Metagenome / Metatranscriptome Family F104904

Basic Information
Family ID	F104904
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	100 residues
Representative Sequence	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS
Number of Associated Samples	85
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	1.00 %
% of genes from short scaffolds (< 2000 bps)	1.00 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	No

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (99.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (34.000 % of family members)
Environment Ontology (ENVO)	Unclassified (86.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (87.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 82.41% β-sheet: 0.00% Coil/Unstructured: 17.59%
Feature Viewer

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Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF06745	ATPase	15.00
PF01037	AsnC_trans_reg	14.00
PF08241	Methyltransf_11	11.00
PF00881	Nitroreductase	2.00
PF00005	ABC_tran	2.00
PF00528	BPD_transp_1	2.00
PF13426	PAS_9	1.00
PF04075	F420H2_quin_red	1.00
PF01243	Putative_PNPOx	1.00

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
All Organisms	root	All Organisms	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
cellular organisms	root	All Organisms → cellular organisms	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.00 %

Visualization

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Scaffold	Taxonomy	Length	IMG/M Link
3300005178\|Ga0066688_10483871	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	99.00%
Loam	Environmental → Terrestrial → Soil → Loam	1.00%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	52.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.00%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	34.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	34.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	18.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.00%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010080	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010099	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010104	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010108	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010120	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010128	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010134	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010136	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010142	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012379	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012389	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_101103421	3300002558	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLXPNIRSLGLFTGAIIGLIIGVLALIGASRVSSPVWTIILMVLGYLVGSLGGILIFIGALIGLVTALVKS*
JGI25383J37093_100020539	3300002560	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLAPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVGSLGGILIFIGALIGLVTALVKS*
JGI25384J37096_100002935	3300002561	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLAPNIRSLGLFTGAIIGLIIGVLALIGASRVSSPVWTIILMVLGYLVGSLGGILIFIGALIGLVTALVKS*
JGI25382J43887_100033331	3300002908	Grasslands Soil	LGSVLQIVGSRSILDLAPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVGSLGGILIFIGALIGLVTALVKS*
JGI25390J43892_100170051	3300002911	Grasslands Soil	VGSRSILDLAPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVGSLGGILIFIGALIGLVTALVKS*
Ga0066683_102166083	3300005172	Soil	PLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0066683_108173141	3300005172	Soil	MSLHAPLRSLARALILVGGVVLILGSLLQIVGSRSILDLTPNIRSLGYFTGALIGLIIGILALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGSLIGLVTALVKS*
Ga0066673_100605062	3300005175	Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0066688_104838712	3300005178	Soil	LILVGGVVLILGSVLQIVGSRSILDLAPNIRSLGLFTGAIIGLIIGVLALIGASRVSSPVWTIILMVLGYLVGSLGGILIFIGALIGLVTALVKS*
Ga0066685_103280021	3300005180	Soil	MSLHAPLRSLARALILVGGVVLILGSLLQIVGSRSTLDLTPNIRSLGYFTGALIGLIIGILALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGSLIGLVTALVKS*
Ga0066685_108883611	3300005180	Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSTLDLTPNIRSLGLFTGAIIGLIIGVLALIGASQISSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0066675_109242901	3300005187	Soil	MSLHAPLRSLARALILVGGIVLILGSVLQIIGSRSILDLTPNIRSLGLFTGGIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0066701_100206202	3300005552	Soil	LVGGVVLILGSVLQIVGSRSILDLAPNIRSLGLFTGAIIGLIIGVLALIGASRVSSPVWTIILMVLGYLVGSLGGILIFIGALIGLVTALVKS*
Ga0066707_100936503	3300005556	Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0066670_100033002	3300005560	Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLVIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0066706_101282783	3300005598	Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALLKS*
Ga0066651_106615652	3300006031	Soil	MSLHAPLRSLARALILVGGIVLILGSVLQIIGSRSILDLTPNIRSLGLFTGGIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGAL
Ga0066651_108203381	3300006031	Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSSGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0066696_100014132	3300006032	Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0066656_105290422	3300006034	Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALLKS*
Ga0066652_1005124093	3300006046	Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSSGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKN*
Ga0066653_100571643	3300006791	Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSSGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVK
Ga0066665_109229541	3300006796	Soil	LILVGGIVLILGSVLQIIGSRSILDLTPNIRSLGLFTGGIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0066710_1029368681	3300009012	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILI
Ga0066709_1005077813	3300009137	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSLLQIVGSRSILDLTPNIRSLGLFTGALIGLIIGVLALMGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0066709_1013441082	3300009137	Grasslands Soil	LILVGGIVLILGSVLQIIGSRSILDLTPNIRSLGLFTGGIIGLIIGVLALIGASQISSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0127448_1332831	3300010080	Grasslands Soil	MSLHAPLRSLARALILVGGIVLILGSVLQIIGSRSILDLTPNIRSLGLFTGGIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIG
Ga0127450_10984762	3300010099	Grasslands Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSSGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKN*
Ga0127446_10331902	3300010104	Grasslands Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSSGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0127474_10152572	3300010108	Grasslands Soil	SLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0127451_10575582	3300010120	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSSGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLITALVKS*
Ga0127486_11102251	3300010128	Grasslands Soil	LEWSGMSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0127484_11527141	3300010134	Grasslands Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSSGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIF
Ga0127447_11356911	3300010136	Grasslands Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKN*
Ga0127483_10415332	3300010142	Grasslands Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVK
Ga0134082_105325731	3300010303	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLVIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTA
Ga0134109_100944732	3300010320	Grasslands Soil	MSLHAPLRSLARALILVGGIVLILGSVLQIIGSRSILDLTPNIRSLGLFTGGIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALLKS*
Ga0134084_100060962	3300010322	Grasslands Soil	MSLHAPLRSLARALILVGGIVLILGSVLQIIGSRSILDLTPNIRSSGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0134111_101069252	3300010329	Grasslands Soil	MSLHAPLRSLARALILVGGIVLILGSVLQIIGSRSILDLTPNIRSLGLFTGGIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVK
Ga0134080_102863471	3300010333	Grasslands Soil	QIVGSRSILDLTPNIRSLGYFTGALIGLIIGILALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGSLIGLVTALVKS*
Ga0134080_103015372	3300010333	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLVIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKN*
Ga0134063_101027961	3300010335	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSLLQIVGSRSTLDLTPNIRSLGYFTGALIGLIIGILALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0137364_102142312	3300012198	Vadose Zone Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLVIGVHAVIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0137365_102878831	3300012201	Vadose Zone Soil	MSLHAPLRSLARALILVGGIVLILGSVLQIIGSRSILDLTPNIRSLGLFTGGIIGLIIGVLALIGASQISSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0137365_110984632	3300012201	Vadose Zone Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLIIGVLALIGASQISSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0137374_101787693	3300012204	Vadose Zone Soil	MAQRQALHSLARVLIFVGGVILLIGAILQLIDVRSLLDLTPNVRSLSLFSSALIGIIVGILALVGASQVSSAVWCVILMVLGYLVGSIGGILIFIGALIGLVATLVKS*
Ga0137380_102836093	3300012206	Vadose Zone Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNLRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSRLGGILIFIGALIGLVTALVKS*
Ga0137380_115420451	3300012206	Vadose Zone Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVGSLGGILIFIGALIGLVTALVKS*
Ga0137381_116016211	3300012207	Vadose Zone Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGAL
Ga0137378_111208862	3300012210	Vadose Zone Soil	MTQLQALHSLARALILVGGIVLLIGAILQVIDVRSLLDLTPNVRSLSLFSSALIGILVGILALIGSTQVSSAVWCIILMVLGYLVRSLGGILVFIGALIGLVATLVKT*
Ga0137377_105282752	3300012211	Vadose Zone Soil	LVGGVVLILGSVLQIVGSRSILDLAPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVGSLGGILIFIGALIGLVTALVKS*
Ga0137387_111280971	3300012349	Vadose Zone Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVGSLG
Ga0137386_112004011	3300012351	Vadose Zone Soil	SLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNLRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSRLGGILIFIGALIGLVTALVKS*
Ga0137367_100374421	3300012353	Vadose Zone Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0137384_107841752	3300012357	Vadose Zone Soil	SGMSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0134022_11492312	3300012371	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGGIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0134058_10901282	3300012379	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSIIDLTPNIRSLGLFTGAIIGLVIGVLALIGASQVSSPAWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0134040_11996452	3300012389	Grasslands Soil	MWLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALLKS*
Ga0134043_13219281	3300012392	Grasslands Soil	MSLHAPLRSLARALILVGGIVLILGSVLQIIGSRSILDLTPNIRSLGLFTGGIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKN*
Ga0134052_11656792	3300012393	Grasslands Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLIIGVLALIGASRVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0134048_11851714	3300012400	Grasslands Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSSGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLV
Ga0134049_11063793	3300012403	Grasslands Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVK
Ga0134077_101266401	3300012972	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSLLQIVGSRSILDLTPNIRSLGYFTGALIGLIIGILALIGASQVSSPVWTIILMVLGYLVSSLGGILIFI
Ga0134110_104099091	3300012975	Grasslands Soil	GVVLILGSLVQIVGSRSILDLTPNIRSLGYFTGALIGLIIGILALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGSLIGLVTALVKS*
Ga0134076_101030551	3300012976	Grasslands Soil	GSLVQIVGSRSILNLTPNIRSLGYFTGALIGLIIGILALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGSLIGLVTALVKS*
Ga0134087_100137064	3300012977	Grasslands Soil	MSLHAPLRSLARALILVGGIVLILGSVLQIIGSRSILDLTPNIRSLGLFTGGIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKT*
Ga0134073_102605441	3300015356	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAMIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKT*
Ga0134072_1000011011	3300015357	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSLLQIVGSRSILDLTPNIRSLGYFTGALIGLIIGILALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0134085_101095783	3300015359	Grasslands Soil	APLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS*
Ga0134074_10285063	3300017657	Grasslands Soil	LVGGIVLILGSVLQIIGSRSILDLTPNIRSLGLFTGGIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS
Ga0134074_10702323	3300017657	Grasslands Soil	VLQIVGSRSTLDLTPNIRSLGLFTGAIIGLIIGVLALIGASQISSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS
Ga0134074_12345281	3300017657	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSSGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS
Ga0134083_100329321	3300017659	Grasslands Soil	VLILGSLLQIVGSRSILDLTPNIRSLGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS
Ga0066655_114160901	3300018431	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVK
Ga0066667_100124562	3300018433	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLAPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVGSLGGILIFIGALIGLVTALVKS
Ga0066667_122103321	3300018433	Grasslands Soil	RSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALLKS
Ga0066662_110643712	3300018468	Grasslands Soil	LILGSVLQIVGSRSILDLAPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVGSLGGILIFIGALIGLVTALVKS
Ga0066669_107224822	3300018482	Grasslands Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS
Ga0066669_110871732	3300018482	Grasslands Soil	MSLHAPLRSLARALILVGGIVLILGSVLQIIGSRSILDLTPNIRSLGLFTGGIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVT
Ga0209350_10064325	3300026277	Grasslands Soil	LVGGVVLILGSVLQIVGSRSILDLAPNIRSLGLFTGAIIGLIIGVLALIGASRVSSPVWTIILMVLGYLVGSLGGILIFIGALIGLVTALVKS
Ga0209235_10826073	3300026296	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLAPNIRSLGLFTGAIIGLIIGVLALIGASRVSSPVWTIILMVLGYLVGSLGGILIFIGALIGLVTALVKS
Ga0209237_10118547	3300026297	Grasslands Soil	VLQIVGSRSILDLAPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVGSLGGILIFIGALIGLVTALVKS
Ga0209236_10145808	3300026298	Grasslands Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLIIGVLALIGASRVSSPVWTIILMVLGYLVGSLGGILIFIGALIGLVTALVKS
Ga0209468_10022745	3300026306	Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSSGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS
Ga0209469_10002636	3300026307	Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSSGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKN
Ga0209469_11170262	3300026307	Soil	MSLHAPLRSLARALILVGGIVLILGSVLQIIGSRSILDLTPNIRSLGLFTGGIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS
Ga0209472_10564633	3300026323	Soil	MSLHAPLRSLARALILVGGIVLILGSVLQIVGSRSILDLTPNIRSSGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS
Ga0209472_11530261	3300026323	Soil	MSLHAPLRSLARALILVGGIVLILGSVLQIIGSRSILDLTPNIRSLGLFTGGIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTAL
Ga0209470_10058627	3300026324	Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALLKS
Ga0209470_11231062	3300026324	Soil	MSLHAPLRSLARALILVGGVVLILGSLLQIVGSRSTLDLTPNIRSLGYFTGALIGLIIGILALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGSLIGLVTALVKS
Ga0209801_11174132	3300026326	Soil	LVGGVVLILGSVLQIVGSRSILDLAPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVGSLGGILIFIGALIGLVTALVKS
Ga0209266_12709421	3300026327	Soil	MSLHAPLRSLARALILVGGVVLILGSLLQIVGSRSILDLTPNIRSLGYFTGALIGLIIGILALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGSLIGLVTALVKS
Ga0209057_10208443	3300026342	Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALLKS
Ga0209378_10530763	3300026528	Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLAPNIRSLGLFTGGIIGLIIGVLALIGASQISSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS
Ga0209058_10069603	3300026536	Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGALIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS
Ga0209157_10042326	3300026537	Soil	LVGGVVLILGSLLQIVGSRSILDLTPNIRSLGYFTGALIGLIIGILALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGSLIGLVTALVKS
Ga0209056_103979002	3300026538	Soil	LILVGGIVLILGSVLQIIGSRSILDLTPNIRSLGLFTGGIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS
Ga0209376_10419512	3300026540	Soil	MSLHAPLRSLARALILVGGVVLILGSLLQIVGSRSILDLTPNIRSLGYFTGALIGLIIGILALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS
Ga0209376_12441872	3300026540	Soil	MSLHAPLRSLARALILVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLIIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS
Ga0209474_100892152	3300026550	Soil	LVGGVVLILGSVLQIVGSRSILDLTPNIRSLGLFTGAIIGLVIGVLALIGASQVSSPVWTIILMVLGYLVSSLGGILIFIGALIGLVTALVKS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F104904

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences