NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F105118

Metagenome / Metatranscriptome Family F105118

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105118
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 92 residues
Representative Sequence MYARVTSFKVDPSRLPELSAKIKEMGPRAKALPGMVDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLSGAPKTDAYENAAHITG
Number of Associated Samples 90
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 76.00 %
% of genes near scaffold ends (potentially truncated) 38.00 %
% of genes from short scaffolds (< 2000 bps) 83.00 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction Yes
3D model pTM-score0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(12.000 % of family members)
Environment Ontology (ENVO) Unclassified
(24.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 30.89%    β-sheet: 25.20%    Coil/Unstructured: 43.90%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.77
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.58.4.11: PA3566-liked2pd1a12pd10.82519
d.58.4.17: SOR-liked6m35a_6m350.82446
d.58.4.5: PG130-liked1iuja_1iuj0.81167
d.58.4.0: automated matchesd3hx9a_3hx90.80063
d.58.4.18: YbaA-liked2okqa12okq0.79126

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00890FAD_binding_2 29.00
PF00563EAL 24.00
PF00491Arginase 5.00
PF12860PAS_7 3.00
PF00496SBP_bac_5 3.00
PF00990GGDEF 2.00
PF03992ABM 2.00
PF13481AAA_25 1.00
PF12831FAD_oxidored 1.00
PF05763DUF835 1.00
PF01799Fer2_2 1.00
PF00528BPD_transp_1 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG2200EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)Signal transduction mechanisms [T] 24.00
COG3434c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domainsSignal transduction mechanisms [T] 24.00
COG4943Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domainsSignal transduction mechanisms [T] 24.00
COG5001Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domainSignal transduction mechanisms [T] 24.00
COG0010Arginase/agmatinase family enzymeAmino acid transport and metabolism [E] 5.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_102858541All Organisms → cellular organisms → Bacteria2044Open in IMG/M
3300002120|C687J26616_10007437All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4422Open in IMG/M
3300004479|Ga0062595_100792530All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria779Open in IMG/M
3300005181|Ga0066678_11107172All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger → Salipiger mucosus509Open in IMG/M
3300005332|Ga0066388_100420749All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae1979Open in IMG/M
3300005332|Ga0066388_101967411All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1046Open in IMG/M
3300005332|Ga0066388_104729792All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora glauca693Open in IMG/M
3300005332|Ga0066388_107937493All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger → Salipiger mucosus531Open in IMG/M
3300005338|Ga0068868_100387855All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1203Open in IMG/M
3300005366|Ga0070659_101642112All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger → Salipiger mucosus574Open in IMG/M
3300005434|Ga0070709_11064370All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales646Open in IMG/M
3300005440|Ga0070705_100247701All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1249Open in IMG/M
3300005529|Ga0070741_10032089All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales7259Open in IMG/M
3300005529|Ga0070741_10042967All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5754Open in IMG/M
3300005529|Ga0070741_11266563All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales619Open in IMG/M
3300005560|Ga0066670_10655028All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium637Open in IMG/M
3300005561|Ga0066699_11234280All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria513Open in IMG/M
3300005713|Ga0066905_100176556All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus1571Open in IMG/M
3300005713|Ga0066905_102319047All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300005764|Ga0066903_100871469All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae1624Open in IMG/M
3300006046|Ga0066652_100494790All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1134Open in IMG/M
3300006578|Ga0074059_12157154All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales708Open in IMG/M
3300006791|Ga0066653_10306398All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales800Open in IMG/M
3300006794|Ga0066658_10461837All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales691Open in IMG/M
3300006865|Ga0073934_10002658All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria36146Open in IMG/M
3300009147|Ga0114129_10699528All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1303Open in IMG/M
3300009147|Ga0114129_11126600All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales981Open in IMG/M
3300009148|Ga0105243_12494222All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria556Open in IMG/M
3300009177|Ga0105248_10434872All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1478Open in IMG/M
3300009553|Ga0105249_12176726All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales627Open in IMG/M
3300009792|Ga0126374_10241818All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1172Open in IMG/M
3300009792|Ga0126374_11101389All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium630Open in IMG/M
3300010043|Ga0126380_10603719All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales865Open in IMG/M
3300010046|Ga0126384_11299289All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales675Open in IMG/M
3300010047|Ga0126382_10146449All Organisms → cellular organisms → Bacteria1609Open in IMG/M
3300010048|Ga0126373_10723799All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1054Open in IMG/M
3300010358|Ga0126370_10656711All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales914Open in IMG/M
3300010359|Ga0126376_11813638All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales648Open in IMG/M
3300010362|Ga0126377_10583543All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1160Open in IMG/M
3300010366|Ga0126379_10225226All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae1825Open in IMG/M
3300010371|Ga0134125_11168558All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales841Open in IMG/M
3300010397|Ga0134124_11217935All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales773Open in IMG/M
3300010397|Ga0134124_12823457All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales529Open in IMG/M
3300010398|Ga0126383_11194486All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales850Open in IMG/M
3300010401|Ga0134121_12699631All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales541Open in IMG/M
3300011441|Ga0137452_1225367All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales636Open in IMG/M
3300012198|Ga0137364_11344004All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales531Open in IMG/M
3300012668|Ga0157216_10094043All Organisms → cellular organisms → Bacteria → Proteobacteria1462Open in IMG/M
3300012929|Ga0137404_11387184All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria649Open in IMG/M
3300012948|Ga0126375_10255838All Organisms → cellular organisms → Bacteria → Proteobacteria1189Open in IMG/M
3300012957|Ga0164303_10492389All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales783Open in IMG/M
3300012958|Ga0164299_10521856All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales795Open in IMG/M
3300013297|Ga0157378_10316031All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1516Open in IMG/M
3300014326|Ga0157380_10414055All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1283Open in IMG/M
3300014326|Ga0157380_12257727All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales608Open in IMG/M
3300015195|Ga0167658_1009094All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga3142Open in IMG/M
3300015201|Ga0173478_10825503All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales511Open in IMG/M
3300015264|Ga0137403_11112907All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium636Open in IMG/M
3300015371|Ga0132258_10288201All Organisms → cellular organisms → Bacteria → Proteobacteria4033Open in IMG/M
3300015373|Ga0132257_100840363All Organisms → cellular organisms → Bacteria → Proteobacteria1148Open in IMG/M
3300015374|Ga0132255_100837000All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1373Open in IMG/M
3300016270|Ga0182036_10701860All Organisms → cellular organisms → Bacteria → Proteobacteria818Open in IMG/M
3300016341|Ga0182035_10039422All Organisms → cellular organisms → Bacteria → Proteobacteria3127Open in IMG/M
3300017944|Ga0187786_10012990All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2073Open in IMG/M
3300018032|Ga0187788_10173084All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales824Open in IMG/M
3300018075|Ga0184632_10198057All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales884Open in IMG/M
3300018078|Ga0184612_10350912All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales748Open in IMG/M
3300018422|Ga0190265_10145206All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2312Open in IMG/M
3300018429|Ga0190272_10046732All Organisms → cellular organisms → Bacteria → Proteobacteria2475Open in IMG/M
3300018468|Ga0066662_11885701All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales625Open in IMG/M
3300018476|Ga0190274_10278076All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1540Open in IMG/M
3300018482|Ga0066669_10357821All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1216Open in IMG/M
3300019377|Ga0190264_10472839All Organisms → cellular organisms → Bacteria → Proteobacteria845Open in IMG/M
3300021168|Ga0210406_11379241All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales504Open in IMG/M
3300024330|Ga0137417_1341325All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2096Open in IMG/M
3300024347|Ga0179591_1108350All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2256Open in IMG/M
3300025174|Ga0209324_10665994All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales601Open in IMG/M
3300025310|Ga0209172_10000430All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales117610Open in IMG/M
3300025313|Ga0209431_10018216All Organisms → cellular organisms → Bacteria → Proteobacteria5391Open in IMG/M
3300025918|Ga0207662_10119148All Organisms → cellular organisms → Bacteria1654Open in IMG/M
3300025927|Ga0207687_10418027All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1106Open in IMG/M
3300027669|Ga0208981_1124832All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales656Open in IMG/M
3300027909|Ga0209382_10200992All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2284Open in IMG/M
3300028381|Ga0268264_12499620All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales522Open in IMG/M
3300028792|Ga0307504_10359309All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales563Open in IMG/M
3300031544|Ga0318534_10420544All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales767Open in IMG/M
3300031572|Ga0318515_10164494All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1185Open in IMG/M
3300031652|Ga0315553_10046997All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2447Open in IMG/M
3300031668|Ga0318542_10187621All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300031680|Ga0318574_10660338All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium613Open in IMG/M
3300031719|Ga0306917_11106469All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales617Open in IMG/M
3300031846|Ga0318512_10537638All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales594Open in IMG/M
3300031879|Ga0306919_11389587All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium530Open in IMG/M
3300031893|Ga0318536_10282181All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium843Open in IMG/M
3300031949|Ga0214473_10365332All Organisms → cellular organisms → Bacteria → Proteobacteria1635Open in IMG/M
3300032089|Ga0318525_10160983All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1153Open in IMG/M
3300033433|Ga0326726_10805274All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300034090|Ga0326723_0097158All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1272Open in IMG/M
3300034165|Ga0364942_0198646All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales654Open in IMG/M
3300034820|Ga0373959_0141578All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales602Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil12.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil7.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.00%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.00%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment2.00%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.00%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil2.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.00%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.00%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil2.00%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.00%
Salt Marsh SedimentEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment1.00%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil1.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.00%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.00%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002120Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006578Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006865Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaGEnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011441Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012668Arctic soils microbial communities. Combined Assembly of 23 SPsEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015195Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)EnvironmentalOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300017944Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MGEnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025174Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3EnvironmentalOpen in IMG/M
3300025310Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025313Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027669Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031652Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-40EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M
3300034165Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17EnvironmentalOpen in IMG/M
3300034820Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10285854123300000956SoilMYVRVTTFNVDPARLPELTAKIEEMTPRAKALPGIVDVYVAWRADGRGVLVAIYQSKEAAGRAVARVQALWGNLAGLVSSAPRVDAYESAQRLTG*
C687J26616_1000743723300002120SoilMYARVTTFKVDPSRLNELAAKIEEMAPRAKALPGMVDAYGMWRGDGQGVVVAVYRSKADADAAVARIQAIWGDLVGLLSGAPKTDTYENVAHITG*
Ga0062595_10079253013300004479SoilMYARVTNFKVDPSRLSELSAKIKEMGPRAKALPGMVDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLSGAPKTDAYENAAHITG*
Ga0066678_1110717213300005181SoilMYARVTNFKVDPSRLSELSAKIKEMGPRAKALPGMVDAYAAWRADGQGVVVALYESKDAADRAVARIQAIWGDLAGL
Ga0066388_10042074923300005332Tropical Forest SoilMYARLTHFKVDPSRLPELSAKIEEMGPRAKALPGMIDVYVAWRPDGQGVVVALYESKGAADRAVTRIEALWGDLVNMLSSAPRTEVYAHAEHVTR*
Ga0066388_10196741123300005332Tropical Forest SoilMYARVTQFQVDPSRLPELSAKIKQMGPLAKALPGMIDAYAAWRPDGQGLIVALYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVYAHVERITR*
Ga0066388_10472979213300005332Tropical Forest SoilRVTHFKVDPSRLPELSAKINEMGPRAKALPGMIDAYVAWRADGQGVVVALYESKGAADRAVSRIQALWGDLVDLLSSAPRTDVYANAERIPR*
Ga0066388_10793749313300005332Tropical Forest SoilMYARVTTFKVDPSRVPELTAKIKEMGPRAKALPGMIDAYAAWRGDGQGVVVALYKSKADADRAVQRIQALWGDLAGLLSGAPRTDAYETAERITG*
Ga0068868_10038785523300005338Miscanthus RhizosphereMYARVTNFKVDPSRLSELSAKIKEMGPRAKALPGMVDAYAAWRADGQGVVVALYESREAADRAVARIQAIWGDLAGLLSGAPKTDAYENAAHITG*
Ga0070659_10164211213300005366Corn RhizosphereMYARVTNFKVDPSRLSELSAKIKEMGPRAKALPGMVDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLSGAPKTDAYENA
Ga0070709_1106437013300005434Corn, Switchgrass And Miscanthus RhizosphereMYARVTQFQVDPSRLPELSAKIKEMGPLAKALPGMIDAYAAWRPDGQGVIVALYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVYAHAEHITR*
Ga0070705_10024770123300005440Corn, Switchgrass And Miscanthus RhizosphereMYARVTNFKVDPSRLSELSAKIKEMGPRAKALPGLVDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLSGAPKTDAYENAAHITG*
Ga0070741_1003208943300005529Surface SoilVYVRVTAFKVDPARLAELPAKVEEMAPRIKALPGMVDAYTAWRGDGQGVVVAVYESKEAADKAVARIQALWGGLAGLVSTAPRTDAYDSVAHLTG*
Ga0070741_1004296753300005529Surface SoilMYVRVTAFKVDAERLPELSAKVEEVGPRAKALPGMVDAYVAWRGDGQGVLVAIYRNKASADAAVARIQAIWGSLAGLVSGAPRTDAYENAAHLTA*
Ga0070741_1126656323300005529Surface SoilVYVRVTAFKVDPARLAELPAKVEEMAPRVKALPGMVDAYTAWRGDGQGVVVAVYESKEAADKAVARIQALWGGLAGLVSTAPRTDAYDSVAHLTD*
Ga0066670_1065502813300005560SoilMYARVTNFKVDPSRLSELSAKIKEMGPRAKALPGMIDAYAAWRADGQGVVVALYESREAADRAVARIQAIWGDLAGLLSGAPKTDAYETAAHVTA*
Ga0066699_1123428013300005561SoilMYARVTNFKVDPSRLSELSAKIKEMGPRAKALPGMIDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLNGAPKTDGYENAAHITG*
Ga0066905_10017655613300005713Tropical Forest SoilPMYARVTQFQVDPSRLPELSAKIKQMGPLAKALPGMIDAYAAWRPDGQGLIVALYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVYAHAEHITR*
Ga0066905_10231904723300005713Tropical Forest SoilMYARVTTFKVDPARLEELSAKIKEMGPRAKALPGMVDAYAAWRGDGQGVVVAIYQSKASADAAVARIQALWGDLAGLLSGAPRTDAFENAAHITG*
Ga0066903_10087146923300005764Tropical Forest SoilMYARVTQFQVDPSRLPELSAKIKEMGPLAKALPGMIDAYAAWRPDGQGVIVALYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVYAHVEHITR*
Ga0066652_10049479023300006046SoilMYARVTNFKVDPSRLSELSAKIEEMGPRAKALPGMVDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLSGAPKTDAYENAAHITG*
Ga0074059_1215715413300006578SoilARVTNFKVDPSRLSELSAKIEEMGPRAKALPGMVDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLSGAPKTDAYENAAHITG*
Ga0066653_1030639823300006791SoilMYARVTSFNVDPSRLPDLSAKIKEMGPRAKALPGMVDAYAAWRSDGQGVVVALYGDKDAADRAVARIQALLGDLAGLLSGAPRTDAYENAAHLTG*
Ga0066658_1046183723300006794SoilMYARVTNFKVDPSRLSELSAKIKEMGPRAKTLPGMVDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLSGAPKTDAYENAAHITG*
Ga0073934_1000265893300006865Hot Spring SedimentMYARVTAFKVDPSRLPELSAKIAEMGPRAKALPGIVDAYAAWRGDGQGVVVALYQSKEAADSAVARIQALWGDLAGLLSGAPRTDVYETAVRITA*
Ga0114129_1069952823300009147Populus RhizosphereMYARVTTFKVDPSRLNELATKIEEMTPRAKALPGIVDAYGVWRGDGQGVVVAIYSSKAAADAAVARIQALWGDLAGLLSSAPRTDIYENVAHIAG*
Ga0114129_1112660023300009147Populus RhizosphereMYARVTTFKVDPARLPELSAKIKEMGPRAKALPGMVDAYAAWRGDGQGVVVAIYQSKASADAAVARIQALWGDLVGLLNGAPKTDAYEDAAHITG*
Ga0105243_1249422223300009148Miscanthus RhizosphereSELSAKIKEMGPRAKALPGMVDAYAAWRADGQGVVVALYESKEDADRAVARIQALWGDLAGLLSGAPKTDAYENAAHITG*
Ga0105248_1043487223300009177Switchgrass RhizosphereMYARVTNFKVDPSRLSELSAKIKEMGPRAKALPGMVDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLSGAPKTDAYENAVHITG*
Ga0105249_1217672613300009553Switchgrass RhizosphereMYARVTNFKVDPSRLSELSAKIKEMGPRAKALPGMIDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLSGAPKTDAYENAAHITG*
Ga0126374_1024181823300009792Tropical Forest SoilMYARVTQFQVDPSRLPELSAKIKQMGPLAKALPGMIDAYAAWRPDGQGLIVALYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVYAHVEHITR*
Ga0126374_1110138923300009792Tropical Forest SoilSRLPELSAKIKQMGPPAKTLPGMIDVYAAWRADGQGVVVALYQSKGDADRAVTRIQALWGDLVLLLSGAPRTDVYENAEHVTR*
Ga0126380_1060371913300010043Tropical Forest SoilMYARVTQFQVDPSRLPELSAKIKQMGPLAKALPGMIDAYAAWRPDGQGLIVALYESKAAADRAVMRIQALWGDVVNLLSGAPRTDVYAHAEHITR*
Ga0126384_1129928913300010046Tropical Forest SoilMYARVTQFQVDPSRLPELSAKIKQMGPLAKALPGMIDAYAAWRPDGQGLIVALYESKAAADRAVMRIQALWGDLVNLLSDAPRTDVYAHVEHITR*
Ga0126382_1014644923300010047Tropical Forest SoilMYARVTQFQVDPARLPELSAKIKEMGPLAKALPGMIDAYAAWRPDGQGVIVALYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVYAHAEHITR*
Ga0126373_1072379913300010048Tropical Forest SoilMYARVTQFQVDPSRLPELSAKIKEMGPLAKALPGMIDAYAAWRPDGQGLIVALYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVYAHVEHITR*
Ga0126370_1065671113300010358Tropical Forest SoilMYARVTQFQVDPSRLPELSAKIKQMGPLAKALPGMIDAYAAWRPDGQGLIVALYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVYAHAEHITR*
Ga0126376_1181363813300010359Tropical Forest SoilDPARLPELAAKIKEMGPSAKTLPGMIDAYAAWRADGQGVVVALYQSKGAADRAVTRIQALWGDLANLLSGAPRTDVYENARHITR*
Ga0126377_1058354323300010362Tropical Forest SoilMYARVTQFQVDPSRIPELSAKIKEMGPLAKALPGMIDVYAAWRTDGQGVIVAFYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVYAHAEHITR*
Ga0126379_1022522623300010366Tropical Forest SoilMYARVTQFQVDPSRLPELSAKIKQMGPLAKALPGMIDAYAAWRPDGQGLIVALYESKAAADRAVTRIGALWGDLVNLLSGAPRTDVYAHVEHITR*
Ga0134125_1116855823300010371Terrestrial SoilMYARVTSFKVDPARVAELSAKIAEMGPRAKRLPGMVDAYAAWRADGEGVVVALYESKEAADRAVTRLPALWGDLVGLLAGAPRTDTYDTAAHLTG*
Ga0134124_1121793523300010397Terrestrial SoilMYARVTNFKVDPSRLSELSAKIKEMGPRAKALPGMVDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLSGAPKTDAYE
Ga0134124_1282345713300010397Terrestrial SoilARLQELPAKIKEMGPRAKALPGMVDAYAAWRGDGQGVVVAIYRSKEDADRAVARIQALWGDLAGLLSGAPKTDAYETAAHVTA*
Ga0126383_1119448623300010398Tropical Forest SoilQVDPSRLPELSAKIKQMGPLAKALPGMIDAYAAWRPDGQGLIVALYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVYAHVEHITR*
Ga0134121_1269963123300010401Terrestrial SoilMYVRVTAFKVDPSRLPELSAKVDEMRPLAKALPGMIDAYAAWRGDGQGVVVAVYQSKQAADAAVARIQAIWGSLAGLVSGAPR
Ga0137452_122536723300011441SoilRLQEVSEKIAEMGPRAKALPGMIDVYAAWRGDGQGVVVAIYRSKEDADRAVARIQAMWGHLAGLLSGAPRTDAYEHAAHVTA*
Ga0137364_1134400423300012198Vadose Zone SoilMYARVTNFKVDPSRLSELSAKIKEMGPRAKALPGMVDAYAAWRADGQGVVVALYESREAADRAVARIQAIWGDLAGLLSGAPKTDAYE
Ga0157216_1009404323300012668Glacier Forefield SoilMYARVTTFKVDPARVAELSAKVVEMAPRAKALPGIVDVYVAWRADGQGVLVGIYQSKEAADRAVARIQALWGNLAGLVTGAPRIDAYETAERLTG*
Ga0137404_1138718413300012929Vadose Zone SoilELSAKIKEMGPRAKALPGMVDAFAAWRADGQGVVVALYENKEAADRAVARIQALWGDLVGLLSGAPRTDVYESAEHITG*
Ga0126375_1025583813300012948Tropical Forest SoilMYARVTQFQVDPARLPELSAKIKEMGPLAKALPGMIDAYAAWRPDGQGVIVALYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVYAHAEH
Ga0164303_1049238913300012957SoilARVTNFKVDPSRLSELSAKIEEMGPRAKALPGMVDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLSGAPKTDAYQNAAHITG*
Ga0164299_1052185613300012958SoilMYARVSNFKVDPSRLSELSAKIEEMGPRAKALPGMVDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLSGAPKTDAYENAAHITG*
Ga0157378_1031603123300013297Miscanthus RhizosphereMYARVTSFKVDPSRLPELSAKIKEMGPRAKALPGMVDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLSGAPKTDAYENAAHITG*
Ga0157380_1041405523300014326Switchgrass RhizosphereMYARVTSFKVDPSRLPELSAKIKEMGPRAKALPGMVDAYAAWRADGQGVVVALYEDKAAADRAVARIQALWGDLVGLLSGAPRTDAYETAARITG*
Ga0157380_1225772713300014326Switchgrass RhizosphereNFKVDPSRLPELSAKVKEMGPRVKALPGMIDAYAAWRADGQGVVVALYESKEAADRVVARIQALFGSLAGLLSGAPRTDVYENAEHITR*
Ga0167658_100909413300015195Glacier Forefield SoilMYVRVTSFKVDPARLPELSAKIEEMGPRAKALPGIIDAYAAWRADGQGVLVAIYQNKETADAAVARIQAIWGNLAGLVSVAPRTDAYENAAHITA*
Ga0173478_1082550313300015201SoilMYARVTNFKVDPSRLPELSAKVKEMGPRVKALPGMIDAYAVWRADGQGVVVALYESKEAADRVVARIQALFGSLAGLLSGAPRTDVYENAEHITG*
Ga0137403_1111290723300015264Vadose Zone SoilTSFKVDPSRLPELSAKIKEMGPRAKALPGMVDAFAAWRADGQGVVVALYENKEAADRAVARIQALWGDLVGLLSGAPRTDVYESAEHITG*
Ga0132258_1028820133300015371Arabidopsis RhizosphereMYARVTQFQVDPARLPELSAKIKEMGPLAKALPGMIDVYAAWRPDGQGVIVALYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVYAHVEHITR*
Ga0132257_10084036323300015373Arabidopsis RhizosphereMYARVTQFQVDPARLPELSAKIKEMGPLAKALPGMIDVYAAWRPDGQGVIVALYESKAAADRAVMRIQALRGDLVNLLSGAPRTDVYAHVEHITR*
Ga0132255_10083700013300015374Arabidopsis RhizosphereETAARVTNFKVDPSRLSELSAKIKEMGPRAKALPGMVDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLSGAPKTDAYENAAHITG*
Ga0182036_1070186023300016270SoilMYARVTQFQVDPSRLPELSAKIKEMGPLAKALPGMIDAYAAWRADGQGVIVAIYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVYA
Ga0182035_1003942233300016341SoilMYARVTQFQVDPSRLPELSAKIKKMGPLAKALPGMIDAYAAWRADGQGVIVAIYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVYAHAEHIT
Ga0187786_1001299033300017944Tropical PeatlandMYARVTSFKIDPARLGELDAKIKQMLPRTKALPGMVNAYGAWRGDGQGVVVAIYRSKADADAAVVRLQAIWGDLAGLLVSAPRTDTYDNVAHIGD
Ga0187788_1017308423300018032Tropical PeatlandMYARVTAFKVDPSRLGELEAKIKVMAPRAKALPGMIDAYGVWRADGQGVVVAVYRSKADADAAVGRLPAIWGDFVGLLSGAPRTDIYDNVVHITG
Ga0184632_1019805723300018075Groundwater SedimentMYARVTTFKVDPSRLNELEAKIKEMAPRAKALPGMVDAYGVWRGDGQGVVVAVYRSKVDADAAVARIQAIWGDLVGLLSGAPKTDTYENVAHITG
Ga0184612_1035091213300018078Groundwater SedimentMYARVTTFKVDPSRLNELDAKIKEMAPRAKALPGMVDAYGVWRGDGQGVVVAVYRSKADADAAVARIQAIWGDLVGLLSGAPKTDTYENVAHITG
Ga0190265_1014520623300018422SoilMYARVTSFKVDPSRLPELSAKIEEMRPRAKALPGMVDAYAAWRADGQGVVVALYENKEAADRAVARIQALWGNLAGLLSGAPRTDAYETAERITR
Ga0190272_1004673223300018429SoilMYARVTTFKVDPARVAELSAKVVEMAPRAKALPGIVDVYVAWRADGQGVLVGIYQSKEAAERAVARIQALWGNLAGLVTGAPRIDAYETAERLTG
Ga0066662_1188570113300018468Grasslands SoilMYARVTNFKVDPSRLSELSAKIKEMGPRAKALPGMVDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLSGAPKTDAYENAAHI
Ga0190274_1027807623300018476SoilLPELSAKVKEMGPRVKALPGMIDAYAAWRADGQGVVVALYESKEAADRVVARIQALFGSLAGLLSGAPRTDVYENAEHITG
Ga0066669_1035782123300018482Grasslands SoilMYARVTNFKVDSSRLSELSAKIEEMGPRAKALPGMVDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLSGAPKTDAYENAAHITG
Ga0190264_1047283913300019377SoilMYARVTTFKVDPARVAELSAKVEEMAPRAKALPGIVDVYVAWRADGQGVLVGIYQSKEAAERAVARIQALWGNLAGLVTGAPRIDAYETAERLTG
Ga0210406_1137924113300021168SoilVDPSRLPELSAKIKEMGPLAKALPGMIDAYAAWRPDGQGVIVALYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVYAHAEHITR
Ga0137417_134132523300024330Vadose Zone SoilMYARVTSFKVDPSRLPELSAKIKEMGPRAKALPGMVDAYAAWRADGQGVVVALYGNKEAADRAVTRIQPIWGDLAGLLSGAPKTDAYETAAHITG
Ga0179591_110835033300024347Vadose Zone SoilMYARVTNFKVDPSRLAELSAKIKEMGPRAKALPGMVDAYAAWRADGQGVVVALYENKEAADRAVARIQALWGDLVGLLSGAPRTDAYESAEHIT
Ga0209324_1066599413300025174SoilGEVGDVEQEALAELATREALEEMAPRAKALPGMVDAYGMWRGDGQGVVVAVYRSKADADAAVARIQAIWGDLVGLLSGAPKTDTYENVAHITG
Ga0209172_10000430393300025310Hot Spring SedimentMYARVTAFKVDPSRLPELSAKIAEMGPRAKALPGIVDAYAAWRGDGQGVVVALYQSKEAADSAVARIQALWGDLAGLLSGAPRTDVYETAVRITA
Ga0209431_1001821623300025313SoilMYARVTTFKVDPSRLNELAAKIEEMAPRAKALPGMVDAYGMWRGDGQGVVVAVYRSKADADAAVARIQAIWGDLVGLLSGAPKTDTYENVAHITG
Ga0207662_1011914823300025918Switchgrass RhizosphereMYARVTNFKVDPSRLSELSAKIKEMGPRAKALPGMVDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLSGA
Ga0207687_1041802713300025927Miscanthus RhizosphereMYARVTNFKVDPSRLSELSAKIKEMGPRAKALPGMVDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLSGAPKTDAYENAAHITG
Ga0208981_112483223300027669Forest SoilTMYARVTSFKVDPSRLPELAAKVKEMGPRARALPGMVDAYAAWRGDGQGVVVALYENKEAADRTVGRIQALWGDLAGLVSGAPRTDAYENAEHITG
Ga0209382_1020099213300027909Populus RhizosphereELPAKVAEMAPRAKKLPGVVDIYAAWRSDGQGVVVALYESKEAADRAVARIQALWGNLAGLLSGAPRTDIYETAEHLTA
Ga0268264_1249962023300028381Switchgrass RhizosphereMYARVTNFKVDPSRLSELSAKIKEMGPRAKALPGMVDAYAAWRADGQGVVVALYESKEAADRAVARIQAIWGDLAGLLS
Ga0307504_1035930923300028792SoilMYVRVTAFKVDPSRLHELMAKVDEMRPRAKALPGMVDAYAAWRADGQGVLVGIYQSKEAADAAVARIQAIWGSLAGLVSGAPRIDAYENAAHLTA
Ga0318534_1042054413300031544SoilMYARVTQFQVDPSRLPELSAKIKKMGPLAKALPGMIDAYAAWRADGQGVIVAIYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVYAHAEHITG
Ga0318515_1016449423300031572SoilMYARVTQFQVDPSRLPELSAKIKEMGPLAKALPGMIDAYAAWRADGQGVIVAIYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVYAHAEHITG
Ga0315553_1004699723300031652Salt Marsh SedimentMYARVTNFKIDPSRLSELEAKAKEMAPRAKALPGMVDAYCAWRGDGQGVMVAVYRSKADADAAVGRIQAIWGDLAGLLSGAPRTDTYDNVAHVTE
Ga0318542_1018762123300031668SoilMYARVTQFQVDPSRLPELSAKIKEMGPLAKALPGMIDAYAAWRADGQGVIVAIYESKAAADRAVMRIQALWGDLVNLL
Ga0318574_1066033823300031680SoilFKVDPARLTELAAKIKEMGPSAKTLPGMIDAYAAWRADGQGVVVALYQSKGAADRAVTRIQALWGDLVNLLSGAPRTDVYENAEHITR
Ga0306917_1110646913300031719SoilMYARVTQFQVDPSRLPELSAKIKEMGPLAKALPGMIDAYAAWRADGQGVIVAIYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVY
Ga0318512_1053763813300031846SoilMYARVTQFQVDPSRLPELSAKIKEMGPLAKALPGMIDAYAAWRADGQGVIVAIYESKAAADRAVMRIQALWGDLVNLLSGAPRTDVYAHAEHITR
Ga0306919_1138958713300031879SoilVDPARLTELAAKIKEMGPSAKTLPGMIDAYAAWRADGQGVVVALYQSKGAADRAVTRIQALWGDLVNLLSGAPRTDVYENAEHITR
Ga0318536_1028218123300031893SoilKVDPARLTELAAKIKEMGPSAKTLPGMIDAYAAWRADGQGVVVALYQSKGAADRAVTRIQALWGDLVNLLSGAPRTDVYENAEHITR
Ga0214473_1036533223300031949SoilMYARVTTFKVDPSRLNELAAKIEEMAPRAKALPGMVDAYGVWRGDGQGVVVAVYRSKADADAAVARIQAIWGDLVGLLSGAPKTDTYENVAHITG
Ga0318525_1016098313300032089SoilMYARVTQFQVDPSRLPELSAKIKEMGPLAKALPGMIDAYAAWRADGQGVIVAIYESKAAADRAVMRIQALWGDLVNLLSGAPRTDAYAHAEHITG
Ga0326726_1080527413300033433Peat SoilMYARVTNFKVDPSRLAELSAKVKEMGPRAKALPGMVDAYAAWRADGQGVVVALYENKEAADRAVARVQALWGDLAGLLSGA
Ga0326723_0097158_98_3853300034090Peat SoilMYARVTNFKVDPSRLAELSAKVKEMGPRAKALPGMVDAYAAWRADGQGVVVALYENKEAADRAVARIQALWGDLAGLLSGAPRTDAYESAEHITG
Ga0364942_0198646_243_5303300034165SedimentMYARVTTFKVDPSRLNELAAKIEEMAPRAKALPGMVDAYGVWRGDGQGVIVAVYRSKADADAAVARIQAIWGDLVGLLSGAPKTDTYENVAHITG
Ga0373959_0141578_3_2393300034820Rhizosphere SoilMYARVTSFKVDPARLPELSAKVKEMAPRVKALPGMVDAYAAWRSDGQGVVVALYESKEAADRVVARIQALFGGLAGLLS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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