NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F105033

Metagenome / Metatranscriptome Family F105033

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F105033
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 74 residues
Representative Sequence MSRTYRNLEGINRCALRHPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLSNCPTANYDKVVSGYYQEDYKPA
Number of Associated Samples 58
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 71.00 %
% of genes near scaffold ends (potentially truncated) 30.00 %
% of genes from short scaffolds (< 2000 bps) 60.00 %
Associated GOLD sequencing projects 54
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (45.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(24.000 % of family members)
Environment Ontology (ENVO) Unclassified
(40.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(45.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 47.57%    β-sheet: 0.00%    Coil/Unstructured: 52.43%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF03330DPBB_1 7.00
PF04851ResIII 4.00
PF11753DUF3310 3.00
PF07728AAA_5 3.00
PF05050Methyltransf_21 2.00
PF136402OG-FeII_Oxy_3 2.00
PF04724Glyco_transf_17 2.00
PF00805Pentapeptide 1.00
PF02604PhdYeFM_antitox 1.00
PF16805Trans_coact 1.00
PF07484Collar 1.00
PF00149Metallophos 1.00
PF00111Fer2 1.00
PF01050MannoseP_isomer 1.00
PF00383dCMP_cyt_deam_1 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG1357Uncharacterized conserved protein YjbI, contains pentapeptide repeatsFunction unknown [S] 1.00
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 1.00
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms55.00 %
UnclassifiedrootN/A45.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001968|GOS2236_1015923All Organisms → Viruses → Predicted Viral1135Open in IMG/M
3300001968|GOS2236_1020791All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae940Open in IMG/M
3300001968|GOS2236_1058227All Organisms → Viruses → Predicted Viral1720Open in IMG/M
3300001968|GOS2236_1065118All Organisms → Viruses → Predicted Viral1451Open in IMG/M
3300002835|B570J40625_101065662Not Available685Open in IMG/M
3300003413|JGI25922J50271_10000447Not Available12129Open in IMG/M
3300003430|JGI25921J50272_10001024Not Available9302Open in IMG/M
3300003430|JGI25921J50272_10011101All Organisms → Viruses → Predicted Viral2647Open in IMG/M
3300004096|Ga0066177_10194812All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01828Open in IMG/M
3300005758|Ga0078117_1058674All Organisms → Viruses → Predicted Viral4273Open in IMG/M
3300005758|Ga0078117_1091134All Organisms → Viruses → Predicted Viral1119Open in IMG/M
3300005805|Ga0079957_1104560Not Available1535Open in IMG/M
3300005805|Ga0079957_1234984Not Available860Open in IMG/M
3300005805|Ga0079957_1235470Not Available859Open in IMG/M
3300006030|Ga0075470_10000070All Organisms → Viruses35992Open in IMG/M
3300006030|Ga0075470_10009811All Organisms → Viruses → Predicted Viral2948Open in IMG/M
3300006030|Ga0075470_10016483All Organisms → Viruses → Predicted Viral2285Open in IMG/M
3300006030|Ga0075470_10025630All Organisms → Viruses → Predicted Viral1826Open in IMG/M
3300006641|Ga0075471_10001108All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes17381Open in IMG/M
3300006641|Ga0075471_10001360Not Available16005Open in IMG/M
3300006641|Ga0075471_10054938All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae2207Open in IMG/M
3300006641|Ga0075471_10072561All Organisms → Viruses → Predicted Viral1880Open in IMG/M
3300006641|Ga0075471_10437319Not Available653Open in IMG/M
3300006802|Ga0070749_10039457All Organisms → Viruses → Predicted Viral2907Open in IMG/M
3300006802|Ga0070749_10092262All Organisms → Viruses → Predicted Viral1798Open in IMG/M
3300006875|Ga0075473_10050684All Organisms → Viruses → Predicted Viral1606Open in IMG/M
3300006875|Ga0075473_10062210All Organisms → Viruses → Predicted Viral1453Open in IMG/M
3300007169|Ga0102976_1101980All Organisms → Viruses → Predicted Viral2375Open in IMG/M
3300007538|Ga0099851_1100996Not Available1099Open in IMG/M
3300007541|Ga0099848_1039233All Organisms → Viruses1943Open in IMG/M
3300008055|Ga0108970_11668095Not Available1378Open in IMG/M
3300008107|Ga0114340_1000835Not Available21661Open in IMG/M
3300008113|Ga0114346_1003756All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes15627Open in IMG/M
3300008113|Ga0114346_1261759Not Available632Open in IMG/M
3300009165|Ga0105102_10643934Not Available590Open in IMG/M
3300009223|Ga0103850_1040820Not Available560Open in IMG/M
3300010354|Ga0129333_10007279All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes10452Open in IMG/M
3300010354|Ga0129333_10008083Not Available9913Open in IMG/M
3300010354|Ga0129333_10011038All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae8551Open in IMG/M
3300010354|Ga0129333_10014400Not Available7521Open in IMG/M
3300010354|Ga0129333_10023879Not Available5799Open in IMG/M
3300010354|Ga0129333_10073521All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae3175Open in IMG/M
3300010354|Ga0129333_10091334All Organisms → Viruses → Predicted Viral2816Open in IMG/M
3300010354|Ga0129333_10228828All Organisms → Viruses → Predicted Viral1684Open in IMG/M
3300010354|Ga0129333_10497860All Organisms → Viruses → Predicted Viral1068Open in IMG/M
3300010354|Ga0129333_10703850Not Available868Open in IMG/M
3300010354|Ga0129333_11503037Not Available552Open in IMG/M
3300010370|Ga0129336_10506756Not Available650Open in IMG/M
3300011268|Ga0151620_1005173Not Available4840Open in IMG/M
3300011268|Ga0151620_1005371Not Available4759Open in IMG/M
3300011268|Ga0151620_1006680All Organisms → Viruses → Predicted Viral4214Open in IMG/M
3300012706|Ga0157627_1054830Not Available522Open in IMG/M
3300013004|Ga0164293_10135085All Organisms → Viruses → Predicted Viral1851Open in IMG/M
3300017766|Ga0181343_1000342Not Available21512Open in IMG/M
3300020549|Ga0207942_1011677All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM011162Open in IMG/M
3300020569|Ga0208229_1044130Not Available656Open in IMG/M
3300020570|Ga0208465_1041505All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01585Open in IMG/M
3300021961|Ga0222714_10052945Not Available2798Open in IMG/M
3300021961|Ga0222714_10066004All Organisms → Viruses2420Open in IMG/M
3300021962|Ga0222713_10579961Not Available658Open in IMG/M
3300021964|Ga0222719_10817756All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01510Open in IMG/M
3300024536|Ga0256338_1120863Not Available587Open in IMG/M
3300024570|Ga0255276_1188289Not Available532Open in IMG/M
3300024572|Ga0255268_1150730Not Available577Open in IMG/M
3300024573|Ga0256337_1103835Not Available711Open in IMG/M
3300024857|Ga0256339_1077854Not Available689Open in IMG/M
3300024865|Ga0256340_1172354Not Available517Open in IMG/M
3300024867|Ga0255267_1079403Not Available760Open in IMG/M
3300025585|Ga0208546_1000023All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes87156Open in IMG/M
3300025585|Ga0208546_1109303Not Available614Open in IMG/M
3300025732|Ga0208784_1000090Not Available40745Open in IMG/M
3300025732|Ga0208784_1000265All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes26791Open in IMG/M
3300025732|Ga0208784_1000547All Organisms → Viruses18100Open in IMG/M
3300025732|Ga0208784_1018883All Organisms → Viruses2259Open in IMG/M
3300025732|Ga0208784_1022024Not Available2070Open in IMG/M
3300025732|Ga0208784_1023483All Organisms → Viruses → Predicted Viral1996Open in IMG/M
3300025889|Ga0208644_1354762Not Available558Open in IMG/M
3300026570|Ga0255274_1189681Not Available512Open in IMG/M
3300026571|Ga0255289_1032917Not Available1177Open in IMG/M
3300027769|Ga0209770_10102553All Organisms → Viruses → Predicted Viral1178Open in IMG/M
3300028286|Ga0256331_1127214Not Available576Open in IMG/M
3300029930|Ga0119944_1001127All Organisms → Viruses → Predicted Viral4771Open in IMG/M
3300029930|Ga0119944_1004463All Organisms → Viruses → Predicted Viral2287Open in IMG/M
3300029930|Ga0119944_1004683All Organisms → Viruses → Predicted Viral2223Open in IMG/M
3300029930|Ga0119944_1011837All Organisms → Viruses → Predicted Viral1287Open in IMG/M
3300031758|Ga0315907_10190521All Organisms → Viruses → Predicted Viral1723Open in IMG/M
3300031784|Ga0315899_10149890All Organisms → Viruses → Predicted Viral2379Open in IMG/M
3300031787|Ga0315900_11033525Not Available536Open in IMG/M
3300031857|Ga0315909_10069250All Organisms → Viruses → Predicted Viral3164Open in IMG/M
3300031951|Ga0315904_10398416All Organisms → Viruses → Predicted Viral1248Open in IMG/M
3300031951|Ga0315904_10531644All Organisms → Viruses → Predicted Viral1029Open in IMG/M
3300033482|Ga0316627_100456465All Organisms → Viruses → Predicted Viral1119Open in IMG/M
3300033482|Ga0316627_100950872All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01829Open in IMG/M
3300033488|Ga0316621_10724351All Organisms → Viruses721Open in IMG/M
3300033488|Ga0316621_11175264Not Available579Open in IMG/M
3300033521|Ga0316616_101428242Not Available893Open in IMG/M
3300033557|Ga0316617_100123122All Organisms → Viruses1897Open in IMG/M
3300034061|Ga0334987_0018727All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes6265Open in IMG/M
3300034118|Ga0335053_0762040Not Available538Open in IMG/M
3300034283|Ga0335007_0068127All Organisms → Viruses → Predicted Viral2703Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous24.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient12.00%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater10.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake6.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater6.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil6.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater5.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater4.00%
AquaticEnvironmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic4.00%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine4.00%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water4.00%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton3.00%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake3.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater3.00%
Lake WaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water2.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.00%
River WaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water1.00%
EstuaryHost-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary1.00%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001968Marine microbial communities from Lake Gatun, Panama - GS020EnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003413Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DDEnvironmentalOpen in IMG/M
3300003430Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SDEnvironmentalOpen in IMG/M
3300004096Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)EnvironmentalOpen in IMG/M
3300005758Cyanobacteria communities in tropical freswater systems - freshwater lake in SingaporeEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006030Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006641Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006875Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300007169Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Bottom layer) 8 sequencing projectsEnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300008055Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393Host-AssociatedOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300009165Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009223Microbial communities of water from Amazon river, Brazil - RCM3EnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300011268Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555EnvironmentalOpen in IMG/M
3300012706Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES159 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300020549Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020569Freshwater microbial communities from Lake Mendota, WI - 22AUG2011 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020570Freshwater microbial communities from Lake Mendota, WI - 31AUG2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300024536Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepC_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024570Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepB_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024572Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepB_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024573Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepA_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024857Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepA_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024865Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepC_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024867Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepA_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025585Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025732Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300026570Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepB_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300026571Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepB_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027769Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)EnvironmentalOpen in IMG/M
3300028286Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029930Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031784Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033488Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_CEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300034061Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028EnvironmentalOpen in IMG/M
3300034118Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165EnvironmentalOpen in IMG/M
3300034283Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GOS2236_101592323300001968MarineMARTYRNLEGMNRCALRNPKTANERKNIIGLINDINVEGYEISGLNHLHHRLSNCPTANYDKVVSGYYQEDYKVS*
GOS2236_102079133300001968MarineMARTYRNLEGMNRCALRKPKTANERKHIIGLINDNYVEGYEISGLNHLHHRLANCPTAWDDQVISGYYQQDYKAS*
GOS2236_105822743300001968MarineMSRTYRNLNGINKCALRHPKTANERKTLIGLLQDNYVEEYEISGLNHLHHRLSNCPTANYDKVVSGYYQEDYKVS*
GOS2236_106511843300001968MarineMSRTYRKIDYIGNCALRHPKTSNERKHLIGILQDNQYEDYQISGLNHLQHRLSNCPTANYDRVVSGYLQEDYKF*
B570J40625_10106566213300002835FreshwaterMSRTYRNLEGINRCALRNPKTSNERKHLIGILKDNQYEDYQVSGLNHLHHRLSNCPTANYDKVISGYYQEDYNIA*
JGI25922J50271_1000044723300003413Freshwater LakeMSRTYRNLEGMNRCALRNPRTSNERKSLIGLLQDINVEEYEISGLNHLHHRLSNCPTANYDKVISAYYEGDYKFXNPP*
JGI25921J50272_10001024133300003430Freshwater LakeMSRTYRNLEGINRCALRKPKTANERKTLIGLLQDNYAEEYEISGLNHLHHRLSNCPTANYDKVISGYYEQDYKI*
JGI25921J50272_1001110133300003430Freshwater LakeMSRTYRNLEGINRCALRNPKTSNERKHLIGILQDNQYEDYQVSGLNHLHHRLSNCPTANYDKVISGYYQEDYNIA*
Ga0066177_1019481223300004096Freshwater LakeMSRTYRNLEGMNRCALRNPRTSNERKSLIGLLQDINVEEYEISGLNHLHHRLSNCPTANYDKVISAYYEGDYKF*
Ga0078117_105867423300005758Lake WaterMARTYRNLNGMNRCALRNPKTTNERKALMSLLQDIRTEDYEISGVNHLQRRLSRCPTAWDDLIVSGYREAKI*
Ga0078117_109113413300005758Lake WaterMSRTYRKIDYISKCALRHPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLSHCPTANYDKVVSGYYQEDYKTA*
Ga0079957_110456023300005805LakeMSRTYRNLNGINHCALRHPKTANERKHLIGILQDNQYEDYSISGLNHIQHRLSNCPTANYDKVVSGYYQEDYNF*
Ga0079957_123498443300005805LakeMSRTYRNIDYIGKSALRHPKTSNERKHLIGILQDSYVEDYQISGLNHLHHRLSNCPTANYDKVV
Ga0079957_123547023300005805LakeMSRTHRNIENIGRCALRHPKTSNERKNLIGILQDNQYEDYQISGINHLHHRLSNCPTAWDDKVVSAYYQEDYDVG*
Ga0075470_10000070233300006030AqueousMSRTWRKIDYIGKCALRHPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLTNCPTANYDRVVSGYLQEDYKMI*
Ga0075470_1000981163300006030AqueousMSRTYRKLEGMNRCALRSPKTSNERKTLIGILQDNQYEDYQISGLNHLHHRLSHCPTANYDRVVSGYYQEDYNIA*
Ga0075470_1001648393300006030AqueousMSRTYRNLEGMNRCALRHPKTSNERKNLIGLLQDNYVEEYEISGLNHLHHRLSNCPAANYDKVVSAYYEEDYKF*
Ga0075470_1002563023300006030AqueousMSRTYRNLDGINKCALRHPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLSHCPTAYYDKVVSGYYQEDYKTA*
Ga0075471_1000110823300006641AqueousMSRTYRKIDYIGKCALRHPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLSHCPTANYDKVVSGYYQEDYKTA*
Ga0075471_1000136093300006641AqueousMSRTFRNTEGMNRCALRHPKTSNERKNLIGLLQDNYVEEYEISGLNHLHHRLSNCPTANYDKVVSAYYEEDYKF*
Ga0075471_1005493843300006641AqueousMSRTYRKIDYIGKCALRHPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLSHCPTANYDRVVSGYIEEYHK*
Ga0075471_1007256133300006641AqueousMSRTYRNLEGINRCALRHPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLSNCPTANYDKVVSGYYQEDYKPA*
Ga0075471_1043731923300006641AqueousCALRSPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLSHCPTANYDRVVSGYYQEDYKV*
Ga0070749_10039457113300006802AqueousMSRTYRNLEGMNRCALRSPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLSHCPTANYDRVVSGYYQEDYNIA*
Ga0070749_1009226213300006802AqueousIDYIGKCALRHPKTSNERKTLIGILQDNQYEDYSISGLNHLQHRLSNCPTANYDKVVSGYYQEDYKV*
Ga0075473_1005068463300006875AqueousMSRTYRNLEGMNRCALRSPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLSHCPTANYDRVVSGYYQEDYKV*
Ga0075473_1006221043300006875AqueousMSRTYRKLEGMNRCALRSPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLSHCPTANYDKVVSGYYQEDYKTA*
Ga0102976_110198033300007169Freshwater LakeMSRTYRKLEGMNRCALRSPKTSNERKTLIGILQDNQYDDYQISGLNHLHHRLSHCPTANYDKVVSGYYQEDYKF*
Ga0099851_110099623300007538AqueousMNNCALRNPKTSNERKSLIGILQDNAEENYDLSGINHLHHRLAKVPTANYDKVISGYYQQDFRIA*
Ga0099848_103923343300007541AqueousMNNFALRNPKNSNERKSLIRILPDNAEENYDLSGINHLHHRLAKVPTANYDKVISGYYQQDFRIA*
Ga0108970_1166809543300008055EstuaryRMNRCALRNPRASNERKSLIGLLQDINVEEYEISGLNHLHHRLSNCPTANYDKVISAYYEGDYKF*
Ga0114340_100083563300008107Freshwater, PlanktonMSRTYRKIDYIGKCALRHPKTSNERKHLIGILQDNQYEDYLISGLNHLHHRLSHCPTAWDDKVVSAYYEEDFKF*
Ga0114346_1003756153300008113Freshwater, PlanktonMSRTFRNTEGMNRCALRHPKTSNERKNLIGLLQDNYVEEYEISGLNHLHHRLANCPTANYDKVVSAYYEEDYKF*
Ga0114346_126175913300008113Freshwater, PlanktonMSRTHRKLDGMNKCALRHPKTSNERRNLIGILQDNMYEDYQISGLNHIHHRLSHCPTAWDDKVISGYYQEDYHLA*
Ga0105102_1064393413300009165Freshwater SedimentRCALRNPKTSNERKSLIGILQDNSEEDYDLSGINHLHHRLSKVPTANYDKVISGYYQQDFNIA*
Ga0103850_104082013300009223River WaterKIVNVIEDKKMSRTYRNLNGINKCALRHPKTSNERKTLIGLIQDNYVEEYEISVLNHLHHRLSNCPTANYDKVVSGYYQEDYKD*
Ga0129333_1000727943300010354Freshwater To Marine Saline GradientMSRTYRKLEGMNRCALRHPKTSNERRNLIGILQDIYVEDYQISGLNHLHHRLSNCPTANYDKVVSGYYQEDYNVV*
Ga0129333_10008083133300010354Freshwater To Marine Saline GradientMMSRTYRKIDYIGKCALRHPKTTNERKTLIGILQDNQYEDYSISGLNHLQHRLSNCPTANYDKVVSGYYQEDYKF*
Ga0129333_1001103873300010354Freshwater To Marine Saline GradientMARTHRNLIGINRYAFRKPKTSNERRKLISILQDNQFEEYTISGINHLHHRLSKCPTACDDIVISGYLQEDYKVS*
Ga0129333_10014400173300010354Freshwater To Marine Saline GradientMRYRINNVIEDYLMSRTYRNLEGINNCAFRHPKTSNERKNLIGILQDNFIEEYKISGVNHLHHRLSKVPTSYDDKVISGYYQEDYNIA*
Ga0129333_1002387973300010354Freshwater To Marine Saline GradientMSRTYRKIDYIGKCALRHPKTSNERKHLIGILQDNQYEDYSISGLNHLQHRLSNCPTANYDKVVSGYYQEDYKV*
Ga0129333_1007352153300010354Freshwater To Marine Saline GradientMSRTYRNLEGMNRCAFRNPKTSNERKNLIGLIQDNYVEEYEISGLNHLHHRLSKCPTAWDDKVVSAYYQQDYKI*
Ga0129333_10091334103300010354Freshwater To Marine Saline GradientMSRTYRNLEGMNRCALRNPKTSNERKSLIGLLQDINVEEYEISGLNHIHHRLSNCPTANYDKVISGYYQEDYKI*
Ga0129333_1022882833300010354Freshwater To Marine Saline GradientMSRTYRNLEGMNRCALRKPKTANERKTLIGLLQDNYAEEYEISGLNHLHHRLSNCPTANYDKVISGYYEQDYKI*
Ga0129333_1049786023300010354Freshwater To Marine Saline GradientMARTYRNLIGMNRCALRNPKTTNERKALMSLLQDIRSEEYEISGVNHLQRRLSRCPTAWDDLIVSGYREAKI*
Ga0129333_1070385023300010354Freshwater To Marine Saline GradientMARTYRNLIGMNRCALRNPRTTNERKALMSLLQDIRSEEYEISGVNHLQRRLSRCPTAWDDLIVSGYREAKI*
Ga0129333_1150303713300010354Freshwater To Marine Saline GradientGMNRCALRNPKTSNERKSLIGLLQDINVEEYEISGLNHLHHRLSNCPTANYDKVISGYYQEDYKI*
Ga0129336_1050675613300010370Freshwater To Marine Saline GradientMSRTYRNLDGINKCALRSPKTTNERKTLIGILQDNQYEDYQVSGLNHLHHRLSNCPTANYDKVISGYYQEDYNIA*
Ga0151620_1005173143300011268FreshwaterIEDYLMSRTYRNLEGINKCALRHPKTSNERKNLIGILRDNAYEDYQISGINHLHHRLCNCPTANYDKVISGYYQEDYIVA*
Ga0151620_1005371123300011268FreshwaterMSRTYRNLEGINNGAFRHPKTSNERKNLIGILQDNFMEEYKISGVNHLHHRLSKVPTSYDDKVISGYYQEDYNIA*
Ga0151620_1006680103300011268FreshwaterMSRTYRNLEGMNRCALRNPRTSNERKSLIGLLQDINVEEYEISGLNHLHHRLANCPTANYDKVVSGYFQEDYKF*
Ga0157627_105483013300012706FreshwaterKMSRTYRNLEGMNRCALRNPRTSNERKSLIGLLQDINVEEYEISGLNHLHHRLSNCPTANYDKVISAYYEGDYKF*
Ga0164293_1013508533300013004FreshwaterMSRTYRKLEGMNRCALRNPKTSNERKSLIGLLQDINFEEYEISGLNHLHHRLSNCPTANYDKVISGYYQEDYKI*
Ga0181343_1000342213300017766Freshwater LakeMSRTYRNLEGINRCALRKPKTANERKTLIGLLQDNYAEEYEISGLNHLHHRLSNCPTANYDKVISGYYEQDYKI
Ga0207942_101167753300020549FreshwaterMSRTYRNLEGMNRCALRNPRTSNERKSLIGLLQDINVEEYEISGLNHLHHRLSNCPTANYDKVISAYYEGDYKF
Ga0208229_104413013300020569FreshwaterMSRTYRNLEGINRCALRNPKTSNERKHLIGILKDNQYEDYQVSGLNHLHHRLSNCPTANYDKVISGYYQEDYNIA
Ga0208465_104150513300020570FreshwaterMSRTYRNLEGMNRCALRNPRTSNERKSLIGLLQDINVEEYEISGLNHLHHRLSNCPTANYDK
Ga0222714_1005294593300021961Estuarine WaterMSRTYRNLEGINNGAFRHPKTSNERKNLIGILQDNFMEEYKISGVNHLHHRLSKVPTSYDDKVISGYYQEDYNIA
Ga0222714_1006600453300021961Estuarine WaterMSRTYRNLEGINKCALRHPKTSNERKNLIGILRDNAYEDYQISGINHLHHRLCNCPTANYDKVISGYYQEDYIVA
Ga0222713_1057996123300021962Estuarine WaterMSRTYRKLEGMNRCALRSPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLSHCPTANYDKVVSGYYQEDYKTA
Ga0222719_1081775613300021964Estuarine WaterMSRTYRNLKGMNNCALRNPKTSNERKSLIGILQDNAEENYDLSGINHLHHRLAKVPTANYDKVISGYYQQ
Ga0256338_112086323300024536FreshwaterKLEGMNRCALRSPKTSNERKTLIGILQDNQYDDYQISGLNHLHHRLSHCPTANYDKVVSGYYQEDYKF
Ga0255276_118828913300024570FreshwaterFMSRTYRKLEGMNRCALRSPKTSNERKTLIGILQDNQYDDYQISGLNHLHHRLSHCPTANYDKVVSGYYQEDYKF
Ga0255268_115073023300024572FreshwaterMSRTYRKLEGMNRCALRSPKTSNERKTLIGILQDNQYDDYQISGLNHLHHRLSHCPTANYDKVVSGYYQEDYKF
Ga0256337_110383513300024573FreshwaterRCRIKNVIEDYLMSRTYRNLEGINKCALRHPKTSNERKNLIGILRDNAYEDYQISGINHLHHRLCNCPTANYDKVISGYYQEDYIVA
Ga0256339_107785413300024857FreshwaterRKIDYIGKCALRHPKTSNERKHLIGILQDNQYEDYQISGINHLHHRLCNCPTANYDKVISGYYQEDYIVA
Ga0256340_117235423300024865FreshwaterSRTYRKLEGMNRCALRSPKTSNERKTLIGILQDNQYDDYQISGLNHLHHRLSHCPTANYDKVVSGYYQEDYKF
Ga0255267_107940313300024867FreshwaterKNVIEDYLMSRTYRNLEGINKCALRHPKTSNERKNLIGILRDNAYEDYQISGINHLHHRLCNCPTANYDKVISGYYQEDYIVA
Ga0208546_1000023183300025585AqueousMSRTWRKIDYIGKCALRHPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLTNCPTANYDRVVSGYLQEDYKMI
Ga0208546_110930323300025585AqueousMSRTYRKLEGMNRCALRSPKTSNERKTLIGILQDNQYEDYQISGLNHLHHRLSHCPTANYDRVVSGYYQEDYNIA
Ga0208784_1000090423300025732AqueousMSRTYRNLEGMNRCALRSPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLSHCPTANYDRVVSGYYQEDYKV
Ga0208784_1000265273300025732AqueousMSRTFRNTEGMNRCALRHPKTSNERKNLIGLLQDNYVEEYEISGLNHLHHRLSNCPTANYDKVVSAYYEEDYKF
Ga0208784_100054723300025732AqueousMSRTYRKIDYIGKCALRHPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLSHCPTANYDKVVSGYYQEDYKTA
Ga0208784_101888343300025732AqueousMSRTYRKIDYIGKCALRHPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLSHCPTANYDRVVSGYIEEYHK
Ga0208784_102202423300025732AqueousMSRTYRNLDGINKCALRHPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLSHCPTAYYDKVVSGYYQEDYKTA
Ga0208784_102348333300025732AqueousMSRTYRNLEGINRCALRHPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLSNCPTANYDKVVSGYYQEDYKPA
Ga0208644_135476213300025889AqueousRTYRKIDYIGKCALRHPKTSNERKTLIGILQDNQYEDYSISGLNHLQHRLSNCPTANYDKVVSGYYQEDYKV
Ga0255274_118968123300026570FreshwaterLMSRTYRNLEGINKCALRHPKTSNERKNLIGILRDNAYEDYQISGINHLHHRLCNCPTANYDKVISGYYQEDYIVA
Ga0255289_103291713300026571FreshwaterKKNLQKKIIRCRIKNVIEDYLMSRTYRNLEGINKCALRHPKTSNERKNLIGILRDNAYEDYQISGINHLHHRLCNCPTANYDKVISGYYQEDYIVA
Ga0209770_1010255313300027769Freshwater LakeMSRTYRNLEGINRCALRNPKTSNERKHLIGILQDNQYEDYQVSGLNHLHHRLSNCPTANYDKVISGYYQEDYNIA
Ga0256331_112721413300028286FreshwaterRTYRKIDYIGKCALRHPKTSNERKHLIGILQDNQYEDYQISGLNHLHHRLSHCPTANYDKVVSGYYQEDYKTA
Ga0119944_1001127153300029930AquaticMSRTYRKIDYIGKCALRHPKTSNERKHLIGIIQDNQYEDYQISGLNHLQHRLSNCPTANYDRVVSGYLQEDYKF
Ga0119944_100446353300029930AquaticMSRTYRNLEGMNRCALRSPKTSNERKTLIGILQDNQYEDYPISGLNHLHHRLSHCPTANYDKVISGYYQEDYKV
Ga0119944_100468383300029930AquaticMSRTYRKIDYIGKCALRHPKTSNERKNLIGILQDNQYEDYTISGLNHLHHRLSHCPTANYDKVVSGYYQEDYKF
Ga0119944_101183743300029930AquaticMSRTYRNLDGMSRCALRHPKTSNERKSLIGLLQDNYVEEYEISGLNHIHHRLANCPTAWDDKVVSGYYQEDYKVS
Ga0315907_1019052113300031758FreshwaterALRNPKTTNERKALMSLLQDIRSEEYEISGVNHLQRRLSRCPTAWDDLIVSGYREAKI
Ga0315899_1014989063300031784FreshwaterMSRTYRKIDYIGKCALRHPKTSNERKHLIGILQDNQYEDYLISGLNHLHHRLSHCPTAWDDKVVSAYYEEDFKF
Ga0315900_1103352523300031787FreshwaterMSRTFRNTEGMNRCALRHPKTSNERKNLIGLLQDNYVEEYEISGLNHLHHRLANCPTANYDKVVSAYYEEDYKF
Ga0315909_1006925063300031857FreshwaterMARTYRNLIGMNRCALRNPRTTNERKALMSLLQDIRSEEYEISGVNHLQRRLSRCPTAWDDLIVSGYREAKI
Ga0315904_1039841643300031951FreshwaterMARTYRNLIGMNRCALRNPRTTNERKALMSLLQDIRSEEYEISGVNHLQRRLSRCPTTWDDLIV
Ga0315904_1053164423300031951FreshwaterMARTYRNLIGMNRCALRNPKTTNERKALMSLLQDIRSEEYEISGVNHLQRRLSRCPTAWDDLIVSGYREAKI
Ga0316627_10045646553300033482SoilMSRTYRNLEGMNRCALRNPKTANERKNLIGLLQDINVEEYEISGLNHLHHRLANCPTANYDKVVSGYFQEDYKII
Ga0316627_10095087223300033482SoilMARTHRNLIGINRYAFRKPKTSNERRKLISILQDNQFEEYTISGINHLHHRLSKCPTACDDIVISGYLQEDYKVS
Ga0316621_1072435123300033488SoilVIEDKTMSRTFRNTEGMNRCALRHPKTSNERKNLIGLLQDNYVEEYEISGLNHLHHRLANCPTANYDKVVSAYYEEDYKF
Ga0316621_1117526423300033488SoilMSRTYRNLEGMNRCALRNPKTANERKNLIGLLQDINVEEYEISGLNHLHHRLANCPTANYDKVVSGYFQEDYKF
Ga0316616_10142824213300033521SoilMSRTYRNLEGMNRCALRNPKTSNERKNLIGIIQDNYIEEYEISGVNHLRSRLTNCPTANYDKVIS
Ga0316617_10012312233300033557SoilMSRTYRNLEGMNRCALRNPKTSNERKNLIGIIQDNYIEEYEISGVNHLRSRLTNCPTANYDKVISAYYQESYRNQC
Ga0334987_0018727_1828_20523300034061FreshwaterMSRTYRNLEGMNRCALRNPKTSNERKSLIGLLQDINVEEYEISGLNHLHHRLSNCPTANYDKVISGYYQEDYKI
Ga0335053_0762040_1_1953300034118FreshwaterMSRTYRNLEGINRCALRNPKTSNERKHLIGILKDNQYEDYQVSGLNHLHHRLSNCPTANYDKVIS
Ga0335007_0068127_1065_12893300034283FreshwaterMSRTYRNLEGMNRCALRNPKTSNERKSLIGLLQDINVEEYEISGLNHLHHRLSNCPTANYDKVISGYYQEDYKF

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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