Metagenome Family F104732

Basic Information
Family ID	F104732
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	47 residues
Representative Sequence	MTIDLTRDEIWFLKALRAAGERGRIVSAFASNAGLARLVEVQY
Number of Associated Samples	73
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	20.00 %
% of genes near scaffold ends (potentially truncated)	33.00 %
% of genes from short scaffolds (< 2000 bps)	35.00 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (92.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.000 % of family members)
Environment Ontology (ENVO)	Unclassified (67.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.000 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74. 1AF_2010_repII_A001DRAFT_100347031 2AF_2010_repII_A10DRAFT_10256851 3Ga0066388_1024443231 4Ga0066388_1038316852 5Ga0066903_1069873392 6Ga0066903_1080237371 7Ga0066903_1084180512 8Ga0079221_111496143 9Ga0073928_106299571 10Ga0126380_114472062 11Ga0126382_108992672 12Ga0126373_107841854 13Ga0126373_122121151 14Ga0126370_101748401 15Ga0126370_109829311 16Ga0126378_120681841 17Ga0126381_1018515562 18Ga0126383_106654743 19Ga0137362_107114931 20Ga0137370_109003722 21Ga0126369_103251775 22Ga0126369_114439733 23Ga0182041_117452932 24Ga0182033_102551001 25Ga0182035_106760773 26Ga0182035_112646191 27Ga0182032_102597861 28Ga0182034_115636082 29Ga0182039_110680133 30Ga0182038_108720501 31Ga0182038_118460781 32Ga0187802_101563792 33Ga0187816_103771753 34Ga0187804_101772551 35Ga0187805_100788733 36Ga0210403_101960201 37Ga0126371_126022662 38Ga0207758_10202321 39Ga0207840_10278241 40Ga0209073_101717843 41Ga0318541_104334561 42Ga0318538_105502911 43Ga0318573_103335701 44Ga0310915_108576862 45Ga0306917_103044501 46Ga0306917_105216411 47Ga0306917_106235881 48Ga0306917_106610691 49Ga0306918_100384784 50Ga0306918_105034121 51Ga0306918_107449091 52Ga0318494_107026151 53Ga0318494_108542692 54Ga0318509_106316212 55Ga0318498_102897792 56Ga0318566_102442961 57Ga0318547_101414653 58Ga0318529_105041652 59Ga0318557_102505272 60Ga0310917_106826071 61Ga0318495_104233531 62Ga0306919_101062666 63Ga0306925_107852101 64Ga0306925_110930423 65Ga0306925_115693061 66Ga0318522_100180114 67Ga0318551_107440672 68Ga0318520_101385901 69Ga0306923_104724574 70Ga0306923_105538884 71Ga0306923_109589653 72Ga0306923_111710523 73Ga0306921_104055883 74Ga0306921_113549931 75Ga0306921_121272972 76Ga0310912_110606502 77Ga0310912_113097901 78Ga0310913_102116993 79Ga0310910_101692673 80Ga0310909_103070281 81Ga0318530_103982762 82Ga0306922_105967211 83Ga0306922_115282421 84Ga0306922_120003121 85Ga0318569_102600041 86Ga0318556_106917382 87Ga0318532_101064581 88Ga0318533_106918451 89Ga0318504_105810562 90Ga0318510_104538312 91Ga0318524_107580212 92Ga0306924_109059382 93Ga0306924_121215821 94Ga0307471_1016354701 95Ga0306920_1003830535 96Ga0306920_1037748142 97Ga0335081_124799291 98Ga0310914_108979392 99Ga0318519_106112451 100Ga0318519_107903901
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74. 1AF_2010_repII_A001DRAFT_100347031 2AF_2010_repII_A10DRAFT_10256851 3Ga0066903_1084180512 4Ga0073928_106299571 5Ga0126369_114439733 6Ga0182038_108720501 7Ga0187802_101563792 8Ga0187805_100788733 9Ga0310915_108576862 10Ga0318494_108542692 11Ga0318498_102897792 12Ga0318557_102505272
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42. 1Ga0318509_106316212 2AF_2010_repII_A001DRAFT_100347031 3Ga0066903_1069873392 4Ga0079221_111496143 5Ga0126382_108992672 6Ga0126373_122121151 7Ga0126378_120681841 8Ga0126381_1018515562 9Ga0137362_107114931 10Ga0137370_109003722 11Ga0182035_106760773 12Ga0182034_115636082 13Ga0187802_101563792 14Ga0187805_100788733 15Ga0207840_10278241 16Ga0318498_102897792 17Ga0318557_102505272 18Ga0310913_102116993 19Ga0318532_101064581 20Ga0335081_124799291 21Ga0318519_107903901
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.07% β-sheet: 0.00% Coil/Unstructured: 54.93%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF03401	TctC	13.00
PF01145	Band_7	4.00
PF01165	Ribosomal_S21	3.00
PF13649	Methyltransf_25	2.00
PF08241	Methyltransf_11	1.00
PF00313	CSD	1.00
PF07690	MFS_1	1.00
PF02657	SufE	1.00
PF07369	DUF1488	1.00
PF05694	SBP56	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	13.00
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	3.00
COG1912	Stereoselective (R,S)-S-adenosylmethionine hydrolase (adenosine-forming)	Defense mechanisms [V]	1.00
COG2166	Sulfur transfer protein SufE, Fe-S cluster assembly	Posttranslational modification, protein turnover, chaperones [O]	1.00

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	8.00 %
Unclassified	root	N/A	92.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	8.00 %
Unclassified	root	N/A	92.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.00 %
Unclassified	root	N/A	92.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	7.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.00 %
Unclassified	root	N/A	92.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.00 %
Unclassified	root	N/A	92.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.00 %
Unclassified	root	N/A	92.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_102444323	Not Available	948	Open in IMG/M
3300005332\|Ga0066388_103831685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300005764\|Ga0066903_106987339	Not Available	585	Open in IMG/M
3300006804\|Ga0079221_11149614	Not Available	598	Open in IMG/M
3300010043\|Ga0126380_11447206	Not Available	606	Open in IMG/M
3300010047\|Ga0126382_10899267	Not Available	766	Open in IMG/M
3300010048\|Ga0126373_10784185	Not Available	1014	Open in IMG/M
3300010361\|Ga0126378_12068184	Not Available	649	Open in IMG/M
3300010376\|Ga0126381_101851556	Not Available	871	Open in IMG/M
3300010398\|Ga0126383_10665474	Not Available	1117	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	5.00%
Terrestrial	Environmental → Terrestrial	95.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	4.00%
Soil	Environmental → Terrestrial → Soil	95.00%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.00%

Habitat	Taxonomy	Distribution
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.00%
Loam	Environmental → Terrestrial → Soil → Loam	7.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.00%

Habitat	Taxonomy	Distribution
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	71.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.00%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.00%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.00%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.00%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M

Showing 1 to 10 of 73 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_100347031	3300000793	Forest Soil	MTFDLTRDEIWFLKALRAAGERGRTVSAPASRAGLIHLVEVQYV
AF_2010_repII_A10DRAFT_10256851	3300000816	Forest Soil	MTTYLTRDEIWFLKALRAAGGRGRLVSAPASRTGLT
Ga0066388_1024443231	3300005332	Tropical Forest Soil	MTIDMTRDEIWFLKALRAAGERGRIVSALASNAGLARLVEVQYV
Ga0066388_1038316852	3300005332	Tropical Forest Soil	MSIDLTRDEIWFLKALRAAGERGRAVSAPASRAGLARLVEVQYVTQHP
Ga0066903_1069873392	3300005764	Tropical Forest Soil	TIDLTRDEVWFLKALRAAGERGRIVSAPASRAGLAHLVEDST*
Ga0066903_1080237371	3300005764	Tropical Forest Soil	MTIDLTRDEVWFLKALRAAGERGRIVSAPASRAGLAHLVEVQ
Ga0066903_1084180512	3300005764	Tropical Forest Soil	MTIDLTRDEIWFLKALRAAGERGRIVSALASNAGLARLVEVQDVTKQLQSERTTLLH*
Ga0079221_111496143	3300006804	Agricultural Soil	MTICLTRDEIWFLKALRAAGERGRLVSAPASRTGLTRLVEVQYVAKHPQ
Ga0073928_106299571	3300006893	Iron-Sulfur Acid Spring	MIIDLSRDEIWFLKALRAAGEHGRIVRASSYHLGLARLVEERYVTEHAVNANAVL
Ga0126380_114472062	3300010043	Tropical Forest Soil	MTFDLTRDEIWFLKALRAAGERGRIVSAPASRAGLNHLVEVQYVTEHP
Ga0126382_108992672	3300010047	Tropical Forest Soil	MTCDLTRDEIWFLKALRAAGVRGRIVSAPSSRAGLNHLVE
Ga0126373_107841854	3300010048	Tropical Forest Soil	MTIDLTRDEIWFLKALRAAGGRGRIVSAFASNAALARLVEVQYVIGQPQSERKT
Ga0126373_122121151	3300010048	Tropical Forest Soil	MIIDLSRDEIWFLKALRAAGERGRLVSAPTSRAGLAHLVEVQYVT
Ga0126370_101748401	3300010358	Tropical Forest Soil	MTDNLTRDEIWFLKALRAAGERGRIVSAPASRAGLAHLVE
Ga0126370_109829311	3300010358	Tropical Forest Soil	MTMDLTRGEIWFLKALRAAGERGRIVSAPASRNGLAHLVEAHY
Ga0126378_120681841	3300010361	Tropical Forest Soil	MTIDLTRDEIWFLKALRAAGERGRIVSAAASIVGLIRLVEA*
Ga0126381_1018515562	3300010376	Tropical Forest Soil	MTMDLTRDEIWFLKALRAAGERGRVVSAPASRNGLAHLVEAHY
Ga0126383_106654743	3300010398	Tropical Forest Soil	MTIDMTRDKIWFLKALRAAGERGRIVSAFASNTGLVRLVEVQYVTKQPQSERKTL*
Ga0137362_107114931	3300012205	Vadose Zone Soil	MIIDLTRDEIWFMKALRAAGEHGRIVRASSYRLGLARLVEERYATEHAV
Ga0137370_109003722	3300012285	Vadose Zone Soil	MTIDLTRDEIWFLKALRVAGERGRIVSAPASRAGLAHLVEVHYVTEHPQNE
Ga0126369_103251775	3300012971	Tropical Forest Soil	MTIDLTRDEIWFLKALRAAGERGRIVSAFASDAGLARLVEMQYVT
Ga0126369_114439733	3300012971	Tropical Forest Soil	MDLTRDEIWFLKALRAAGERGRIVSAPASRNGLAHLVEAHYVTEHPQSERK
Ga0182041_117452932	3300016294	Soil	MTIDLTRDEIWLLKALRAAGERGRIVSALVSQAGLAHLVEVQYV
Ga0182033_102551001	3300016319	Soil	MTTDLTRDEIWFLKALRAAGGRGRIVSAFASNAALARL
Ga0182035_106760773	3300016341	Soil	MTIDLTRDEIWLLKALRAAGERGRIVSALVSQAGLAHLVEVQYVTKQPQSERKTLY
Ga0182035_112646191	3300016341	Soil	MTIYLTRDEIWFLKALRAAGERGRLVSAPASRTGLTRLVEVQYVAKHPQS
Ga0182032_102597861	3300016357	Soil	MTFDLTRDEIWFLKALRAAGERGRIVSALASRAGLNHLVEIQYVTEHPQS
Ga0182034_115636082	3300016371	Soil	MTIDLTRDEIWFLKALRAAGEHGRTVSAPASRAGLAR
Ga0182039_110680133	3300016422	Soil	MIIDLTRDEIWFLKALRAAGERGCIVSAFASNAGLARLVEMQYVTKQPQSERK
Ga0182038_108720501	3300016445	Soil	MIIDLTRDEIWFLKALRAAGERGRIVSAFASNAGLARLV
Ga0182038_118460781	3300016445	Soil	MTIDMTRDEIWFLKALRAAGERGRIVSALASRAGLARLVEVQYVTQHPQSE
Ga0187802_101563792	3300017822	Freshwater Sediment	MTIDLTRDEIWFLKALRAAGERGRIISALASQAGLGRLVEVRYVTKQPQSERKTLYALLIVADRF
Ga0187816_103771753	3300017995	Freshwater Sediment	MTIDLTRDEIWFLQALRAAGERGRIVSAFACNAGLARLVEVKYVTKQP
Ga0187804_101772551	3300018006	Freshwater Sediment	MTFDLNRDEIWFLKALRAAGERGRTVSSPASQAALDRLVALQYV
Ga0187805_100788733	3300018007	Freshwater Sediment	MTFDLTRDEIWFLKALRAAGERGRTVSSPASQAALDRLVALQYVAKQERTEDAVHYY
Ga0210403_101960201	3300020580	Soil	MTFDLTRDEIWFLKALRAAGERGRIVSAPASRAGLNHLVEVQY
Ga0126371_126022662	3300021560	Tropical Forest Soil	MAFDLTRDEIWFLKALRAAGERGRIVSAPASRAGLNHLVEVQYVTEHPQSERR
Ga0207758_10202321	3300026895	Tropical Forest Soil	MTIDLTRDEIWFLKALRAAGERGRIVSAFASNAGLARLVEVQYVTKQPQSERK
Ga0207840_10278241	3300026910	Tropical Forest Soil	MTIDLTRDEIWFLKALRAAGGRGRTVSAAASRAGARP
Ga0209073_101717843	3300027765	Agricultural Soil	MIIDLSRDEIWFLKALRAAGERGRIVSAPTSRAGLAHLVEVQYVREHP
Ga0318541_104334561	3300031545	Soil	MTIDLTRDEIWFLKALRAAGERGRAVSAPASRAGLARLVEVQY
Ga0318538_105502911	3300031546	Soil	MTIYLTRDEIWFLKALRAAGERGRLVSAPASRTGLTRLVEVQYVAKHPQSDRKTLY
Ga0318573_103335701	3300031564	Soil	MTIYLTRDEIWFLKALRAAGERGRLVSAPASRTGLTRLVEVQYVAKHPQSERKTLYII
Ga0310915_108576862	3300031573	Soil	MVVQHDLSCLMTFDLTRDEIWFLKALRAAGERGRIVSAPTSRAGLAHLVEVQYVTEH
Ga0306917_103044501	3300031719	Soil	MTIDLTRDEIWFLKALRAAGERGRIVNAPASRAGLARLVE
Ga0306917_105216411	3300031719	Soil	MTIDLTRDEIWFLKPLRAAGERGRIVSAFASNAGLARLVEMQYVTKQPQSE
Ga0306917_106235881	3300031719	Soil	MVVQHDLSCLMTFDLTRDEIWFLKALRAAGERGRIVSAPTSRAGLAHLVEVQYVTEHP
Ga0306917_106610691	3300031719	Soil	MTIDLTRDEIWFLKALRAAGERGRIVSALASQAGFARLVDVQYVTKQPQSERK
Ga0306918_100384784	3300031744	Soil	MTMDLTRDEIWFLKALRAAGERGRIVSAPASRNGLAYLVEAH
Ga0306918_105034121	3300031744	Soil	MIIDLTRDEIWFLKALRAAGERGRIVSAFASNAGLARLVEMQYVTKQPQS
Ga0306918_107449091	3300031744	Soil	MTIDLTRDEIWLLKALRAAGERGRIVSALVSQAGLAHLVE
Ga0318494_107026151	3300031751	Soil	MTIDLTRDEIWFLKALRAAGERGRIVSAPASRAGLAHLVEMQYVTEHPQSERK
Ga0318494_108542692	3300031751	Soil	MGYLMTTDFTRDEIWFLKALRAAGDRGRIVRAPASRAGLAHLVEV
Ga0318509_106316212	3300031768	Soil	MTIDLTRDEIWFLKALRAAGERGRIVSAFASNAGLARLVEVQY
Ga0318498_102897792	3300031778	Soil	MTIDLTRDEIWLLKALRAAGTRGRIVSAQASRAALTRLVEVQFVTTHPQSERK
Ga0318566_102442961	3300031779	Soil	MTIDLTRDEIWLLKALRAAGTRGRIVSAQASRAALTRLVEVQFVTTHPQSERKTLYVI
Ga0318547_101414653	3300031781	Soil	MTIDLTRDEIWFLKALRAAGERGRIVSALASQAGFARLVDVQYVTRRPQSER
Ga0318529_105041652	3300031792	Soil	MTIYLTRDEIWFLKALRAAGERGRLVSAPASRTGLTRLVEVQYVAKHPQSARKT
Ga0318557_102505272	3300031795	Soil	VGFDLIRDEIWFLKALRAAGERGRTVSSSESRAGLARLVLLQYVTE
Ga0310917_106826071	3300031833	Soil	MTIDMTRDEIWFLKALRAAGERGRIVSALASRAGLARLVEVQYVT
Ga0318495_104233531	3300031860	Soil	MTIDLTRDEIWLLKALRAAGTRGRIVSAQASRAALTRLVEVQFVT
Ga0306919_101062666	3300031879	Soil	MTIDLTRDEIWFLKPLRAAGERGRIVSAFASNAGLARLVEMQY
Ga0306925_107852101	3300031890	Soil	MTIDLTRDEIWLLKALRAAGERGRIVSALVSQAGLAHLVEVQYVTKQPQSER
Ga0306925_110930423	3300031890	Soil	MTIDLTRDEIWFLKPLRAAGERGRIVSAFASNAGLARLVEMQYVTKQPQSER
Ga0306925_115693061	3300031890	Soil	MTIDMTRDEIWFLKALRAAGERGRIVSALASRAGLARLVEFQYVTQHPQSERKT
Ga0318522_100180114	3300031894	Soil	MTFDLTRDEIWFLKALRAAGERGRTVSAPASRAGLNHLVEVQYVT
Ga0318551_107440672	3300031896	Soil	VGFDLIRDEIWFLKALRAAGERGRTVSSSESRAGLARLV
Ga0318520_101385901	3300031897	Soil	MTIDLTRDEIWFLKALRAAGERGRIVSALASQAGFARLVDVQYVTRR
Ga0306923_104724574	3300031910	Soil	MTMDLTRDEIWFLKALRAAGERGRIVSAPASRNGL
Ga0306923_105538884	3300031910	Soil	MIIDLTRDEIWFLKALRAAGERGRIVSAFASNAGLARLVEMQYVT
Ga0306923_109589653	3300031910	Soil	MTIYLTRDEIWFLKALRAAGERGRLVSAPASRTGLTRLVEVQYV
Ga0306923_111710523	3300031910	Soil	MTIDLTRDEIWFLKPLRAAGERGRIVSAFASNAGLARLVEMQYVTKQPQ
Ga0306921_104055883	3300031912	Soil	MVVQHDLSCLMTFDLTRDEIWFLKALRAAGERGRIVSAPTSRAGLAHLVEVQY
Ga0306921_113549931	3300031912	Soil	MTIDLTRDEIWLLKALRAAGERGRIVSALVSQAGLAHLVEVQY
Ga0306921_121272972	3300031912	Soil	MTIDLSRDEIWFLKALRAAGERGRIVSAPSRAGLAHLVEVQYVTKHAQSERKALYM
Ga0310912_110606502	3300031941	Soil	MIIDLTRDEIWFLKALRAAGERGRIVSAFASNAGLARLVEMQYVTKQPQSERK
Ga0310912_113097901	3300031941	Soil	MTIDLTRDEIWFLKALRAAGERGRIVSAFASTAGLARLVEAQYVIKQPQSERKTL
Ga0310913_102116993	3300031945	Soil	MTIDLTRDEIWFLKALRAAGERGRIVSTLASRAGLARLMPR
Ga0310910_101692673	3300031946	Soil	MTIDLTRDEIWFLKALRAAGERGRIVSAAASIVGLIRLVE
Ga0310909_103070281	3300031947	Soil	MTIDLTRDEIWFLKALRAAGERGRIVSTLASRAGLA
Ga0318530_103982762	3300031959	Soil	MIIDLTRDEIWFLKALRAAGERGRIVSAFASNAGLV
Ga0306922_105967211	3300032001	Soil	MGYLMTTDFTRDEIWFLKALRAAGDRGRIVRAPASRAGLAHLVEVQYVTEHPQS
Ga0306922_115282421	3300032001	Soil	MTIDLTRDEIWFLKPLRAAGERGRIVSAFASNAGLARLVEMQYVTKQ
Ga0306922_120003121	3300032001	Soil	MTFDLTRDEIWFLKALRAAGERGRIVSALASRAGLNHLVEIQYVTEHPQSERRT
Ga0318569_102600041	3300032010	Soil	MTIDLTRDEIWFLKALRAAGERGRIVSALASQAGFARLVDVQYV
Ga0318556_106917382	3300032043	Soil	MTIDLTRDEIWFLKPLRAAGERGRIVSAFASNAGLARLVEM
Ga0318532_101064581	3300032051	Soil	MTFNLTRDEIWFLKAPRAAGERGRIVSALASRAGLNHLVEIQYVTEHPQSERRTLYI
Ga0318533_106918451	3300032059	Soil	MVVQHDLSCLMTFDLTRDEIWFLKALRAAGERGRIVSAPTSRAGLAHLV
Ga0318504_105810562	3300032063	Soil	MTIDLTRDEIWFLKPLRAAGERGRIVSAFASNAGLARLVEVQYVTKHLQSERKT
Ga0318510_104538312	3300032064	Soil	MTIYLTRDEIWFLKALRAAGERGRLVSAPASRTGLTRLVEVQ
Ga0318524_107580212	3300032067	Soil	MTIDLTRDEIWLLKALRAAGTRGRIVSAQASRAAL
Ga0306924_109059382	3300032076	Soil	MTIDLTRDEIWFLKALRAAGGRGRIVSAFASNAGLARLVEVQYITKQPQSERKTLAPQ
Ga0306924_121215821	3300032076	Soil	MTIDLTRDEIWFLKARAAGGPGRIVSAFASNAGLARLVEVQYI
Ga0307471_1016354701	3300032180	Hardwood Forest Soil	MTIDLTRDEIWFLQALRAAGERGRIVSAFACNAGLARLVEVQYVTKQP
Ga0306920_1003830535	3300032261	Soil	MTIDLTRDEIWFLKPLRAAGERGRIVSAFASNAGLARLVEMQYVTKQPQS
Ga0306920_1037748142	3300032261	Soil	MTIDLTRDEIWFLKALRAAGERGRIVSAFASNAGLARLVEEQYVTKQL
Ga0335081_124799291	3300032892	Soil	MTIDLTRDEVWFLKALRAAGEHGRIVRASAYRVGLARLVEERYVTEHAVN
Ga0310914_108979392	3300033289	Soil	MTIDLTRDEIWFLKALRAAGERGRIVSAFASTAGLARLVEAQYVIKQPQSERKT
Ga0318519_106112451	3300033290	Soil	MTFDLTRDEIWFLKALRAAGERGRTVSAPASRAGLNHLVEVQYVTEHP
Ga0318519_107903901	3300033290	Soil	MGYLMTTDFTRDEIWFLKALRAAGDRGRIVRAPASRAGLAHLVEVQYVT

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F104732

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences