Metagenome / Metatranscriptome Family F105315

Select file to download:
Download

Basic Information
Family ID	F105315
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	37 residues
Representative Sequence	MEIALIVFILLVGIGAVVSGRDSRIDETARRRRYLG
Number of Associated Samples	85
Number of Associated Scaffolds	100

Basic Information

Family ID

F105315

Family Type

Metagenome / Metatranscriptome

Number of Sequences

100

Average Sequence Length

37 residues

Representative Sequence

MEIALIVFILLVGIGAVVSGRDSRIDETARRRRYLG

Number of Associated Samples

Number of Associated Scaffolds

100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	23.00 %
% of genes near scaffold ends (potentially truncated)	16.00 %
% of genes from short scaffolds (< 2000 bps)	83.00 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Quality Assessment

Transcriptomic Evidence

Yes

Most common taxonomic group

Bacteria

% of genes with valid RBS motifs

23.00 %

% of genes near scaffold ends (potentially truncated)

16.00 %

% of genes from short scaffolds (< 2000 bps)

83.00 %

Associated GOLD sequencing projects

AlphaFold2 3D model prediction

Yes

3D model pTM-score

0.44

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

Click on a Sequence Logo column to get its information.
Powered by Skylign

Hidden Markov Model

Powered by Skylign

Most Common Taxonomy
Group	Bacteria (62.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Taxonomy

Group

Bacteria (62.000 % of family members)

NCBI Taxonomy ID

Taxonomy

All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (15.000 % of family members)
Environment Ontology (ENVO)	Unclassified (29.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (24.000 % of family members)

Most Common Ecosystem

GOLD Ecosystem

Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment
(15.000 % of family members)

Environment Ontology (ENVO)

Unclassified
(29.000 % of family members)

Earth Microbiome Project Ontology (EMPO)

Host-associated → Plant → Plant rhizosphere
(24.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46 1LWAnN_06927680 2A2_c1_00722170 3A_all_C_00547390 4JGIcombinedJ13530_1008780691 5Ga0070665_1001196152 6Ga0074472_114309392 7Ga0066652_1011774453 8Ga0075021_100666372 9Ga0074062_120931542 10Ga0074063_137936173 11Ga0105044_101752672 12Ga0105248_130842692 13Ga0114942_14427872 14Ga0105238_115614072 15Ga0105249_128053492 16Ga0131092_101405623 17Ga0134123_108449662 18Ga0151490_16652402 19Ga0150985_1065729302 20Ga0150985_1076667373 21Ga0150984_1055240123 22Ga0157216_100878652 23Ga0157289_100878332 24Ga0157302_101480691 25Ga0164308_106562953 26Ga0157374_111559073 27Ga0075355_10766022 28Ga0075355_11049241 29Ga0163163_102917003 30Ga0157380_113080172 31Ga0157379_125860382 32Ga0157376_113491562 33Ga0167654_10441061 34Ga0167665_10044895 35Ga0167667_10036082 36Ga0167667_10037136 37Ga0167629_10864202 38Ga0163144_100613135 39Ga0163144_108980763 40Ga0132258_140053042 41Ga0136617_100068262 42Ga0163161_116800362 43Ga0190266_105198043 44Ga0184609_105797061 45Ga0190270_110453692 46Ga0190271_100535812 47Ga0190271_107685432 48Ga0163151_100415523 49Ga0163150_101816892 50Ga0210362_15740392 51Ga0193699_104660492 52Ga0182009_103349302 53Ga0247778_12365352 54Ga0247769_11416111 55Ga0233424_100955182 56Ga0233425_104575532 57Ga0207694_111353522 58Ga0207687_108059472 59Ga0207668_116394882 60Ga0207675_1023293343 61Ga0209797_100768282 62Ga0209798_101752631 63Ga0209798_104520812 64Ga0209591_102038753 65Ga0209023_100801343 66Ga0209023_103550663 67Ga0209068_101650071 68Ga0209254_100027055 69Ga0209069_101464262 70Ga0268266_107633003 71Ga0210366_104199822 72Ga0302264_10439492 73Ga0307316_103290192 74Ga0302257_11152712 75Ga0311336_109522371 76Ga0311333_101119142 77Ga0311333_102578662 78Ga0247826_114924812 79Ga0307498_104393602 80Ga0307498_104715941 81Ga0307506_101512303 82Ga0311364_117439492 83Ga0302321_1002898964 84Ga0315290_100547264 85Ga0315290_101981132 86Ga0315290_103555692 87Ga0315290_108807042 88Ga0315297_105894152 89Ga0302322_1032781291 90Ga0315278_108241112 91Ga0315278_110827381 92Ga0315292_103789102 93Ga0315283_101386472 94Ga0315283_101411753 95Ga0315283_108657291 96Ga0315271_101557733 97Ga0315270_104367232 98Ga0315287_107652262 99Ga0315273_117668232 100Ga0370497_0040727_252_389
Powered by MSAViewer

Full Alignment

Alignment of all the sequences in the family.

IDLabel

.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46

1LWAnN_06927680

2A2_c1_00722170

3A_all_C_00547390

4JGIcombinedJ13530_1008780691

5Ga0070665_1001196152

6Ga0074472_114309392

7Ga0066652_1011774453

8Ga0075021_100666372

9Ga0074062_120931542

10Ga0074063_137936173

11Ga0105044_101752672

12Ga0105248_130842692

13Ga0114942_14427872

14Ga0105238_115614072

15Ga0105249_128053492

16Ga0131092_101405623

17Ga0134123_108449662

18Ga0151490_16652402

19Ga0150985_1065729302

20Ga0150985_1076667373

21Ga0150984_1055240123

22Ga0157216_100878652

23Ga0157289_100878332

24Ga0157302_101480691

25Ga0164308_106562953

26Ga0157374_111559073

27Ga0075355_10766022

28Ga0075355_11049241

29Ga0163163_102917003

30Ga0157380_113080172

31Ga0157379_125860382

32Ga0157376_113491562

33Ga0167654_10441061

34Ga0167665_10044895

35Ga0167667_10036082

36Ga0167667_10037136

37Ga0167629_10864202

38Ga0163144_100613135

39Ga0163144_108980763

40Ga0132258_140053042

41Ga0136617_100068262

42Ga0163161_116800362

43Ga0190266_105198043

44Ga0184609_105797061

45Ga0190270_110453692

46Ga0190271_100535812

47Ga0190271_107685432

48Ga0163151_100415523

49Ga0163150_101816892

50Ga0210362_15740392

51Ga0193699_104660492

52Ga0182009_103349302

53Ga0247778_12365352

54Ga0247769_11416111

55Ga0233424_100955182

56Ga0233425_104575532

57Ga0207694_111353522

58Ga0207687_108059472

59Ga0207668_116394882

60Ga0207675_1023293343

61Ga0209797_100768282

62Ga0209798_101752631

63Ga0209798_104520812

64Ga0209591_102038753

65Ga0209023_100801343

66Ga0209023_103550663

67Ga0209068_101650071

68Ga0209254_100027055

69Ga0209069_101464262

70Ga0268266_107633003

71Ga0210366_104199822

72Ga0302264_10439492

73Ga0307316_103290192

74Ga0302257_11152712

75Ga0311336_109522371

76Ga0311333_101119142

77Ga0311333_102578662

78Ga0247826_114924812

79Ga0307498_104393602

80Ga0307498_104715941

81Ga0307506_101512303

82Ga0311364_117439492

83Ga0302321_1002898964

84Ga0315290_100547264

85Ga0315290_101981132

86Ga0315290_103555692

87Ga0315290_108807042

88Ga0315297_105894152

89Ga0302322_1032781291

90Ga0315278_108241112

91Ga0315278_110827381

92Ga0315292_103789102

93Ga0315283_101386472

94Ga0315283_101411753

95Ga0315283_108657291

96Ga0315271_101557733

97Ga0315270_104367232

98Ga0315287_107652262

99Ga0315273_117668232

100Ga0370497_0040727_252_389

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46 1LWAnN_06927680 2A_all_C_00547390 3JGIcombinedJ13530_1008780691 4Ga0074063_137936173 5Ga0150984_1055240123 6Ga0157216_100878652 7Ga0157302_101480691 8Ga0136617_100068262 9Ga0307316_103290192 10Ga0311336_109522371 11Ga0307498_104715941 12Ga0315271_101557733
Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36 1Ga0190266_105198043 2A2_c1_00722170 3A_all_C_00547390 4Ga0074472_114309392 5Ga0075021_100666372 6Ga0074062_120931542 7Ga0074063_137936173 8Ga0105248_130842692 9Ga0131092_101405623 10Ga0150984_1055240123 11Ga0157216_100878652 12Ga0075355_10766022 13Ga0167654_10441061 14Ga0136617_100068262 15Ga0184609_105797061 16Ga0190271_100535812 17Ga0163151_100415523 18Ga0233424_100955182 19Ga0207668_116394882 20Ga0207675_1023293343 21Ga0209798_104520812 22Ga0209591_102038753 23Ga0209068_101650071 24Ga0210366_104199822 25Ga0302264_10439492 26Ga0307316_103290192 27Ga0311336_109522371 28Ga0307498_104393602 29Ga0307498_104715941 30Ga0307506_101512303 31Ga0315290_100547264 32Ga0315290_101981132 33Ga0315292_103789102 34Ga0315271_101557733 35Ga0370497_0040727_252_389
Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 53.12% β-sheet: 0.00% Coil/Unstructured: 46.88%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
Powered by Feature Viewer

Predicted Topology & Secondary Structure

Classification:

Globular

Signal Peptide:

Yes

Secondary Structure distribution:

α-helix: 53.12% β-sheet: 0.00% Coil/Unstructured: 46.88%

Feature Viewer

Position :

Zoom :

x 1

Powered by Feature Viewer

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
Powered by PDBe Molstar

Structure Viewer

Per-residue confidence (pLDDT):
0-50 51-70 71-90 91-100

pTM-score: 0.44

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF02737	3HCDH_N	26.00
PF03466	LysR_substrate	25.00
PF00126	HTH_1	18.00
PF00999	Na_H_Exchanger	5.00
PF02803	Thiolase_C	3.00
PF07690	MFS_1	2.00
PF00171	Aldedh	2.00
PF13487	HD_5	1.00
PF03320	FBPase_glpX	1.00
PF00486	Trans_reg_C	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	26.00
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	26.00
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	26.00
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	26.00
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	26.00
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	26.00
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	26.00
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	5.00
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	5.00
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	5.00

COG ID

Name

Functional Category

% Frequency in 100 Family Scaffolds

COG0240

Glycerol-3-phosphate dehydrogenase

Energy production and conversion [C]

26.00

COG0287

Prephenate dehydrogenase

Amino acid transport and metabolism [E]

26.00

COG2084

3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase

Lipid transport and metabolism [I]

26.00

COG0677

UDP-N-acetyl-D-mannosaminuronate dehydrogenase

Cell wall/membrane/envelope biogenesis [M]

26.00

COG1004

UDP-glucose 6-dehydrogenase

Cell wall/membrane/envelope biogenesis [M]

26.00

COG1748

Saccharopine dehydrogenase, NADP-dependent

Amino acid transport and metabolism [E]

26.00

COG1250

3-hydroxyacyl-CoA dehydrogenase

Lipid transport and metabolism [I]

26.00

COG4651

Predicted Kef-type K+ transport protein, K+/H+ antiporter domain

Inorganic ion transport and metabolism [P]

5.00

COG3263

NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains

Energy production and conversion [C]

5.00

COG3004

Na+/H+ antiporter NhaA

Energy production and conversion [C]

5.00

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.00 %
Unclassified	root	N/A	38.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.00 %
Unclassified	root	N/A	38.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.00 %
Unclassified	root	N/A	38.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	49.00 %
Unclassified	root	N/A	38.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	49.00 %
Unclassified	root	N/A	38.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.00 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	16.00 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.00 %
Unclassified	root	N/A	38.00 %

Name	Rank	Taxonomy	Distribution
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	16.00 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.00 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.00 %
Unclassified	root	N/A	38.00 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.00 %

Name

Rank

Taxonomy

Distribution

Gaiellales

order

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales

16.00 %

Pseudonocardiales

order

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales

1.00 %

Solirubrobacterales

order

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales

1.00 %

Unclassified

root

N/A

38.00 %

unclassified Actinomycetia

no rank

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia

5.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.00 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	16.00 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.00 %
Unclassified	root	N/A	38.00 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	1.00 %

Name

Rank

Taxonomy

Distribution

Actinomycetia bacterium

species

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium

5.00 %

Gaiellaceae

family

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae

16.00 %

Pseudonocardiaceae

family

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae

1.00 %

Unclassified

root

N/A

38.00 %

unclassified Solirubrobacterales

no rank

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales

1.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.00 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	16.00 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.00 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1.00 %
Unclassified	root	N/A	38.00 %

Name

Rank

Taxonomy

Distribution

Actinomycetia bacterium

species

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium

5.00 %

Gaiella

genus

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella

16.00 %

Pseudonocardiaceae

family

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae

1.00 %

Solirubrobacterales bacterium URHD0059

species

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059

1.00 %

Unclassified

root

N/A

38.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.00 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	16.00 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.00 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1.00 %
Unclassified	root	N/A	38.00 %

Name

Rank

Taxonomy

Distribution

Actinomycetia bacterium

species

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium

5.00 %

Gaiella occulta

species

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta

16.00 %

Pseudonocardiaceae

family

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae

1.00 %

Solirubrobacterales bacterium URHD0059

species

1.00 %

Unclassified

root

N/A

38.00 %

Visualization

Powered by ApexCharts

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300023208\|Ga0233424_10095518	Not Available	1294	Open in IMG/M
(restricted) 3300024054\|Ga0233425_10457553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	516	Open in IMG/M
2088090009\|LWAnN_F624WLL02JB24P	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
2124908043\|A2_c1_ConsensusfromContig65588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	941	Open in IMG/M
2140918007\|ConsensusfromContig102239	Not Available	960	Open in IMG/M
3300001213\|JGIcombinedJ13530_100878069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	696	Open in IMG/M
3300005548\|Ga0070665_100119615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2636	Open in IMG/M
3300005833\|Ga0074472_11430939	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300006046\|Ga0066652_101177445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	726	Open in IMG/M
3300006354\|Ga0075021_10066637	All Organisms → cellular organisms → Bacteria	2101	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

(restricted) 3300023208|Ga0233424_10095518

Not Available

1294

Open in IMG/M

(restricted) 3300024054|Ga0233425_10457553

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta

516

Open in IMG/M

2088090009|LWAnN_F624WLL02JB24P

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria

501

Open in IMG/M

2124908043|A2_c1_ConsensusfromContig65588

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria

941

Open in IMG/M

2140918007|ConsensusfromContig102239

Not Available

960

Open in IMG/M

3300001213|JGIcombinedJ13530_100878069

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium

696

Open in IMG/M

3300005548|Ga0070665_100119615

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria

2636

Open in IMG/M

3300005833|Ga0074472_11430939

All Organisms → cellular organisms → Bacteria

639

Open in IMG/M

3300006046|Ga0066652_101177445

726

Open in IMG/M

3300006354|Ga0075021_10066637

All Organisms → cellular organisms → Bacteria

2101

Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	1.00%
Environmental	Environmental	80.00%
Host-Associated	Host-Associated	19.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	40.00%
Plants	Host-Associated → Plants	19.00%
Terrestrial	Environmental → Terrestrial	40.00%
Wastewater	Engineered → Wastewater	1.00%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge	1.00%
Freshwater	Environmental → Aquatic → Freshwater	32.00%
Marine	Environmental → Aquatic → Marine	3.00%
Peat	Environmental → Terrestrial → Peat	8.00%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.00%
Roots	Host-Associated → Plants → Roots	1.00%
Sediment	Environmental → Aquatic → Sediment	5.00%
Soil	Environmental → Terrestrial → Soil	30.00%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.00%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.00%
Ice	Environmental → Aquatic → Freshwater → Ice	3.00%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.00%
Lake	Environmental → Aquatic → Freshwater → Lake	21.00%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.00%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.00%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.00%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	1.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.00%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.00%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.00%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.00%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	2.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.00%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.00%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	15.00%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.00%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.00%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.00%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	6.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.00%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.00%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	2.00%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.00%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.00%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.00%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	1.00%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.00%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.00%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.00%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.00%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	8.00%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.00%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	2.00%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	2.00%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.00%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	4.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Sediment	1.00%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	6.00%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.00%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.00%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.00%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.00%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.00%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	15.00%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	2.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.00%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.00%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.00%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.00%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.00%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	3.00%

Visualization
Download SVG Download PNG Download CSV
Powered by ApexCharts

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090009	Freshwater sediment microbial communities from Lake Washington, Seattle, for methane and nitrogen Cycles - SIP 13C-methane anaerobic+nitrate	Environmental	Open in IMG/M
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Showing 1 to 10 of 85 entries

Previous1 2 3 4 5…9Next

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Protein ID	Sample Taxon ID	Habitat	Sequence
LWAnN_06927680	2088090009	Freshwater Sediment	MEIALIVFILLVGLGAVTSGRDSRIDENARRRRYLG
A2_c1_00722170	2124908043	Soil	MEIALIIFILLVGIGAVTIGRDSRIDESARRRRYLG
A_all_C_00547390	2140918007	Soil	MAIAVVLFIVLVAVGSVLWGRDSRIDETDRRRRYLG
JGIcombinedJ13530_1008780691	3300001213	Wetland	MIRPMEIAILLFIVLVGIGAVLAGADSRIDESARRRRYLG*
Ga0070665_1001196152	3300005548	Switchgrass Rhizosphere	MEIAVIVFILVVGIGAVVSGRDSRIDETARRRRYLG*
Ga0074472_114309392	3300005833	Sediment (Intertidal)	MEIALLVFILLVGIAAVTSGRDSRIDENARRRRYLG*
Ga0066652_1011774453	3300006046	Soil	MEIALIVFILLVGIGALVSGRDSRIDETARRRRYLG*
Ga0075021_100666372	3300006354	Watersheds	MAFALIIFIVLVGLGAVLGGRDSRIDDVARRRRYLG*
Ga0074062_120931542	3300006606	Soil	MAFALIIFIVLVGLGAALVGRDSRVDEVARRRRYLG*
Ga0074063_137936173	3300006953	Soil	METALIVFMLLVGPLAALFGRDSRIDEKGRRQHYLG*
Ga0105044_101752672	3300007521	Freshwater	MEIALIVFIVLVAAGSVVAGKDSRIDESARRRRYLG*
Ga0105248_130842692	3300009177	Switchgrass Rhizosphere	MEIALIVFILLVGIGAVLAGRDSRIDEKARTRRYLG*
Ga0114942_14427872	3300009527	Groundwater	MEIALIVFIVLVAVGSVLAGKDSRIDESARRRRYLG*
Ga0105238_115614072	3300009551	Corn Rhizosphere	MEIALIVFILLVGIGAVVAGRDSRIDETARRRRYLG*
Ga0105249_128053492	3300009553	Switchgrass Rhizosphere	MEIALIVFILLVGLGAVAAGRDSRIDETARRRRYLG*
Ga0131092_101405623	3300009870	Activated Sludge	MEIALIVFILLVGPLAALYGRDSRIDERGRRQRYLG*
Ga0134123_108449662	3300010403	Terrestrial Soil	MEIALIVFILLVGIGAVLSGRDSRIDEAARRRRYLG*
Ga0151490_16652402	3300011107	Soil	MEIALIVFILLVGIGAVVSGRDSRIDEAARRRRYLG*
Ga0150985_1065729302	3300012212	Avena Fatua Rhizosphere	MEIALIVFIVLVAIGAVTSGRDSRIDEKARMRRYLG*
Ga0150985_1076667373	3300012212	Avena Fatua Rhizosphere	PILEIALIVFILLVGIGAVVAGRDSRIDETARRRRYLG*
Ga0150984_1055240123	3300012469	Avena Fatua Rhizosphere	GIALIVLILLIGPLAVLYGRDSRIDERGRRERYLG*
Ga0157216_100878652	3300012668	Glacier Forefield Soil	MIHDDHHVVMAIALIVLILVVGPLAVLLGSDSRIDETSRRRRYLG*
Ga0157289_100878332	3300012903	Soil	MEIAVIVFILVVGIGAVVSGRDSRIDEAARRRRYLG*
Ga0157302_101480691	3300012915	Soil	YLLSHHLRMEIALIVFILLVGIGAVLAGRDSRIDEKARTRRYLG*
Ga0164308_106562953	3300012985	Soil	MEIALIVFILFVGIGAVAFGRDSRIDETARRRRYLG*
Ga0157374_111559073	3300013296	Miscanthus Rhizosphere	MEIAVIVFILVVGIGAVVSGRDSRIDETARRRRCLG*
Ga0075355_10766022	3300014322	Natural And Restored Wetlands	MEIAMLLFIVLVGIGAVLAGADSRIDESARRRRYLG*
Ga0075355_11049241	3300014322	Natural And Restored Wetlands	RPMEIVMLLFIVLVGIGAVFAGADSRIDESARRRRYLG*
Ga0163163_102917003	3300014325	Switchgrass Rhizosphere	MEIALIVFILLVGLGAVFAGRDSRIDETARRRRYLG*
Ga0157380_113080172	3300014326	Switchgrass Rhizosphere	MEIALIVFILLVGIGAVVGGRDSRIDETARRRRYLG*
Ga0157379_125860382	3300014968	Switchgrass Rhizosphere	MEIALIVFILIVGIGAVVAGRDSRIDETARRRRYLG*
Ga0157376_113491562	3300014969	Miscanthus Rhizosphere	MEIALIVFILLVGIGAVFAGRDSRIDETARRRRYLG*
Ga0167654_10441061	3300015084	Glacier Forefield Soil	MEIAVIVFIVLVALGAVTSGRDSRIDEAARRRRYLG*
Ga0167665_10044895	3300015163	Glacier Forefield Soil	MEIVLIVFILLVGIGAVVSGRDSRIDETARRRRYLG*
Ga0167667_10036082	3300015189	Glacier Forefield Soil	MEIALIVFIVLVAVGSVYAGKDSRIDESARRRRYLG*
Ga0167667_10037136	3300015189	Glacier Forefield Soil	MEIALIVFIVLVALGSVVAGKDSRIDESARRRRYLG*
Ga0167629_10864202	3300015209	Glacier Forefield Soil	MEIALIVFIVLVAIGAVTSGRDSRIDETARRRRYLG*
Ga0163144_100613135	3300015360	Freshwater Microbial Mat	MEIALLVFIILVALGSVFAGKDSRIDESARGRRYLG*
Ga0163144_108980763	3300015360	Freshwater Microbial Mat	MEIALIVFIVLVAAGSVVAGKDSRIDELARRRRYLG*
Ga0132258_140053042	3300015371	Arabidopsis Rhizosphere	MEIALIVFIVLVGIGAVVSGRDSRIDEKARTRRYLG*
Ga0136617_100068262	3300017789	Polar Desert Sand	MVAEREDERMELVLLGFLLLVGPLAVVFGRDSRIDEVDRRRRYLG
Ga0163161_116800362	3300017792	Switchgrass Rhizosphere	MEIAVIVFILVVGIGAVVSGRDSRIDETARRRRYLG
Ga0190266_105198043	3300017965	Soil	MEIALIVFILLVGIGAVVSGRDSRIDETARRRRYLG
Ga0184609_105797061	3300018076	Groundwater Sediment	MEIALIILLLLIGPLAALGGRDSRIDEAARRRHYLG
Ga0190270_110453692	3300018469	Soil	MEIALIVFILLVGIGAVVGGRDSRIDETARRRRYLG
Ga0190271_100535812	3300018481	Soil	MEIALIVFIVLVALGSVFAGKDSRLDESARRRRYLG
Ga0190271_107685432	3300018481	Soil	MEIALIVFIVLVGIGAVVSGRDSRIDETARRRRYLG
Ga0163151_100415523	3300020057	Freshwater Microbial Mat	MEIALLVFIILVALGSVFAGKDSRIDESARGRRYLG
Ga0163150_101816892	3300020195	Freshwater Microbial Mat	MEIALLVFIILVALGSVLAGKDSRIDESARGRRYLG
Ga0210362_15740392	3300021329	Estuarine	MGIALLVFILLVGIAAVTSGRDSRIDENARRRRYLG
Ga0193699_104660492	3300021363	Soil	MEIALIVFILVVGIGAVVAGRDSRIDETARRRRYLG
Ga0182009_103349302	3300021445	Soil	MEIALIVFILVVGIGAVVSGRDSRIDEAARRRRYLG
Ga0247778_12365352	3300022894	Plant Litter	MEIALIVFILLVGLGAVFAGRDSRIDETARRRRYLG
Ga0247769_11416111	3300022904	Plant Litter	EIALIVFILLVGIGAVVSGRDSRIDEAARRRRYLG
(restricted) Ga0233424_100955182	3300023208	Freshwater	MGMEIALIVFLLLVGPLALLGGRDSRIDEAERRRHYLG
(restricted) Ga0233425_104575532	3300024054	Freshwater	MEIALIVFLLLVGPLALLGGRDSRIDEAERRRHYLG
Ga0207694_111353522	3300025924	Corn Rhizosphere	MEIALIVFILLVGIGAVVAGRDSRIDETARRRRYLG
Ga0207687_108059472	3300025927	Miscanthus Rhizosphere	MEIAVIVFILVVGIGAVVSGRDSRIDEAARRRRYLG
Ga0207668_116394882	3300025972	Switchgrass Rhizosphere	MEIALIVFIVLVAVGAVFSGRDSRIDEKARQRRYLG
Ga0207675_1023293343	3300026118	Switchgrass Rhizosphere	ADMEIAVIVFILVVGIGAVVSGRDSRVDEAARRRRYLG
Ga0209797_100768282	3300027831	Wetland Sediment	MEIALILFILLVGIAAVTSGRDSRIDENARRRRYLG
Ga0209798_101752631	3300027843	Wetland Sediment	MEIALLVFILLVGIAAVTSGRDSRIDENARRRRYLG
Ga0209798_104520812	3300027843	Wetland Sediment	MEIALLLFVLLVAIGAVASGSDSRIDEAARRRRYLG
Ga0209591_102038753	3300027850	Freshwater	MDIALIVFIVLVAAGSVVAGKDSRIDESARRRRYLG
Ga0209023_100801343	3300027870	Freshwater And Sediment	MEIALIVFILLVGIGAVVSGRDSRIDEIARRRRYLG
Ga0209023_103550663	3300027870	Freshwater And Sediment	MQIALIVFIVLVAVGSVFAGKDSRIDESARRRRYLG
Ga0209068_101650071	3300027894	Watersheds	MALALIIFIVIVGLGAVRGGRDSRIDEVARRRRYLG
Ga0209254_100027055	3300027897	Freshwater Lake Sediment	MEIALLVFILLVGLAAVTSGRDSRIDENARRRRYLG
Ga0209069_101464262	3300027915	Watersheds	MMRGMEIALIVFILLVGIGAVVSGRDSRIDETARRRRYLG
Ga0268266_107633003	3300028379	Switchgrass Rhizosphere	AAMEIALIVFILLVGIGAVVSGRDSRIDEAARRRRYLG
Ga0210366_104199822	3300028420	Estuarine	MEIALIVFLVLVTVGAVLVGKDSRIDEASRRRRYLG
Ga0302264_10439492	3300028732	Fen	MEIAVIVFIVLVGLGAVLAGADSRIDEAARRRRYLG
Ga0307316_103290192	3300028755	Soil	SSHHVDMEIVLLLFILLVGVGAVLGGRDSRIDEVARRRRYHG
Ga0302257_11152712	3300028855	Fen	MRLMEIALIVFILLVGIGAVTVGRDSRIDEAARRRRYLG
Ga0311336_109522371	3300029990	Fen	LIVPDRHTVSMEIALIVFMLLVGPLAVLFGHDSRIDERGRRQHYLG
Ga0311333_101119142	3300030114	Fen	MMRLMEIALIVFILLVGIGAVTVGRDSRIDEAARRRRYLG
Ga0311333_102578662	3300030114	Fen	MEIALIVFMLLVGPLAVLFGHDSRIDERGRRQHYLG
Ga0247826_114924812	3300030336	Soil	MEIALIVFILLVGIGAVLSGRDSRIDEAARRRRYLG
Ga0307498_104393602	3300031170	Soil	MEIAVIVFILLVGLAAVTVGRDSRIDETARRRRYLG
Ga0307498_104715941	3300031170	Soil	IHVRHTVSMEIALIVLFLLVGPAAILAGRDSRIDEAGRRRRYLG
Ga0307506_101512303	3300031366	Soil	MGIALIVFIVLVGIGAVTSGRDSRIDETARQRRYLG
Ga0311364_117439492	3300031521	Fen	MRDMEIALMVFILLVGIGAVTVGRDSRIDETARRRRYLG
Ga0302321_1002898964	3300031726	Fen	MEIALIVFILLVGIGAVTVGRDSRIDETARRRRYLG
Ga0315290_100547264	3300031834	Sediment	MEIALIVFVLLVGLGAVAFGSDSRIDENARRRRYLG
Ga0315290_101981132	3300031834	Sediment	MEIAVIIFIVLVGLGSVAFGRDSRIDENARRRRYLG
Ga0315290_103555692	3300031834	Sediment	MEIALIVFILLVGIGAVVFGRDSRIDEMARRRRYLG
Ga0315290_108807042	3300031834	Sediment	MEIALIVFVLLVGLGAVAFGTDSRIDENARRRRYLG
Ga0315297_105894152	3300031873	Sediment	MEIALIVFIVLVAVGSVFAGKDSRIDESARRRRYLG
Ga0302322_1032781291	3300031902	Fen	LIIPDRHTVSMEIALIVFMLLVGPLAVLFGHDSRIDERGRRQHYLG
Ga0315278_108241112	3300031997	Sediment	MEIAVIIFILLVGLGSVAFGRDSRIDENARRRRYLG
Ga0315278_110827381	3300031997	Sediment	EIALIVFIVLVAVGSVFAGKDSRIDESARRRRYLG
Ga0315292_103789102	3300032143	Sediment	MEIALIVFVLLIGLVAVTVGSDSRIDENARRRRYLG
Ga0315283_101386472	3300032164	Sediment	MEIALIVFILLVGIAAVTSGRDSRIDENARRRRYLG
Ga0315283_101411753	3300032164	Sediment	MEIALIVFILLVGLGAVVSGRDSRIDENARRRRYLG
Ga0315283_108657291	3300032164	Sediment	SAHMEIALIVFVLLVGLGAVAFGTDSRIDENARRRRYLG
Ga0315271_101557733	3300032256	Sediment	MEIALIVFVLLVAVGSIFAGKDSRIDETARTRRYLG
Ga0315270_104367232	3300032275	Sediment	MEIAVIIFILLVGLGSVAFGRDSRIDENARRCRYLG
Ga0315287_107652262	3300032397	Sediment	MEIALIVFVLLIGLAAVTIGSDSRIDENARRRRYLG
Ga0315273_117668232	3300032516	Sediment	MEIALIVFILLVGIGAVVFGRDSRIDEAARRRRYLG
Ga0370497_0040727_252_389	3300034965	Untreated Peat Soil	MIPVRHTVSMEIALIVFMLLVGPVALLLGRDSRIDEAGRRRNYLG

Protein ID

Sample Taxon ID

Habitat

Sequence

LWAnN_06927680

2088090009

Freshwater Sediment

MEIALIVFILLVGLGAVTSGRDSRIDENARRRRYLG

A2_c1_00722170

2124908043

Soil

MEIALIIFILLVGIGAVTIGRDSRIDESARRRRYLG

A_all_C_00547390

2140918007

Soil

MAIAVVLFIVLVAVGSVLWGRDSRIDETDRRRRYLG

JGIcombinedJ13530_1008780691

3300001213

Wetland

MIRPMEIAILLFIVLVGIGAVLAGADSRIDESARRRRYLG*

Ga0070665_1001196152

3300005548

Switchgrass Rhizosphere

MEIAVIVFILVVGIGAVVSGRDSRIDETARRRRYLG*

Ga0074472_114309392

3300005833

Sediment (Intertidal)

MEIALLVFILLVGIAAVTSGRDSRIDENARRRRYLG*

Ga0066652_1011774453

3300006046

Soil

MEIALIVFILLVGIGALVSGRDSRIDETARRRRYLG*

Ga0075021_100666372

3300006354

Watersheds

MAFALIIFIVLVGLGAVLGGRDSRIDDVARRRRYLG*

Ga0074062_120931542

3300006606

Soil

MAFALIIFIVLVGLGAALVGRDSRVDEVARRRRYLG*

Ga0074063_137936173

3300006953

Soil

METALIVFMLLVGPLAALFGRDSRIDEKGRRQHYLG*

Ga0105044_101752672

3300007521

Freshwater

MEIALIVFIVLVAAGSVVAGKDSRIDESARRRRYLG*

Ga0105248_130842692

3300009177

Switchgrass Rhizosphere

MEIALIVFILLVGIGAVLAGRDSRIDEKARTRRYLG*

Ga0114942_14427872

3300009527

Groundwater

MEIALIVFIVLVAVGSVLAGKDSRIDESARRRRYLG*

Ga0105238_115614072

3300009551

Corn Rhizosphere

MEIALIVFILLVGIGAVVAGRDSRIDETARRRRYLG*

Ga0105249_128053492

3300009553

Switchgrass Rhizosphere

MEIALIVFILLVGLGAVAAGRDSRIDETARRRRYLG*

Ga0131092_101405623

3300009870

Activated Sludge

MEIALIVFILLVGPLAALYGRDSRIDERGRRQRYLG*

Ga0134123_108449662

3300010403

Terrestrial Soil

MEIALIVFILLVGIGAVLSGRDSRIDEAARRRRYLG*

Ga0151490_16652402

3300011107

Soil

MEIALIVFILLVGIGAVVSGRDSRIDEAARRRRYLG*

Ga0150985_1065729302

3300012212

Avena Fatua Rhizosphere

MEIALIVFIVLVAIGAVTSGRDSRIDEKARMRRYLG*

Ga0150985_1076667373

3300012212

Avena Fatua Rhizosphere

PILEIALIVFILLVGIGAVVAGRDSRIDETARRRRYLG*

Ga0150984_1055240123

3300012469

Avena Fatua Rhizosphere

GIALIVLILLIGPLAVLYGRDSRIDERGRRERYLG*

Ga0157216_100878652

3300012668

Glacier Forefield Soil

MIHDDHHVVMAIALIVLILVVGPLAVLLGSDSRIDETSRRRRYLG*

Ga0157289_100878332

3300012903

Soil

MEIAVIVFILVVGIGAVVSGRDSRIDEAARRRRYLG*

Ga0157302_101480691

3300012915

Soil

YLLSHHLRMEIALIVFILLVGIGAVLAGRDSRIDEKARTRRYLG*

Ga0164308_106562953

3300012985

Soil

MEIALIVFILFVGIGAVAFGRDSRIDETARRRRYLG*

Ga0157374_111559073

3300013296

Miscanthus Rhizosphere

MEIAVIVFILVVGIGAVVSGRDSRIDETARRRRCLG*

Ga0075355_10766022

3300014322

Natural And Restored Wetlands

MEIAMLLFIVLVGIGAVLAGADSRIDESARRRRYLG*

Ga0075355_11049241

3300014322

Natural And Restored Wetlands

RPMEIVMLLFIVLVGIGAVFAGADSRIDESARRRRYLG*

Ga0163163_102917003

3300014325

Switchgrass Rhizosphere

MEIALIVFILLVGLGAVFAGRDSRIDETARRRRYLG*

Ga0157380_113080172

3300014326

Switchgrass Rhizosphere

MEIALIVFILLVGIGAVVGGRDSRIDETARRRRYLG*

Ga0157379_125860382

3300014968

Switchgrass Rhizosphere

MEIALIVFILIVGIGAVVAGRDSRIDETARRRRYLG*

Ga0157376_113491562

3300014969

Miscanthus Rhizosphere

MEIALIVFILLVGIGAVFAGRDSRIDETARRRRYLG*

Ga0167654_10441061

3300015084

Glacier Forefield Soil

MEIAVIVFIVLVALGAVTSGRDSRIDEAARRRRYLG*

Ga0167665_10044895

3300015163

Glacier Forefield Soil

MEIVLIVFILLVGIGAVVSGRDSRIDETARRRRYLG*

Ga0167667_10036082

3300015189

Glacier Forefield Soil

MEIALIVFIVLVAVGSVYAGKDSRIDESARRRRYLG*

Ga0167667_10037136

3300015189

Glacier Forefield Soil

MEIALIVFIVLVALGSVVAGKDSRIDESARRRRYLG*

Ga0167629_10864202

3300015209

Glacier Forefield Soil

MEIALIVFIVLVAIGAVTSGRDSRIDETARRRRYLG*

Ga0163144_100613135

3300015360

Freshwater Microbial Mat

MEIALLVFIILVALGSVFAGKDSRIDESARGRRYLG*

Ga0163144_108980763

3300015360

Freshwater Microbial Mat

MEIALIVFIVLVAAGSVVAGKDSRIDELARRRRYLG*

Ga0132258_140053042

3300015371

Arabidopsis Rhizosphere

MEIALIVFIVLVGIGAVVSGRDSRIDEKARTRRYLG*

Ga0136617_100068262

3300017789

Polar Desert Sand

MVAEREDERMELVLLGFLLLVGPLAVVFGRDSRIDEVDRRRRYLG

Ga0163161_116800362

3300017792

Switchgrass Rhizosphere

MEIAVIVFILVVGIGAVVSGRDSRIDETARRRRYLG

Ga0190266_105198043

3300017965

Soil

MEIALIVFILLVGIGAVVSGRDSRIDETARRRRYLG

Ga0184609_105797061

3300018076

Groundwater Sediment

MEIALIILLLLIGPLAALGGRDSRIDEAARRRHYLG

Ga0190270_110453692

3300018469

Soil

MEIALIVFILLVGIGAVVGGRDSRIDETARRRRYLG

Ga0190271_100535812

3300018481

Soil

MEIALIVFIVLVALGSVFAGKDSRLDESARRRRYLG

Ga0190271_107685432

3300018481

Soil

MEIALIVFIVLVGIGAVVSGRDSRIDETARRRRYLG

Ga0163151_100415523

3300020057

Freshwater Microbial Mat

MEIALLVFIILVALGSVFAGKDSRIDESARGRRYLG

Ga0163150_101816892

3300020195

Freshwater Microbial Mat

MEIALLVFIILVALGSVLAGKDSRIDESARGRRYLG

Ga0210362_15740392

3300021329

Estuarine

MGIALLVFILLVGIAAVTSGRDSRIDENARRRRYLG

Ga0193699_104660492

3300021363

Soil

MEIALIVFILVVGIGAVVAGRDSRIDETARRRRYLG

Ga0182009_103349302

3300021445

Soil

MEIALIVFILVVGIGAVVSGRDSRIDEAARRRRYLG

Ga0247778_12365352

3300022894

Plant Litter

MEIALIVFILLVGLGAVFAGRDSRIDETARRRRYLG

Ga0247769_11416111

3300022904

Plant Litter

EIALIVFILLVGIGAVVSGRDSRIDEAARRRRYLG

(restricted) Ga0233424_100955182

3300023208

Freshwater

MGMEIALIVFLLLVGPLALLGGRDSRIDEAERRRHYLG

(restricted) Ga0233425_104575532

3300024054

Freshwater

MEIALIVFLLLVGPLALLGGRDSRIDEAERRRHYLG

Ga0207694_111353522

3300025924

Corn Rhizosphere

MEIALIVFILLVGIGAVVAGRDSRIDETARRRRYLG

Ga0207687_108059472

3300025927

Miscanthus Rhizosphere

MEIAVIVFILVVGIGAVVSGRDSRIDEAARRRRYLG

Ga0207668_116394882

3300025972

Switchgrass Rhizosphere

MEIALIVFIVLVAVGAVFSGRDSRIDEKARQRRYLG

Ga0207675_1023293343

3300026118

Switchgrass Rhizosphere

ADMEIAVIVFILVVGIGAVVSGRDSRVDEAARRRRYLG

Ga0209797_100768282

3300027831

Wetland Sediment

MEIALILFILLVGIAAVTSGRDSRIDENARRRRYLG

Ga0209798_101752631

3300027843

Wetland Sediment

MEIALLVFILLVGIAAVTSGRDSRIDENARRRRYLG

Ga0209798_104520812

3300027843

Wetland Sediment

MEIALLLFVLLVAIGAVASGSDSRIDEAARRRRYLG

Ga0209591_102038753

3300027850

Freshwater

MDIALIVFIVLVAAGSVVAGKDSRIDESARRRRYLG

Ga0209023_100801343

3300027870

Freshwater And Sediment

MEIALIVFILLVGIGAVVSGRDSRIDEIARRRRYLG

Ga0209023_103550663

3300027870

Freshwater And Sediment

MQIALIVFIVLVAVGSVFAGKDSRIDESARRRRYLG

Ga0209068_101650071

3300027894

Watersheds

MALALIIFIVIVGLGAVRGGRDSRIDEVARRRRYLG

Ga0209254_100027055

3300027897

Freshwater Lake Sediment

MEIALLVFILLVGLAAVTSGRDSRIDENARRRRYLG

Ga0209069_101464262

3300027915

Watersheds

MMRGMEIALIVFILLVGIGAVVSGRDSRIDETARRRRYLG

Ga0268266_107633003

3300028379

Switchgrass Rhizosphere

AAMEIALIVFILLVGIGAVVSGRDSRIDEAARRRRYLG

Ga0210366_104199822

3300028420

Estuarine

MEIALIVFLVLVTVGAVLVGKDSRIDEASRRRRYLG

Ga0302264_10439492

3300028732

Fen

MEIAVIVFIVLVGLGAVLAGADSRIDEAARRRRYLG

Ga0307316_103290192

3300028755

Soil

SSHHVDMEIVLLLFILLVGVGAVLGGRDSRIDEVARRRRYHG

Ga0302257_11152712

3300028855

Fen

MRLMEIALIVFILLVGIGAVTVGRDSRIDEAARRRRYLG

Ga0311336_109522371

3300029990

Fen

LIVPDRHTVSMEIALIVFMLLVGPLAVLFGHDSRIDERGRRQHYLG

Ga0311333_101119142

3300030114

Fen

MMRLMEIALIVFILLVGIGAVTVGRDSRIDEAARRRRYLG

Ga0311333_102578662

3300030114

Fen

MEIALIVFMLLVGPLAVLFGHDSRIDERGRRQHYLG

Ga0247826_114924812

3300030336

Soil

MEIALIVFILLVGIGAVLSGRDSRIDEAARRRRYLG

Ga0307498_104393602

3300031170

Soil

MEIAVIVFILLVGLAAVTVGRDSRIDETARRRRYLG

Ga0307498_104715941

3300031170

Soil

IHVRHTVSMEIALIVLFLLVGPAAILAGRDSRIDEAGRRRRYLG

Ga0307506_101512303

3300031366

Soil

MGIALIVFIVLVGIGAVTSGRDSRIDETARQRRYLG

Ga0311364_117439492

3300031521

Fen

MRDMEIALMVFILLVGIGAVTVGRDSRIDETARRRRYLG

Ga0302321_1002898964

3300031726

Fen

MEIALIVFILLVGIGAVTVGRDSRIDETARRRRYLG

Ga0315290_100547264

3300031834

Sediment

MEIALIVFVLLVGLGAVAFGSDSRIDENARRRRYLG

Ga0315290_101981132

3300031834

Sediment

MEIAVIIFIVLVGLGSVAFGRDSRIDENARRRRYLG

Ga0315290_103555692

3300031834

Sediment

MEIALIVFILLVGIGAVVFGRDSRIDEMARRRRYLG

Ga0315290_108807042

3300031834

Sediment

MEIALIVFVLLVGLGAVAFGTDSRIDENARRRRYLG

Ga0315297_105894152

3300031873

Sediment

MEIALIVFIVLVAVGSVFAGKDSRIDESARRRRYLG

Ga0302322_1032781291

3300031902

Fen

LIIPDRHTVSMEIALIVFMLLVGPLAVLFGHDSRIDERGRRQHYLG

Ga0315278_108241112

3300031997

Sediment

MEIAVIIFILLVGLGSVAFGRDSRIDENARRRRYLG

Ga0315278_110827381

3300031997

Sediment

EIALIVFIVLVAVGSVFAGKDSRIDESARRRRYLG

Ga0315292_103789102

3300032143

Sediment

MEIALIVFVLLIGLVAVTVGSDSRIDENARRRRYLG

Ga0315283_101386472

3300032164

Sediment

MEIALIVFILLVGIAAVTSGRDSRIDENARRRRYLG

Ga0315283_101411753

3300032164

Sediment

MEIALIVFILLVGLGAVVSGRDSRIDENARRRRYLG

Ga0315283_108657291

3300032164

Sediment

SAHMEIALIVFVLLVGLGAVAFGTDSRIDENARRRRYLG

Ga0315271_101557733

3300032256

Sediment

MEIALIVFVLLVAVGSIFAGKDSRIDETARTRRYLG

Ga0315270_104367232

3300032275

Sediment

MEIAVIIFILLVGLGSVAFGRDSRIDENARRCRYLG

Ga0315287_107652262

3300032397

Sediment

MEIALIVFVLLIGLAAVTIGSDSRIDENARRRRYLG

Ga0315273_117668232

3300032516

Sediment

MEIALIVFILLVGIGAVVFGRDSRIDEAARRRRYLG

Ga0370497_0040727_252_389

3300034965

Untreated Peat Soil

MIPVRHTVSMEIALIVFMLLVGPVALLLGRDSRIDEAGRRRNYLG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters