKVSKEGINKGRIFYKCLDRNVSYFQTFSYICAYFFNDIN*
Ga0182004_1015959613300014486RootMATVTGSSVSQRVQKRKRPELHIITCGKCGQKIVMEYKVSKEGVNKGRIFYKCLDRNVSYFQIFAYICAYFNDIN*
Ga0182004_1019195813300014486RootMATVTGSSVCQRVQKRYRPELPLITCGKCGQKIVMEYKVSKEGVNKGRIFYKCSDRNVSYFQTFAYICAYFFK*
Ga0182004_1021016613300014486RootMATVTGSSVSQRVQKRYRLELPLITCGKCGQKIVMEYKVSKEGLNKGRIFNKCLDCNVSYFLTFAYICAFFNEIN*
Ga0182004_1021336213300014486RootTGSSVSQRVQKRYRPELPLITCGKCGQKILMEYKVSKEGVKKGRIFYKCPDRNVSYFQTFAYICAYFFK*
Ga0182004_1021489513300014486RootMATVTGSSVSQWVQKRYWPELPLITCGKCGQKIVMEYKVSKERVNNGRIFYKCPDRNVSFFQTFAYICAYFFK*
Ga0182004_1021586113300014486RootMATVTGSSVSQRVQKRYQPELPLITCGKCGQKIVMEYKVSKEGVNKGRIFYK*SDRNVSYFQTFAYICAYFLNDIN*
Ga0182004_1021615913300014486RootMATVTGFSVSQRVQKRYRSELPLITCGKCGHKIVMEYKVSKEGVNKGRIFYNYPDRNVSYFQIFAYIYAYFFK*
Ga0182004_1022933013300014486RootMATVNGSSVSQRVQKRYRPELPLITCGKCGQKILMEYNVSKEGVNKGRILYKCPDRNVSYFQTFAYICAYFLNDIN*
Ga0182004_1023173813300014486RootMATVTGSSVSQRVQKRYQPELPLITCGKCGQKIMMEYRVSKEGVNKGRIFYKCSDRNVSYFHTFAYICTYFFNDIN*
Ga0182004_1023763723300014486RootMATVTGSSVSQPVQKRYQPELPLITCGKCGQKIVMEYRVLKEGVNKGCPDRNVSYFQIFSYICAYFFNDIN*
Ga0182004_1024238413300014486RootMATVTGSSVSQRSQKRYRSQLPPITCGKCGQKIVMEYKVSKEGVNKGRIFYKCPDRNVSYFLAFAYICCLYMCSFFNNIN*
Ga0182004_1024387213300014486RootMATVTGSSVSQRVQKRYRPELSLITCGKCGQNILMEYKVSKEGVNKGRIFYKCLDRNVNYFQTFAYICVYFFK*
Ga0182004_1024817223300014486RootMATVIGSSVSQRVQKRYQPELPLITCGKCGQKIVMEYKVSKERVNKGRIFYKCPDRNVSYFQIFAYICAYFIK*
Ga0182004_1025591613300014486RootMATVTGSSVSQRVQKRYRSELPLITCGKCGQKIVIEYKVSKEGVNKGRIFYKCSDRNLSYFLTFAYICAYFLIILIKLLILSFYF*
Ga0157377_1064194113300014745Miscanthus RhizosphereMATASGSSASHGFPKRLRPGLPLIPCGKCRDETKIVMEYRVKKVGPNKDRIFYKCPDRNVSYFIVFNDYG*
Ga0157377_1114044223300014745Miscanthus RhizosphereMATAFGSSASHGFPKRLRPGLPLIACGKCCDETKIVMEYQVKKEGPNKGRIFYKCPDRNVSYFIVFNDYG*
Ga0182122_103148313300015267Miscanthus PhyllosphereMATAFGSSASHRVTKQLRPDLPLIAWGKCEEKIVMEYRVRKVCPNKGRIFYKCPHRNVSYFVAFDDY
Ga0182122_104765013300015267Miscanthus PhyllosphereMATASGSSASHGFPKRLRPGLPLIACGKCCDETKIVMEYRVKEGPNKGRIFYKCPNRNVSYFIIFNDYG*
Ga0182188_101015013300015274Miscanthus PhyllosphereMTTVFGSSASHRAPKRLRPDLPLIACGKCEEKIVLEYQVRKECPNKGRIFYKCLDRNVSYFVEFDDYG*
Ga0182188_102041213300015274Miscanthus PhyllosphereMATASGSSASHRVTKRLRPDLPLIACGKCEEKIVIEYRVRKECPNKGRIFYKCPDRNVSY
Ga0182170_101512933300015276Miscanthus PhyllosphereASHGFPKRLRPGLPLIACGKCCDETKIVMEYRVKKEGPNKGRIFYKCPDRNVSYFIVFNDYG*
Ga0182186_102788213300015285Miscanthus PhyllosphereMATASGSSTSHRVPKRLRPDLPLIACDKCEEKIVMEYRVRKKCHNKGRIFYKCSDRNMSYFVVFDDYG*
Ga0182176_100766543300015286Miscanthus PhyllosphereMATASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCSDRNVSYFVVFDDYG*
Ga0182176_108033723300015286Miscanthus PhyllosphereSHGFPKRLRPGLPLIPCGKCRDETKIVMEYRVKKEGPNKDHIFYKCSDRNVSYFIVFNDYG*
Ga0182125_103703913300015291Miscanthus PhyllosphereMATASGFSASHGVPQRLRPDLPLIACGECEQKIVSKDRVKKEGPNKGHIFYKCPDHN
Ga0182125_108494513300015291Miscanthus PhyllosphereMATASGSSASHGVPKRLRPGLPLIPCGKCHDETKIVMEYRVKKEGPNKSRIFYKCPDRNVSYFIVFNDYG*
Ga0182141_108721813300015292Miscanthus PhyllosphereMATASGSSASHGFPKRLRSGLPLIACGKCCDETKIVMEYRVKEGPNKGRIFYKCPDHNMSYFIVFNDYG*
Ga0182106_108583813300015298Miscanthus PhyllosphereMVTASGSSASDRVPRRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG*
Ga0182107_110487923300015299Miscanthus PhyllosphereMATTSGSSASHGLPERLRPDLPLIACGKCEEKIVMEYRVRKECPNKDRIFYRCLDLNVSYFVAFDDYG*
Ga0182143_103257823300015302Miscanthus PhyllosphereMATASGSSASHRVLKRLRPDLPLIARGKCEEKIVMEYRVRKECPNKGRMFYKCPDRNVSYFVAFDDYG*
Ga0182143_105079323300015302Miscanthus PhyllosphereMATASGSSVSHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG*
Ga0182143_108280713300015302Miscanthus PhyllosphereMATASGSSASHGFPKRLRPGLPLIACGKCCDETKIVMEYRVKKEGPNKGRIFYK
Ga0182164_102042213300015313Switchgrass PhyllosphereMATASGSSASHGFPKRLRPGLPLIPCGKCRDETKIVMEYRVKKEGPNKGHIFYKCPDHNVSYFIVFNDY
Ga0182140_111560923300015314Miscanthus PhyllosphereMATASGPSASHGFPKRLRPGLPLIACGKCCDETKIVMEYRVKKEGPNKGRIFYKCLDRNVSFFIVFNDYG*
Ga0182187_110954413300015341Miscanthus PhyllosphereTASGSSASHWVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCLDHNVSYFVAFDDYG*
Ga0182111_120799813300015345Miscanthus PhyllosphereMATASGSSVSHGFPKRLRPGLPLIACDKCCDETKIVTEYRVKNEGPNKGRIFYKCPDRNVSYFIVFNDYG*
Ga0182177_117079613300015347Miscanthus PhyllosphereMETASGSSASHGVPKRLRPDLPLIACDKCGQKTVLEYRVKKKGPNQGRIFYICLDHNVSYYFCHVL*
Ga0182161_106125723300015351Miscanthus PhyllosphereMATASGSSASHRVPKRLRPDLPLIACGECEQKIVLEYRVKKEGPNKGRIFYRCLDRNVSSFGHVVFYGL*
Ga0182145_107061123300015361Miscanthus PhyllosphereMATAFGSSASHRVTKRLRPDLPLITCGKCEEKIVMEYRVTKECPNKGRIFYKCPNRNVSYFVAFDDYG*
Ga0182204_107233713300017409Miscanthus PhyllosphereMATASGSATSHGFPKRLRPGLPLIPCGKCHDETKIVMAYRGKKEGPNKG
Ga0182207_105671423300017410Miscanthus PhyllosphereMATASGSSASHRVTKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG
Ga0182222_100552613300017413Miscanthus PhyllosphereMSTASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG
Ga0182222_100585413300017413Miscanthus PhyllosphereMATASGSSASHGFPKRLRPGLSLIACGKCCDETKIVMEYRVKKEGPNKGRIFYKCPDRNVSYFIVFNDYG
Ga0182202_108592323300017415Miscanthus PhyllosphereMATASGSSASHGFSKRLRPGLPLIACGKCCDETKIVMEYRVKKEGPNKGRIFYKCPDRNVSYFIVFNDYG
Ga0182224_111024813300017425Miscanthus PhyllosphereMVTAFGSSPSHGVPKRLRPDHPLIACGECKQKTVLKYKVMQQCPNHGRVFYKCMDRIVSSFGHVFFMLYSLFYDFN
Ga0182194_101761623300017435Switchgrass PhyllosphereMTTASGSSASHGFPKRLPLIPCGKCRDETKIVMEYRVKKEGPNKDRIFYKCPDCNVSYFIVFNDYG
Ga0182233_102327833300017680Miscanthus PhyllosphereMTTASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKEYPNKGRIFYKCPDRNVSYFVAFDDYG
Ga0182226_106135113300017681Miscanthus PhyllosphereMATASGSSASHRVTKRLRPDLPLIACGKCEEKIVMEYWVRKECPNKGRIFYKCPDHNVSYFVAFDDYG
Ga0182232_102646113300021060PhyllosphereMATASGSSASHGFPKRLRPGLPLIPCGKCRDETKIVMEYRVKKEGPNKDRIFYKCPDRNVSYF
Ga0182232_106058913300021060PhyllosphereMATASGSSASHGFPKRLRPGLPLIACGKCCDETKIVMEYRVKKEGPNKGRIFYKCPDRNVSYFIVFNDYG
Ga0207642_1000387833300025899Miscanthus RhizosphereMATASGSSASHGFPKRLRPGLPLIPCGKCRDETKIVMEYRVKKEGPNKDRIFYKCPDRNVSYFIVFNDYG
Ga0207688_1087943823300025901Corn, Switchgrass And Miscanthus RhizosphereMTTASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG
Ga0207643_1011349133300025908Miscanthus RhizosphereMATASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG
Ga0207709_1024960513300025935Miscanthus RhizosphereKMRNLHYIKNEYREYMSTASGSSASHRVPKRLRPDLPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG
Ga0207691_1030688523300025940Miscanthus RhizosphereMATASGSSASHRVPKRLRPDVPLIACGKCEEKIVMEYRVRKECPNKGRIFYKCPDRNVSYFVAFDDYG
Ga0207677_1026813113300026023Miscanthus RhizosphereMATASGSSASHGFPKRLRPGLPLIPCGKCRDETKIVMEYRVKKEGPNKDRIFYKCPDRNV


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.