Basic Information | |
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Family ID | F105320 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 100 |
Average Sequence Length | 53 residues |
Representative Sequence | MREVLGAGRGVQAGEVETPAMAAEAGRETRRGAESDEESDGCDGAQDSARVRVRNTY |
Number of Associated Samples | 48 |
Number of Associated Scaffolds | 100 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 0.00 % |
% of genes from short scaffolds (< 2000 bps) | 0.00 % |
Associated GOLD sequencing projects | 48 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.16 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (100.000 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (48.000 % of family members) |
Environment Ontology (ENVO) | Unclassified (86.000 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Unclassified (65.000 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.16 |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Marine Seawater Seawater Freshwater To Marine Saline Gradient Marine Estuary Water Seawater Estuarine Marine Marine Seawater Seawater |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0066610_102583362 | 3300004276 | Marine | RGKCEEAMREVLGAGRGVQAGEVEIPAMAAEAGRETRQGAESDEESDGAQDCERVRVRNTTC* |
Ga0066609_101527531 | 3300004278 | Marine | MREVLGPGRGVQAGEVEILAMAAEAGRETRQGAESDEESDGCDGAQDCERVRVRNTTY* |
Ga0066609_102315991 | 3300004278 | Marine | MREVLGAGRGVQAGEVEIPAMAAEAGRETRQGAESDEESDGCDGAQDCERVRVRNTTY* |
Ga0066609_102597031 | 3300004278 | Marine | AGEVETPAMAAEAGRETRRGAESDEESDGCNEAQDSARVHVRVRNTH* |
Ga0066609_102628792 | 3300004278 | Marine | MREVLGAGRGVQAGEVETPAMAAGARRATRQGAEGDEEGDGGDGAHDSERV* |
Ga0075448_101631222 | 3300006352 | Marine | MREVLGAGRGVQAGEVETPAMAAEAGRETRRGEESDEESDGCNEAQDSARVRVRNTH* |
Ga0102827_10389482 | 3300007715 | Estuarine | MREVLGAGRGVQAGEVETPAMAAEARRETRRGAETDEESDGCNEAQDSARVHVRVRNTSYILSRKAIPV |
Ga0102852_11357941 | 3300007718 | Estuarine | MREVLGAGRGVQAGEVEIPAMAAEAGRETRQGAASDEESDGCDGAQDCNCNCN* |
Ga0105744_11250461 | 3300007863 | Estuary Water | MREVLGAGRGVQAGEVEIPAMAAEAGRETRQGAASDEESDGCDGAQDRNTLRALE* |
Ga0114995_103771602 | 3300009172 | Marine | MREVLGVGRGVQAGEVETPAMAAEAGPETRRGAESDEESDGCNEAQDSARVHHVRVRNTY |
Ga0114994_108959451 | 3300009420 | Marine | AGRGVQAGEVEIPAMAAEAGRETRQGAESDEESDGCDGAQDCNTTY* |
Ga0114998_101342782 | 3300009422 | Marine | MREVLGAGRGVQAGEVEIPAMAAEAGRETRQGAASDEESDGCDGAQDCNTTY* |
Ga0114998_105613722 | 3300009422 | Marine | VQAGEVEIPAMAAEAGIATRQGAESDEERDGCDGAQDCERVRG |
Ga0115005_108316472 | 3300009432 | Marine | MRIEVLGAGRGVQAGEVEIPAMAAEAGRETRQGAESDEESDGCDGAQDCERVWVRNTTY* |
Ga0115008_103818331 | 3300009436 | Marine | LAAGHAGSVRRREVLGAGRGVQAGEVEVPAMAAEAGRETRRGAESDEESDGCDGAQDCERVRVHNTTY* |
Ga0115008_111514161 | 3300009436 | Marine | GAGRGVQAGEVETPAMAAGARRETRRGAEGDEEDDGGDGVRLHLS* |
Ga0115007_105492781 | 3300009441 | Marine | MREVLGTGRGVQAGEVEIPAMAAEAGRETRQGAESDEESDGCDGAQDCERVRLWVRNTTY |
Ga0115006_110794631 | 3300009544 | Marine | MREVLGAGRGVQAGEVEIPAMAAEAGRETRQGAESDEESDGCDGAQDCNTTY* |
Ga0115000_110177741 | 3300009705 | Marine | MYLSETPAMAAEAGRETRRGAESDEESDGCNEAQDSARVHHVRV |
Ga0115001_106243262 | 3300009785 | Marine | VRGKCKEAMTEVLGAGRGVQAGEVEIPAMAAEAGRETRQGAESDEESDGCDGAQDCERVRVRNTTY* |
Ga0114999_107215452 | 3300009786 | Marine | MREVVGAGRGVQAGAVETPAMAAEAGRETRRGEESDEESDGCNEAQDSARVRVRNTY* |
Ga0133547_101061844 | 3300010883 | Marine | WVRGKCEEAMREVLGAGRGVQAGEVEIPAMAAEAGSETRQGAASDVESDGCDGAQDCNTTY* |
Ga0133547_107120761 | 3300010883 | Marine | MREVLGAGRGVQEAGEVEIPAMAAEAGRETRQGAASDEESDGCDGAQDCNTTY |
Ga0133547_113360841 | 3300010883 | Marine | GEVEVPAMAAEAGRETRRGAESDEESDGCDGAQDCERVRVRNATY* |
Ga0133547_113666361 | 3300010883 | Marine | MCYSYNTPFSVFREVLGAGRGGQAVEVEIPAMAAEAGRETRQGAESNEESDGCDGAQDCERVRV |
Ga0133547_120376283 | 3300010883 | Marine | GAGRGVQAGEVEIPAMAAEAGRETRQGAESDEESDGCDGAHDCNTTH* |
Ga0129327_104404352 | 3300013010 | Freshwater To Marine Saline Gradient | MREVLGAGRGVQAGEVEIPAMAAEAGRETRQGAASDEESDGCDGAQDRNTTY* |
Ga0134299_10455731 | 3300014959 | Marine | GKCEEAMREVLGAGRGVQAGEVEIPAMAAEAGRETRQGAASDEESDGCDGAQDCNTTY* |
Ga0181430_11480621 | 3300017772 | Seawater | VQAGEVEIPAMAAEAGRETRRGAESDEESDGCNEAQDSARVHVRVRNTH |
Ga0206127_11608871 | 3300020169 | Seawater | MREVVGAGRGVQAGDVETPAMAAEAGRETRRGAESDEESDGCDGAQDSARVRIRNAY |
Ga0206126_102996022 | 3300020595 | Seawater | GPEQGCHCLCEEAMREVLGAGRGVQEAGEVEIRIPAMAAEAGRETRQGVASDEESDGCDGAQDCNTTY |
Ga0206126_103058831 | 3300020595 | Seawater | VRGKCEEAMREVLGAGRGVQAGEVEIPAMAAEAGSETRQGAASDEESDGCDGAQDCNTTY |
Ga0206126_103716691 | 3300020595 | Seawater | MREVLGAGRGVQAGEVEIPAMAAEAGRETRQGAASDEESDGCDGAQDCNTT |
Ga0206126_105165471 | 3300020595 | Seawater | MREVLGAGRGVQAGEVEIHVRIPAMSAEAGRETRQGAESDEESDGCDGAQDCY |
(restricted) Ga0233426_103964091 | 3300022920 | Seawater | MREVLGAGRGVQAGEVEIPAMAAEAGRETRQGAERDEESDGCDGAQDCERVRVRNTT |
Ga0308021_100047172 | 3300031141 | Marine | MRRVLAAGRGVQAGEVETPAMAAEARRETRVEAEGNEEGVGADREQVQDSEHV |
Ga0308021_100093222 | 3300031141 | Marine | VETPAMAAEAGRETRRGAESDEESDGCNGAQDSARVRVRNTY |
Ga0308021_100138351 | 3300031141 | Marine | MRELLGAGRGVQAGEVETPAMAAEARIETRLGAEGDEEGDGGDGAQDSERVRFSNTY |
Ga0308021_100163661 | 3300031141 | Marine | AGRGVQAGEVEAPAMVAEARRARKSEEEGGGGDGAQDSERVRNT |
Ga0308021_100258692 | 3300031141 | Marine | MREVLGAGRGAQAGEVETPAMAAEARRETRLGAEGDEEGDGGDGVRIQDSERVWLQP |
Ga0308021_100437265 | 3300031141 | Marine | MREVLGAGRGVQAGEVETPAMTAEAGRETRRGAESDEESDGCDGAQDSARVRIRNTY |
Ga0308021_100501503 | 3300031141 | Marine | GAGRGVQAGEVETPAMAAEAGRETRRGAESDEESDGCNEAQDSARVRVRNTY |
Ga0308021_100605881 | 3300031141 | Marine | MREALGAGRGVQAGEVETPAMTAEARRETRLGAEGDEEGDGGDGAQDSERVG |
Ga0308021_100742781 | 3300031141 | Marine | AGRGVQAGEVETPAMAAEAGRETRRGAESDEESDGCDGAQYSARVRVRNTY |
Ga0308021_100771133 | 3300031141 | Marine | MREVLGAGRGVQAGEVETPAMAAEAGRETRRGAESDEESDGCDGAQDSERV |
Ga0308021_100917501 | 3300031141 | Marine | MREGLGAGRGVQAGEVETPAMAAEAGRETRRGAESDEESDGCDGA |
Ga0308021_101191282 | 3300031141 | Marine | MREVLGAGRGVHAGEVETPAMAAEAGRETRRGAESDEESDGCNGAQD |
Ga0308021_101418911 | 3300031141 | Marine | EVETPAMAAEAGRETRRGAESDEESDGCNEAQDMRSARVRVRNTY |
Ga0308021_101890802 | 3300031141 | Marine | VQAGEVETPAMAAEAGREMRREAESDKESDGCNGAQDSARVRVRNTY |
Ga0308021_101915382 | 3300031141 | Marine | MREVLGAGQGVQAGEVETPAMAAEAGRETRRGAESDEESDGGNEAQDSARVRVRNTY |
Ga0308021_102211361 | 3300031141 | Marine | MREVLGAGRGVQAGEVETPAMAAEAGRETRRGAESDEESDGCNGAQDSARVRVRNTHTLRLSRKA |
Ga0308021_102403681 | 3300031141 | Marine | VQAGEVEIPAMAAEARRETRQGAGSDEEGDGGDGAQDSERGYMYATHTKPQGFIPR |
Ga0308021_102876992 | 3300031141 | Marine | MREVLGAGRGVQAGEVETPAMVAEARRARKSEEEGGGGDGAQDSERVRNT |
Ga0308021_102939282 | 3300031141 | Marine | LGAGRGVQTGEVDTPAMAAEARRETRQGAEGDEEGDGGDGAHDSERV |
Ga0308021_102977962 | 3300031141 | Marine | MREVLGAGRGVQAGEVETPAMAAEAGRETRRGAESDEESDRCDGAQD |
Ga0308021_103076361 | 3300031141 | Marine | MREVLRAGRGVRAGEVETPAMAAEARRETRRGAESDEEGDGGDGAQDSERVR |
Ga0308021_103332521 | 3300031141 | Marine | VQAGEVETPAMAAEAGRETRRGAESDEESDGCDGAQDSERVRVRNTY |
Ga0302131_12638901 | 3300031594 | Marine | MREVLGAGRGVQAGEVETPAMAAEAGRETRRGAERDEESDGCNEAQDSARVHVRVRNTH |
Ga0308009_101237181 | 3300031612 | Marine | GGRGVQAGEVETAMAAEVRKGLGAEGDEEGDGGDGSQDSERVCRRIKRNTY |
Ga0308009_102517692 | 3300031612 | Marine | MRVVLGAGRGVQAGEVETPAMAAEARRETRLGAEGDEEGDGCDGVQDDSERVGLRNTY |
Ga0308009_102887831 | 3300031612 | Marine | MREVFGAGRSVQAGEVETPAMAAEARREARRGAESDEEGDGGDGAQDSARVRVRNTY |
Ga0308009_102977171 | 3300031612 | Marine | MREVLGAGRGVQAGEVETPAMAAEAGRETRRGAESDEESDGCNEAQDSARVRVRNTY |
Ga0308009_103328311 | 3300031612 | Marine | EVETPVMAAEARRETRRGAESDEESDGCDGAQDSARVRVRSTSHNT |
Ga0302126_101083342 | 3300031622 | Marine | GVQAGEVEIPAMAAEAGRETRQGAESDEESDGCDGAQDCERVRVRNTTY |
Ga0302126_103218001 | 3300031622 | Marine | MREVLGAGRGVQAGEVEVPAMAAEAGRETRRGAESDEESDGCD |
Ga0307985_101622331 | 3300031629 | Marine | VQAGEVETPAMAAEVRRETRRGSEGDEEGDGGDGAQDTER |
Ga0307985_103246032 | 3300031629 | Marine | MRELLGAGRGEQAGKVERPAMAAEERRETRQAGAEGDEEGDGGDRAHDSERK |
Ga0307985_103272921 | 3300031629 | Marine | MREVLGAGRGVQAGEVEIPAMAAEAGRETRQGAASDEESDGCDGAQDCNTTY |
Ga0308012_101558471 | 3300031647 | Marine | RGVQAGEVETPAMAAEAGRETRRGAESDEESDGCDGAQDSERVGLRNAY |
Ga0308012_102160671 | 3300031647 | Marine | VYSEEAMREVLGAGRGVQASEVETPAMAAESRRETRQGAKGDEEGDGGDGAQDSERAGLRNTN |
Ga0308018_100440232 | 3300031655 | Marine | MREVLGAGRGVQAGEVETPAMAAEAGRETRRGAESDEESDGCDGAQDSARVRVRNTY |
Ga0308018_101158072 | 3300031655 | Marine | TMKEVLGAGRGVQAGEVETPAMAAEAGRETRRGAESDEESDGCDGAQDSERVRVRNTY |
Ga0308018_101710771 | 3300031655 | Marine | GAGRGVQAGEVETPAMAAEAGRETRRGEESDEESDGCNEAQDSARVRVRNTH |
Ga0308018_102681111 | 3300031655 | Marine | MAAEARKETRRGAEGDEEGDEEGDGGDGAQDSERVGLRNTYIQAYIRV |
Ga0308018_102695911 | 3300031655 | Marine | VLGAGRGVQAGEVESPAMAAEAGRETRWGAESDEESDGCDGAQDSERVRVRLRNTYAGGG |
Ga0308006_100801722 | 3300031683 | Marine | MREVLRAGRGVRLGEVETPAMAAEARRETRRGAESDEEGDGGDGAQDSERVR |
Ga0308006_101715222 | 3300031683 | Marine | MRDERGVGAGRGVQAGEAETPAMVAEARRETKWGAESDEDEEGDGGDGAQAQDSERVWV |
Ga0308015_100329701 | 3300031694 | Marine | EAMRELLGAGRGVQAGEVETPAMAAEARIETRLGAEGDEEGDGGDGAQDSERVRFSNTY |
Ga0308015_101368541 | 3300031694 | Marine | GKCEEAMREVLGAGRGVQAGEVETPPMAAVARRETRLGAEGDEEGEGGDSERV |
Ga0308015_102148192 | 3300031694 | Marine | MREVLGAGRGVQAGEVESPAMAAEAGRETRWGAESDEESDGCDGAQDSERVRVR |
Ga0308015_103111221 | 3300031694 | Marine | VQAGEVETPAMAAEAGRETRRGAESDEESDGCNGAQDSARVRVRNTYIYIKT |
Ga0308015_104565971 | 3300031694 | Marine | GAGRGVQAGEVETPAMAAEAGRETRRGAESDEESDGCDGAQDSARVRVRNIY |
Ga0308003_11503222 | 3300031705 | Marine | MRRVLAAGRGVQAGEVETPAMAAEARRETRLEAEGNEEGVGADREQVQDSESTYKRFT |
Ga0307997_100682592 | 3300031706 | Marine | MRELLGAGRGVQAGEVETPAMAAEARIETRLGAEGDEEGDGGDGAQ |
Ga0308000_101093961 | 3300031848 | Marine | MREVLGAGRGVQAGEVETPAMVAEARRETKWGAESDEDEEGDGGDGAQDSERVWV |
Ga0308000_102178462 | 3300031848 | Marine | MREVLGAGRGVQAGEVETPAMAAEAGRETRRGAESDEESDGCDGAQYSARVRVRNTY |
Ga0315329_106229111 | 3300032048 | Seawater | MREVLGAGRGVQAGEVEIPAMAAEAGRETRQAAESDEESDGCDGPQDCERVSLRERSD |
Ga0314680_100425671 | 3300032521 | Seawater | MREVLGAGRGVQAGEVEISAMAAEAGRETRQGAESDEESDGCDGAQDCNTTYTKPKGFKIRPP |
Ga0314680_109140421 | 3300032521 | Seawater | MREVLGAGRGVQAGEVEIPAMAAEAGRETRQGAESDEESDGCDGAQDCNTTY |
Ga0314683_105029632 | 3300032617 | Seawater | MREVLGAGRGVQAGEVEIPAMAAEAGRETRQGAASDDESDGCDGAQDCNTTY |
Ga0314673_100418921 | 3300032650 | Seawater | MREVLGAGRGVQAGEVEIPAMAAEAGRETRQGAESDEESDGC |
Ga0314669_104328672 | 3300032708 | Seawater | MREVLGAGRGVQVGEVKIPAMAAEAEKETRQGAESDEESNGCDGAQDCER |
Ga0314690_100616941 | 3300032713 | Seawater | VIWVRGKCEEAMREVLGAGRGVQAGEVEIPAMAAEARRETRQGAESDEDSDGCDGAQDCEHV |
Ga0314693_103620102 | 3300032727 | Seawater | MREVLGAGRGVQAGEVEIPAMAAEAGRETRQGAESDEESDGCDGAQVCEHVRVRNTTYYQ |
Ga0314696_102202902 | 3300032728 | Seawater | MREVLGAGRGGQAGEVEIPAMAAEAGRETRQGAESDEE |
Ga0314711_102689532 | 3300032732 | Seawater | MREVLGAGRGVQAGEVEISAMAAEAGRETRQGAESDEESDGCDGAQDCERVRIS |
Ga0314706_104760191 | 3300032734 | Seawater | MREVLGAGRGVQAGEVEIPAMAAEAGRETRQGAASDEESDGCDGAQECNTTY |
Ga0314705_107010902 | 3300032744 | Seawater | MREVLGAGRGIQAGEVETPAMAAGARRVTRQGAEGDEQGDGGDRAHDSERVCLC |
Ga0314713_100257192 | 3300032748 | Seawater | MREVLGAGRGVQAGEVEISAMAAEAGRETRQGAESDEESDGCDGAQDCNTTY |
Ga0314694_104857132 | 3300032751 | Seawater | MREVLGAGRGVQAGEVEISAMAAEAGRETRQGAESDEESDGCDGAQD |
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